prot_Ecto-sp13_S_contig12476.2053.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig12476.2053.1
Unique Name	prot_Ecto-sp13_S_contig12476.2053.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	282

Homology

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BLAST of mRNA_Ecto-sp13_S_contig12476.2053.1 vs. uniprot
Match: D7FHS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS4_ECTSI)

HSP 1 Score: 270 bits (691), Expect = 2.150e-87
Identity = 211/259 (81.47%), Postives = 213/259 (82.24%), Query Frame = 0

Query:   23 ENMAMLPDDSTLTVAIKDATVSTSTVNPARITSAVQKMRPDWCVNKRRVKRLLRSMNNDAWKAAVNTTVNAGNPSARGSSTTATASEPPSAEAPAASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGVVAPRGGGEEPLSESLDLATDLELEPGVDLKADLGIVTNAPAAAXXXXXXXXXXXXXXXXXXXASAVADSGRAEAADNLGFEMIDKAEVVGSGXXXXXXXXXXXXXXXXXTRSS 281
            ENMAMLPDDSTLT+AIKDATVSTSTVNPARITSAVQKMRPDWCVNKRRVKRLLRSMNNDAWKAAVNTTVNAGNPSARGSSTTA  +EPPSAEAP ASV                  XXXXXXXX                   GGV A  GGGEEPLSESLDLATDLELEPGVDLKADLGIVTNAPAAAXXXXXXXXXXXXXXXXXXX SAV DSGRAEAADNLGFEMIDKAEVVGSG XXXXXXXXXXXXXXXXTRSS
Sbjct:   29 ENMAMLPDDSTLTIAIKDATVSTSTVNPARITSAVQKMRPDWCVNKRRVKRLLRSMNNDAWKAAVNTTVNAGNPSARGSSTTANDNEPPSAEAPGASVTAAAETATTRSSIRAAAKXXXXXXXXEK-----------------GGVFARGGGGEEPLSESLDLATDLELEPGVDLKADLGIVTNAPAAAXXXXXXXXXXXXXXXXXXXXSAVGDSGRAEAADNLGFEMIDKAEVVGSGAXXXXXXXXXXXXXXXXTRSS 270

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BLAST of mRNA_Ecto-sp13_S_contig12476.2053.1 vs. uniprot
Match: A0A6H5K3S6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3S6_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 3.250e-43
Identity = 174/317 (54.89%), Postives = 176/317 (55.52%), Query Frame = 0

Query:   60 MRPDWCVNKRRVKRLLRSMNNDAWKAAVNTTVNAGNPSARGSSTT--ATASEPPSAEAP-----------------------------------------------------------------------------------------AASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA----GGVVAPRGGGEEPLSESLDLATDLELEPGVDLKADLGIVTNAPAAAXXXXXXXXXXXXXXXXXXXASAVADSGRAEAADNLGFEMIDKAEVVGSGXXXXXXXXXXXXXXXXXTRSS 281
            MRPDWCVNKRRVKRLLRSMNNDAWKAAVNTTVNAGNPS RGSSTT  ATASEPPSAEA                                                                                          A +V  XXXXXXXXX                        XXXXXXXX A    GGVVAP  GGEEPLSESLDLATDLELEPGVDLKADLGIVTNAPAA XXXXXXXXXXXXXXXXXX  SAV+DSGRAEAADNLGFEMIDKAEVVGSG           XXXXXXTRSS
Sbjct:    1 MRPDWCVNKRRVKRLLRSMNNDAWKAAVNTTVNAGNPSGRGSSTTTIATASEPPSAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXGVCETAPASPGSPAGPTTAATAAATAVGSXXXXXXXXXAPLLSPAETVGSCQPGANCSATAGXXXXXXXXGAPWEDGGVVAPVEGGEEPLSESLDLATDLELEPGVDLKADLGIVTNAPAAXXXXXXXXXXXXXXXXXXX--SAVSDSGRAEAADNLGFEMIDKAEVVGSGAGTGVNGKTRKXXXXXXTRSS 315

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig12476.2053.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig12476.2053.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FHS4_ECTSI	2.150e-87	81.47	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K3S6_9PHAE	3.250e-43	54.89	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 143..163

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig12476	contig	Ecto-sp13_S_contig12476:330..3282 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig12476.2053.1	mRNA_Ecto-sp13_S_contig12476.2053.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig12476 330..3282 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig12476.2053.1 ID=prot_Ecto-sp13_S_contig12476.2053.1|Name=mRNA_Ecto-sp13_S_contig12476.2053.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=282bp
DSGTHPRSKSTQRLPISSSRTLENMAMLPDDSTLTVAIKDATVSTSTVNP
ARITSAVQKMRPDWCVNKRRVKRLLRSMNNDAWKAAVNTTVNAGNPSARG
SSTTATASEPPSAEAPAASVATAAETATTRSSIRAAAKAAKAAKAAEKAL
KLADKAAAKAADKAAGGVVAPRGGGEEPLSESLDLATDLELEPGVDLKAD
LGIVTNAPAAAAAAATAVTEVEDGGCGGAGASAVADSGRAEAADNLGFEM
IDKAEVVGSGAGTGANSKARKPWPWAWTRSS*