prot_Ecto-sp13_S_contig1240.1993.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1240.1993.1
Unique Nameprot_Ecto-sp13_S_contig1240.1993.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length340
Homology
BLAST of mRNA_Ecto-sp13_S_contig1240.1993.1 vs. uniprot
Match: D7FGU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGU4_ECTSI)

HSP 1 Score: 547 bits (1410), Expect = 1.170e-194
Identity = 296/325 (91.08%), Postives = 306/325 (94.15%), Query Frame = 0
Query:   16 MIPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPHAVETTSQLVEVRLNDVGAAGGGGLTFHGGRRSEEELRLIYSAVVVRAVNGLTGHEQKAAYATPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRLAADFLMDYLWRRHWSPQAEHLGFVWGAFDQFICRYKATSDSDALLPRSPPPGHAGRSXXXXXXXXXXXXXXXXXXNISYGDSSSKPPGTPRGAGSSAASKPGTAAMKLAAHEIVLSATPTALSWAVVALLADGGGRVSGGDFVGGVGGTKGRGQGHLLPRSRDKYPTPGTPGVDSRQVSRRLTER 340
            MIPWRDWDEWYRVKALLFSP+PYLR+QGVQHVAVWQSRERIPHAVETTSQLVEVRLNDVGAA GGGL FHGG+RSEEELRLIYSAVVVRAVNGLTGHEQKAA+A PVSSLAREIGLPTWIVDIRHEAAHKQLPGIV+LRLAADFL+DYLWRRHWSPQAEHLGFVWGAFDQ I RYKATSDS+AL+PRS  PGHAGRS XXXXXXXXXXXXXXXXX    GDSSSKPPGTPRG GSSAASKPG AAM++AAHEI LSATPTALSWAVVALLADGGGRV GGD VGGV GTKGRGQGHLLPRSRDKYPTPGTPGVDSRQVSRRLT R
Sbjct:    1 MIPWRDWDEWYRVKALLFSPDPYLRTQGVQHVAVWQSRERIPHAVETTSQLVEVRLNDVGAAKGGGLAFHGGQRSEEELRLIYSAVVVRAVNGLTGHEQKAAHAAPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVSLRLAADFLVDYLWRRHWSPQAEHLGFVWGAFDQLIGRYKATSDSEALMPRSSSPGHAGRSSXXXXXXXXXXXXXXXXXXXXDGDSSSKPPGTPRGTGSSAASKPGAAAMEVAAHEIALSATPTALSWAVVALLADGGGRVGGGDCVGGVSGTKGRGQGHLLPRSRDKYPTPGTPGVDSRQVSRRLTAR 325          
BLAST of mRNA_Ecto-sp13_S_contig1240.1993.1 vs. uniprot
Match: A0A6H5JW11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW11_9PHAE)

HSP 1 Score: 541 bits (1394), Expect = 2.880e-186
Identity = 287/323 (88.85%), Postives = 294/323 (91.02%), Query Frame = 0
Query:    1 MSRPINADAGLCIPRMIPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPHAVETTSQLVEVRLNDVGAAGGGGLTFHGGRRSEEELRLIYSAVVVRAVNGLTGHEQKAAYATPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRLAADFLMDYLWRRHWSPQAEHLGFVWGAFDQFICRYKATSDSDALLPRSPPPGHAGRSXXXXXXXXXXXXXXXXXXNISYGDSSSKPPGTPRGAGSSAASKPGTAAMKLAAHEIVLSATPTALSWAVVALLADGGGRVSGGDFVGGVGGTKGRGQGHLLPRSRDKYPTP 323
            MSRPINADAG  IPRMIPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPHAVETTSQLVEVRLND GAAG GGLTFHGG+RSEEELRLIYSAVVVRAVNGLTGHEQKAA+A PVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRLAADFL+DYLWRRHWSPQAEHLGFVWGAFDQ ICRYKATSDSDAL+PRS  PGHAGR        XXXXXXXXXXX     D  SKPPGTPRG GSSAASK G AAM++AAHEIVLSATPTALSWAVV+LLADGGGRV G  FVGGVGGTKGRGQGHLLPRSRDKYPTP
Sbjct:    1 MSRPINADAGQYIPRMIPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPHAVETTSQLVEVRLNDAGAAGRGGLTFHGGQRSEEELRLIYSAVVVRAVNGLTGHEQKAAHAAPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRLAADFLVDYLWRRHWSPQAEHLGFVWGAFDQLICRYKATSDSDALMPRSSSPGHAGRPSSKKPRTXXXXXXXXXXXXXXXXDXXSKPPGTPRGTGSSAASKFGAAAMEVAAHEIVLSATPTALSWAVVSLLADGGGRVRGEYFVGGVGGTKGRGQGHLLPRSRDKYPTP 323          
BLAST of mRNA_Ecto-sp13_S_contig1240.1993.1 vs. uniprot
Match: D8LD46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD46_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 3.940e-53
Identity = 120/150 (80.00%), Postives = 126/150 (84.00%), Query Frame = 0
Query:  191 KATSDSDALLPRSPPPGHAGRSXXXXXXXXXXXXXXXXXXNISYGDSSSKPPGTPRGAGSSAASKPGTAAMKLAAHEIVLSATPTALSWAVVALLADGGGRVSGGDFVGGVGGTKGRGQGHLLPRSRDKYPTPGTPGVDSRQVSRRLTER 340
            +AT DSDALLPRS  PGHAGRS      XXXXXXXXXXXX I+ G+  SKPP  PRG GSSAAS PGTAAM++AAHEI LSATPTALSWAVVALLADGGGRV GGDFVGGVGG   R QGHLLPRSRDKYPTPGTPGVDSRQVSRRL+ R
Sbjct:    6 EATRDSDALLPRSLSPGHAGRSSNKKTRXXXXXXXXXXXXKINDGNXXSKPPCAPRGRGSSAASNPGTAAMEVAAHEIALSATPTALSWAVVALLADGGGRVRGGDFVGGVGG---REQGHLLPRSRDKYPTPGTPGVDSRQVSRRLSAR 152          
BLAST of mRNA_Ecto-sp13_S_contig1240.1993.1 vs. uniprot
Match: A0A835YSI0_9STRA (Las1-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSI0_9STRA)

HSP 1 Score: 178 bits (451), Expect = 8.350e-52
Identity = 83/165 (50.30%), Postives = 121/165 (73.33%), Query Frame = 0
Query:   14 PRMIPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPHAVETTSQLVEVRLNDVGAAGGGGLTFHG--GRRSEEELRLIYSAVVVRAVNGLTGHEQKAAYATPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRLAADFLMDYLWRRHWSPQAEHL 176
            PR++PW++WDEW  V+ LL+SP+P  R++GV  VA W+ RER+PHAVE T+QLVEV L++   +     T+ G  GR S + LRL+YS+V+VR VNGL    QK A+A  +  +AR+IG+P+W+VD+RH+AAHK +P + + RLA+ FL+DYL +R+W  Q ++L
Sbjct:    8 PRLLPWQNWDEWVHVRGLLWSPDPVDRNEGVLRVAAWRCRERVPHAVECTAQLVEVALHEWRCS-----TYPGQYGRNSLQ-LRLMYSSVIVRTVNGLVEAHQKCAHAISIQQIARQIGIPSWLVDLRHDAAHKDMPSLASFRLASAFLLDYLSQRYWDVQQQNL 166          
BLAST of mRNA_Ecto-sp13_S_contig1240.1993.1 vs. uniprot
Match: A0A7S2RN98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RN98_9STRA)

HSP 1 Score: 155 bits (391), Expect = 4.660e-42
Identity = 78/185 (42.16%), Postives = 111/185 (60.00%), Query Frame = 0
Query:   14 PRMIPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPHAVETTSQLVEVRLNDVGAAGGGGLTFHGGRRSEEELRLIYSAVVVRAVNGLTGHEQKAAYATPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRLAADFLMDYLWRRHWSPQAEHLGFVWGAFDQFICRYKATSDSDA 198
            PR++PW+ WDEW+ V+  LFS +P L+   V  VA W+ R R+PHAVE+T+QLVEV L+D G  G           SE  L+  YS  VVRAVNG+   EQ+ A A+ VS +A  +GLPTW+VD+RH+A H  +P + TLR+AA  L+ + +  +W+ Q   L  +       + RY +  +  A
Sbjct:   19 PRVLPWQHWDEWFEVRDSLFSGDPLLQRAAVARVAAWRVRGRVPHAVESTAQLVEVMLDDQGRDG----------LSELVLQSCYSLSVVRAVNGVADAEQRGATASSVSLMASRVGLPTWLVDLRHDATHNAMPPLQTLRVAAQTLVHWFFEGYWTSQTRQLESLESLCVSVVQRYHSCQNRRA 193          
BLAST of mRNA_Ecto-sp13_S_contig1240.1993.1 vs. uniprot
Match: A0A7S3GZ26_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZ26_9STRA)

HSP 1 Score: 149 bits (375), Expect = 2.490e-38
Identity = 74/160 (46.25%), Postives = 107/160 (66.88%), Query Frame = 0
Query:   13 IPRMIPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPHAVETTSQLVEVRLNDVGAAGGGGLTFHGGRRSEEELRLIYSAVVVRAVNGLTGHEQKAAYATPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRLAADFLMDYLWRRHWSPQ 172
            IPR +P+ DWDEW  VK+ LFS EP   S  ++ V++W+ R R+P +V++T+QLVE+RL D  +     + +H    SE EL+L+YSA VVR+VNGL    Q+  YAT V +LA  +GLP WIV++RH+A H Q+P +  LR AA  L+++ +  +W PQ
Sbjct:   12 IPRFLPFADWDEWITVKSGLFSTEPRQISVALEMVSLWRVRGRLPLSVDSTAQLVELRLRDSPSENRAHV-YH----SENELKLLYSAAVVRSVNGLVDPSQQGVYATSVLTLAERMGLPGWIVELRHDATHNQMPSLSVLRTAASTLINWYFDFYWQPQ 166          
BLAST of mRNA_Ecto-sp13_S_contig1240.1993.1 vs. uniprot
Match: A0A7S0GXZ1_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GXZ1_MICPS)

HSP 1 Score: 141 bits (355), Expect = 3.090e-37
Identity = 69/163 (42.33%), Postives = 97/163 (59.51%), Query Frame = 0
Query:   15 RMIPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPHAVETTSQLVEVRLNDVGAAGGGGLTFHGGRR-SEEELRLIYSAVVVRAVNGLTGHEQKAAYATPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRLAADFLMDYLWRRHWSPQAEHL 176
            R +PWRDW EW RV+  L   +P  R   +  VA W+ R R+PHAV+ T+ L+E R  D G  G  G    GG   SE  LRL Y+A +VR VNG     QK  YA PV +LA+ +G+P  +VD+R  A+H+++P +  LR A++  + +L+ R+W  QA  L
Sbjct:    5 RRVPWRDWAEWDRVRVGLCGDDPQARDASIARVADWRRRGRVPHAVDCTASLLETRSLDAGVPGNVGNVGSGGAPLSENMLRLAYAAALVRMVNGAVDPSQKGKYAAPVMTLAKRMGIPAVLVDVRMAASHQEMPALALLRHASERALQWLFERYWHAQANQL 167          
BLAST of mRNA_Ecto-sp13_S_contig1240.1993.1 vs. uniprot
Match: T0R2P0_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R2P0_SAPDV)

HSP 1 Score: 145 bits (366), Expect = 5.370e-36
Identity = 74/162 (45.68%), Postives = 102/162 (62.96%), Query Frame = 0
Query:   19 WRDWDEWYRVKALLFSPEPYL------RSQGVQHVAVWQSRERIPHAVETTSQLVEVRLNDVGAAGGGGLTFHGGR--RSEEELRLIYSAVVVRAVNGLTGHEQKAAYATPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRLAADFLMDYLWRRHWSPQ 172
            W DW EW +V   LF+ E +L      + +G+  +A W++R  +P A+E T+QL E+  +D    G  GL   G    RS EELRL+Y+A ++R VNGL    QK AYA PVS+LA  IG+P W+VDIRHE+AH +LP + TL+LAA  L  +L+  +W PQ
Sbjct:   34 WMDWHEWQQVYRALFAVELHLDASNGDKLRGLARIAAWRARSDVPIAIEVTAQLAEISCHD----GAYGLATPGRSMYRSYEELRLLYAATILRCVNGLVDASQKGAYAMPVSTLAMRIGIPLWVVDIRHESAHTKLPALPTLQLAAQTLWKWLFEHYWQPQ 191          
BLAST of mRNA_Ecto-sp13_S_contig1240.1993.1 vs. uniprot
Match: A0A6A3SSJ5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SSJ5_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.570e-35
Identity = 72/166 (43.37%), Postives = 102/166 (61.45%), Query Frame = 0
Query:   16 MIPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPHAVETTSQLVEVRLND---------VGAAGGGGLTFHGGRRSEEELRLIYSAVVVRAVNGLTGHEQKAAYATPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRLAADFLMDYLWRRHWSPQ 172
            ++PW DW EW  V+A LFS +PY + + V  VA W+SR ++P A+  T+QLVE++L++         VG +           RS  EL L+Y++ +VR VNGL    QK AYAT VS+LA+ IG+P W+VD+RHE+ H QLP +  LR AA  L+ +L   +W  Q
Sbjct:    7 VVPWLDWAEWQEVRAGLFSCDPYAQQRVVSRVASWRSRVQLPVAINATAQLVELQLHESMAQHHHHAVGVSS----------RSHIELSLLYASTIVRCVNGLVDGSQKGAYATAVSTLAQRIGIPLWVVDLRHESTHNQLPSLPVLRFAAKHLLAWLRANYWEAQ 162          
BLAST of mRNA_Ecto-sp13_S_contig1240.1993.1 vs. uniprot
Match: W2QXV9_PHYPN (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2QXV9_PHYPN)

HSP 1 Score: 144 bits (363), Expect = 2.790e-35
Identity = 72/167 (43.11%), Postives = 102/167 (61.08%), Query Frame = 0
Query:   17 IPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPHAVETTSQLVEVRLND---------VGAAGGGGLTFHGGRRSEEELRLIYSAVVVRAVNGLTGHEQKAAYATPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRLAADFLMDYLWRRHWSPQAE 174
            +PW DW EW  V   LFS +P+ + + V  VA W+SR ++P A+  T+QLVE++L++         VG +           RS  EL L+Y++V+VR VNGL    QK AYAT VS+LA+ IG+P WIVD+RHE++H QLP +  LR AA  L+ +L   +W  Q +
Sbjct:    8 LPWLDWAEWQEVHVGLFSSDPFAQQRVVSRVASWRSRVQLPVAINATAQLVELQLHESMAQHHHHAVGVSS----------RSHMELSLLYASVIVRCVNGLVDGSQKGAYATAVSTLAQRIGIPLWIVDLRHESSHNQLPSLPVLRFAAQHLLAWLRSNYWGAQED 164          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1240.1993.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGU4_ECTSI1.170e-19491.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JW11_9PHAE2.880e-18688.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD46_ECTSI3.940e-5380.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YSI0_9STRA8.350e-5250.30Las1-like protein (Fragment) n=1 Tax=Tribonema min... [more]
A0A7S2RN98_9STRA4.660e-4242.16Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3GZ26_9STRA2.490e-3846.25Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S0GXZ1_MICPS3.090e-3742.33Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
T0R2P0_SAPDV5.370e-3645.68Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A6A3SSJ5_9STRA1.570e-3543.37Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
W2QXV9_PHYPN2.790e-3543.11Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007174Las1PFAMPF04031Las1coord: 17..170
e-value: 1.6E-42
score: 145.2
IPR007174Las1PANTHERPTHR15002UNCHARACTERIZEDcoord: 14..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1240contigEcto-sp13_S_contig1240:7816..14904 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1240.1993.1mRNA_Ecto-sp13_S_contig1240.1993.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1240 7816..14904 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1240.1993.1 ID=prot_Ecto-sp13_S_contig1240.1993.1|Name=mRNA_Ecto-sp13_S_contig1240.1993.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=340bp
MSRPINADAGLCIPRMIPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVW
QSRERIPHAVETTSQLVEVRLNDVGAAGGGGLTFHGGRRSEEELRLIYSA
VVVRAVNGLTGHEQKAAYATPVSSLAREIGLPTWIVDIRHEAAHKQLPGI
VTLRLAADFLMDYLWRRHWSPQAEHLGFVWGAFDQFICRYKATSDSDALL
PRSPPPGHAGRSSNKKTRTSSAAFGGGSSSNISYGDSSSKPPGTPRGAGS
SAASKPGTAAMKLAAHEIVLSATPTALSWAVVALLADGGGRVSGGDFVGG
VGGTKGRGQGHLLPRSRDKYPTPGTPGVDSRQVSRRLTER
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007174Las1