prot_Ecto-sp13_S_contig12483.2062.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12483.2062.1
Unique Nameprot_Ecto-sp13_S_contig12483.2062.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length250
Homology
BLAST of mRNA_Ecto-sp13_S_contig12483.2062.1 vs. uniprot
Match: D7G6T5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T5_ECTSI)

HSP 1 Score: 331 bits (848), Expect = 1.650e-111
Identity = 185/259 (71.43%), Postives = 197/259 (76.06%), Query Frame = 0
Query:    1 MKIAYIILTALTIGMLKYRPSLKASYDASLDRFRLWMHGIVPSFVLAVIVQIWENLLGKRYSLPGVIRFAWNFSQVLEPLAVVPQLLVFRGSTDAGRLGWTYVTLMGAYRALYILNWVYRSYNEYGYRHHPLVYAAGIVQTGMYLMFLVDRRVRSSPHLPPDAAGDVDIMEPTSSARERLLPDQDT-------RERGLDGEVRGRKLSGAADAASVTSRRGRHQQSEETVSKIESVLSRERGQGQPSLHAM--NAAEDT 250
            MK+ +IILTALTIGM KYRPSLKASYDASL                              YS   ++ F W FS+VLEPLA+VPQLLVFRGSTDAGRL WTYVTLMGAYRA YILNWVYRS+ EYGY HHPLVYAAGI+QTGMYLMFLVDR VR SPHLPPD  GDVDIMEPTSSARERLLPDQDT       RERGLDGEV GRKLSG ADAAS TSRRG HQ+ +ETVSKIESVLSRERGQG+ S+HA   NAAEDT
Sbjct:   28 MKVVFIILTALTIGMFKYRPSLKASYDASLP-----------------------------YSQTSLVNFLWTFSEVLEPLALVPQLLVFRGSTDAGRLAWTYVTLMGAYRAFYILNWVYRSHYEYGYIHHPLVYAAGIIQTGMYLMFLVDRGVRVSPHLPPDETGDVDIMEPTSSARERLLPDQDTDTEPSRNRERGLDGEVHGRKLSGVADAASATSRRGEHQRGDETVSKIESVLSRERGQGR-SVHASGKNAAEDT 256          
BLAST of mRNA_Ecto-sp13_S_contig12483.2062.1 vs. uniprot
Match: D7FRR1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR1_ECTSI)

HSP 1 Score: 214 bits (546), Expect = 7.090e-67
Identity = 114/154 (74.03%), Postives = 118/154 (76.62%), Query Frame = 0
Query:    1 MKIAYIILTALTIGMLKYRPSLKASYDASLDRFRLWMHGIVPSFVLAVIVQIWENLLGKRYSLPGVIRFAWNFSQVLEPLAVVPQLLVFRGSTDAGRLGWTYVTLMGAYRALYILNWVYRSYNEYGYRHHPLVYAAGIVQTGMYLMFLVDRRVR 154
            MKIA+I LT LTIGMLK RPSLKASYDASL                              Y LPGV+RFAWNFS+VLEPLAVVPQLLVFRGSTDAGRLGWTYVTLMGAYRALYILNWVY SYN+Y YRHHPLVYAAGIVQTGMYLMFLVDRRVR
Sbjct:   64 MKIAHIFLTGLTIGMLKSRPSLKASYDASL-----------------------------HYYLPGVLRFAWNFSEVLEPLAVVPQLLVFRGSTDAGRLGWTYVTLMGAYRALYILNWVYLSYNDYAYRHHPLVYAAGIVQTGMYLMFLVDRRVR 188          
BLAST of mRNA_Ecto-sp13_S_contig12483.2062.1 vs. uniprot
Match: D8LJM2_ECTSI (PGPS/D6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJM2_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 3.520e-33
Identity = 68/149 (45.64%), Postives = 93/149 (62.42%), Query Frame = 0
Query:    1 MKIAYIILTALTIGMLKYRPSLKASYDASLDRFRLWMHGIVPSFVLAVIVQIWENLLGKRYSLP--GVIRFAWNFSQVLEPLAVVPQLLVFRGSTDAGRLGWTYVTLMGAYRALYILNWVYRSYNEYGYRHHPLVYAAGIVQTGMYLMF 147
            MK+ YI LT+L I M++    +KA+YD S D F  W   + P   L +++  W        S+P   +I F W FS+VLEP A+VPQL+V +   +   L   YV L+GAYR+LYI+NWVYR++ E GY+HH LVY AG+VQT +Y  F
Sbjct:   63 MKVLYITLTSLIIYMIREHIPIKATYDKSQDSFLHWQFAVAPCAALGLLIHSWS---WWTVSMPFSSLINFFWTFSEVLEPFAIVPQLMVLQRYREVENLTGHYVFLLGAYRSLYIVNWVYRAHYEAGYQHHVLVYIAGLVQTLLYADF 208          
BLAST of mRNA_Ecto-sp13_S_contig12483.2062.1 vs. uniprot
Match: A0A835Z6E1_9STRA (ER lumen protein retaining receptor-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6E1_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.510e-29
Identity = 63/147 (42.86%), Postives = 89/147 (60.54%), Query Frame = 0
Query:    1 MKIAYIILTALTIGMLKYRPSLKASYDASLDRFRLWMHGIVPSFVLAVIVQIWENLLGKRYSLPGVIRFAWNFSQVLEPLAVVPQLLVFRGSTDAGRLGWTYVTLMGAYRALYILNWVYRSYNEYGYRHHPLVYAAGIVQTGMYLMF 147
            MK+ YI LTAL I M++ +  ++ +YDAS D F    + + P   LA +  + +           V    WNFS  LE +A+VPQL+V +   +   L   Y+  +GAYRALYILNW+YRS++E GY+HH +VY AGIVQT +Y+ F
Sbjct:   63 MKVLYIALTALIIHMMRAQSPIRGTYDASQDTFLHVKYAVAPCAALAALTMLVQGF--------DVRDLFWNFSIYLEAIAIVPQLIVLQRYREVENLTGHYIFFLGAYRALYILNWIYRSFHERGYKHHYVVYFAGIVQTALYVDF 201          
BLAST of mRNA_Ecto-sp13_S_contig12483.2062.1 vs. uniprot
Match: B7G303_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G303_PHATC)

HSP 1 Score: 116 bits (290), Expect = 3.950e-28
Identity = 58/148 (39.19%), Postives = 92/148 (62.16%), Query Frame = 0
Query:    1 MKIAYIILTALTIGMLKYRPSLKASYDASLDRFRLWMHGIVPSFVLAVIVQIWENLLG-KRYSLPGVIRFAWNFSQVLEPLAVVPQLLVFRGSTDAGRLGWTYVTLMGAYRALYILNWVYRSYNEYGYRHHPLVYAAGIVQTGMYLMF 147
            MK+ YI+ TA  +  ++++  +K++Y+ S D F  W   + P F +A+I     +L+G KR+ +   +   W FS  LE +A++PQL+V +   +   L   Y+  MGAYRALYI+NW+YR++ E GY+HH +VY  G+VQT +Y  F
Sbjct:   65 MKVLYIVSTASIVYTIRFKEPIKSTYEKSQDTFLHWKFAVAPCFAIALIT----HLIGSKRFDM---VELLWTFSIYLESIAILPQLIVLQRYREVENLTGNYIFFMGAYRALYIVNWIYRAHTEKGYKHHWVVYFCGVVQTLLYADF 205          
BLAST of mRNA_Ecto-sp13_S_contig12483.2062.1 vs. uniprot
Match: B8C2C4_THAPS (ER lumen protein-retaining receptor n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2C4_THAPS)

HSP 1 Score: 115 bits (287), Expect = 1.090e-27
Identity = 59/147 (40.14%), Postives = 86/147 (58.50%), Query Frame = 0
Query:    1 MKIAYIILTALTIGMLKYRPSLKASYDASLDRFRLWMHGIVPSFVLAVIVQIWENLLGKRYSLPGVIRFAWNFSQVLEPLAVVPQLLVFRGSTDAGRLGWTYVTLMGAYRALYILNWVYRSYNEYGYRHHPLVYAAGIVQTGMYLMF 147
            MK+ YI  TA  +  ++ +  + ++YD + D FR W   + P  VLA +  +     G  +S+  V    W FS  LE +A++PQL+V +   D   L   Y+  MG YRALYI+NWV+R+YNE GYRHH +VY  G++QT +Y  F
Sbjct:   63 MKVLYIASTASIVYTIRLQEPICSTYDKAQDTFRHWEFAVAPCAVLATLTHLISG--GGLFSVVDVQELLWTFSIYLEAVAILPQLIVLQRYRDVENLTGNYIFFMGLYRALYIVNWVFRAYNEPGYRHHYVVYFCGVLQTLLYADF 207          
BLAST of mRNA_Ecto-sp13_S_contig12483.2062.1 vs. uniprot
Match: A0A6H5KTW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTW6_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 3.370e-27
Identity = 64/87 (73.56%), Postives = 71/87 (81.61%), Query Frame = 0
Query:  170 MEPTSSARERLLPDQDT-------RERGLDGEVRGRKLSGAADAASVTSRRGRHQQSEETVSKIESVLSRERGQGQPSLHAMNAAED 249
            MEP+SSARERLLPDQDT       RERGLDGEV GRKLSGAA++ASVTSRRG++QQ +ETV KIESVL+RERGQ Q  LHA  A ED
Sbjct:    1 MEPSSSARERLLPDQDTDTEPSRNRERGLDGEVHGRKLSGAANSASVTSRRGQNQQGDETVRKIESVLNRERGQEQQPLHARKATED 87          
BLAST of mRNA_Ecto-sp13_S_contig12483.2062.1 vs. uniprot
Match: A0A1Z5KJM8_FISSO (ER lumen protein retaining receptor n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJM8_FISSO)

HSP 1 Score: 112 bits (281), Expect = 8.600e-27
Identity = 60/147 (40.82%), Postives = 86/147 (58.50%), Query Frame = 0
Query:    1 MKIAYIILTALTIGMLKYRPSLKASYDASLDRFRLWMHGIVPSFVLAVIVQIWENLLGKRYSLPGVIRFAWNFSQVLEPLAVVPQLLVFRGSTDAGRLGWTYVTLMGAYRALYILNWVYRSYNEYGYRHHPLVYAAGIVQTGMYLMF 147
            MKI YI+ TA  I  +K++  +K++YD S D F  W   + P  VLA +     +L+G   S    I   W FS  LE +A++PQL+V +   +   L   Y+  MGAYR LYILNW+YR+  E  Y+HH +VY  G++QT +Y+ F
Sbjct:   65 MKILYIVSTASIIYTIKFQEPIKSTYDKSQDSFLYWQFAVAPCAVLASVT----HLIGSGISGFSFIELLWTFSIYLESIAILPQLIVLQRYREVENLTGNYIFFMGAYRFLYILNWIYRANFEAHYQHHWVVYICGVLQTLLYVDF 207          
BLAST of mRNA_Ecto-sp13_S_contig12483.2062.1 vs. uniprot
Match: A0A6U0IKH2_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0IKH2_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.140e-26
Identity = 56/143 (39.16%), Postives = 84/143 (58.74%), Query Frame = 0
Query:    5 YIILTALTIGMLKYRPSLKASYDASLDRFRLWMHGIVPSFVLAVIVQIWENLLGKRYSLPGVIRFAWNFSQVLEPLAVVPQLLVFRGSTDAGRLGWTYVTLMGAYRALYILNWVYRSYNEYGYRHHPLVYAAGIVQTGMYLMF 147
            YI  TA  I M+++   + ++YD + D F  W   + P  V+A I     +L+G  +S   ++   W FS  LE +A++PQL+V +   +   L   Y+  MGAYRA YILNW+YRSY+E  Y+HH +VY  G++QT +Y  F
Sbjct:    1 YIATTAAIIYMIRFSEPICSTYDKAQDTFLHWKFAVAPCAVIAFIT----HLVGSGFSRFDLLELLWTFSIYLESIAILPQLIVLQRYREVENLTGNYIVFMGAYRAFYILNWIYRSYHEPMYQHHFVVYFCGVLQTVLYADF 139          
BLAST of mRNA_Ecto-sp13_S_contig12483.2062.1 vs. uniprot
Match: K0R4W5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R4W5_THAOC)

HSP 1 Score: 112 bits (280), Expect = 1.300e-26
Identity = 60/148 (40.54%), Postives = 85/148 (57.43%), Query Frame = 0
Query:    1 MKIAYIILTALTIGMLKYRPSLKASYDASLDRFRLWMHGIVPSFVLAVIVQIWENLLGKRYSL-PGVIRFAWNFSQVLEPLAVVPQLLVFRGSTDAGRLGWTYVTLMGAYRALYILNWVYRSYNEYGYRHHPLVYAAGIVQTGMYLMF 147
            MKIAYI+ TA  + M++    +  +YD + D FR W   + P  VLA +        G  YSL   +    W FS  LE +A++PQL++ +   +   L   Y+  MG+YRALYILNW+YR+Y E GYRHH + Y  G++QT +Y  F
Sbjct:   65 MKIAYILSTASIVYMIRLSDPICTTYDKAQDTFRHWAFAVGPCAVLATLTHFISGE-GSGYSLFVNIQELLWTFSIYLESIAILPQLILLQRYREVENLTGNYIFFMGSYRALYILNWIYRTYYEPGYRHHYVAYFCGVLQTLLYADF 211          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12483.2062.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6T5_ECTSI1.650e-11171.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRR1_ECTSI7.090e-6774.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LJM2_ECTSI3.520e-3345.64PGPS/D6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJM2... [more]
A0A835Z6E1_9STRA1.510e-2942.86ER lumen protein retaining receptor-domain-contain... [more]
B7G303_PHATC3.950e-2839.19Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
B8C2C4_THAPS1.090e-2740.14ER lumen protein-retaining receptor n=1 Tax=Thalas... [more]
A0A6H5KTW6_9PHAE3.370e-2773.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1Z5KJM8_FISSO8.600e-2740.82ER lumen protein retaining receptor n=2 Tax=Fistul... [more]
A0A6U0IKH2_9STRA1.140e-2639.16Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
K0R4W5_THAOC1.300e-2640.54Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000133ER lumen protein retaining receptorPRINTSPR00660ERLUMENRcoord: 137..152
score: 36.61
coord: 107..125
score: 60.15
coord: 71..91
score: 43.2
IPR000133ER lumen protein retaining receptorPFAMPF00810ER_lumen_receptcoord: 1..120
e-value: 7.1E-23
score: 82.1
IPR000133ER lumen protein retaining receptorPANTHERPTHR10585ER LUMEN PROTEIN RETAINING RECEPTORcoord: 1..148
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 150..250
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..53
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..34
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 54..98
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 120..130
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 131..149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..119
NoneNo IPR availableTMHMMTMhelixcoord: 97..119
NoneNo IPR availableTMHMMTMhelixcoord: 35..53
NoneNo IPR availableTMHMMTMhelixcoord: 132..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12483contigEcto-sp13_S_contig12483:124..2637 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12483.2062.1mRNA_Ecto-sp13_S_contig12483.2062.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12483 115..2637 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12483.2062.1 ID=prot_Ecto-sp13_S_contig12483.2062.1|Name=mRNA_Ecto-sp13_S_contig12483.2062.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=250bp
MKIAYIILTALTIGMLKYRPSLKASYDASLDRFRLWMHGIVPSFVLAVIV
QIWENLLGKRYSLPGVIRFAWNFSQVLEPLAVVPQLLVFRGSTDAGRLGW
TYVTLMGAYRALYILNWVYRSYNEYGYRHHPLVYAAGIVQTGMYLMFLVD
RRVRSSPHLPPDAAGDVDIMEPTSSARERLLPDQDTRERGLDGEVRGRKL
SGAADAASVTSRRGRHQQSEETVSKIESVLSRERGQGQPSLHAMNAAEDT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000133ER_ret_rcpt