prot_Ecto-sp13_S_contig1243.2019.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1243.2019.1
Unique Nameprot_Ecto-sp13_S_contig1243.2019.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length131
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1243.2019.1 vs. uniprot
Match: D8LHH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH6_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 6.520e-43
Identity = 124/135 (91.85%), Postives = 127/135 (94.07%), Query Frame = 0 
Query:    1 LSGIDAFSAARSAAPGRDSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----TEAVLPAGDGLDTSSATTGGAGGEGESAKSRPFSPRSDFMASRVRLCSAGSDVTIGTDTSRNLHDSGSTSTTAVLSNFAEV 131
            + GIDAFSAARSAAPGRDSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    TEAVLPAG+GLDTSSATTGG  GEGESAKSRPFSPRSDFMASRVRLCSAGSDVTIGTD SRNLHDSGSTSTTAVL+NFAEV
Sbjct: 1484 IEGIDAFSAARSAAPGRDSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTEAVLPAGEGLDTSSATTGGXXGEGESAKSRPFSPRSDFMASRVRLCSAGSDVTIGTDASRNLHDSGSTSTTAVLTNFAEV 1618
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1243.2019.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHH6_ECTSI6.520e-4391.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1243contigEcto-sp13_S_contig1243:809..1476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1243.2019.1mRNA_Ecto-sp13_S_contig1243.2019.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1243 809..1476 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1243.2019.1 ID=prot_Ecto-sp13_S_contig1243.2019.1|Name=mRNA_Ecto-sp13_S_contig1243.2019.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=131bp
LSGIDAFSAARSAAPGRDSTESSASAAAAAAAAAATAAASTASTASLAAL
TEAVLPAGDGLDTSSATTGGAGGEGESAKSRPFSPRSDFMASRVRLCSAG
SDVTIGTDTSRNLHDSGSTSTTAVLSNFAEV
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