prot_Ecto-sp13_S_contig12322.1944.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12322.1944.1
Unique Nameprot_Ecto-sp13_S_contig12322.1944.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length243
Homology
BLAST of mRNA_Ecto-sp13_S_contig12322.1944.1 vs. uniprot
Match: D8LSP7_ECTSI (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSP7_ECTSI)

HSP 1 Score: 447 bits (1149), Expect = 2.030e-149
Identity = 229/240 (95.42%), Postives = 233/240 (97.08%), Query Frame = 0
Query:    1 QIRAGVLDCTAHPAQCEGSAKQKAPFLKVYPHGKGVDGDKRGFPSVLPATKLKEAVAEAGASLPEVVTVIPAGVGTQRIQDVVQSFLGANIFSGESPMCLFVLSKKEEPTAVVKTVAAAFQSAKVRVMFIAKPDQDLLAALGVYKLPAMMLMFSQQEGMNVAALNPDQPQPGEGEQAMVTAHYSPAHWGPVTHDHVSEFIMSHLSSLDTSAFLQHAREMSATARLNRERLPVQLERFLNE 240
            +IRAGVLDCTAHPAQCEGSAKQK PFLKVYPHGKGVDGDKRGFPSVLPAT +KEAVAEA ASLPEVVTVIPAGVGTQRIQDVVQSFLGANIFSGESPMCLFVLSKKEEPTAV+KTVAAAFQSAKVRVMFIAKPDQDLLAALGVYKLPAMMLMF QQEGMNVAALNPDQPQP EGEQAMVTAHYSPA WGPVTHDHVSEFIMSHLSSLDTSAFL HAREMSATA+LNRERLPVQLERFLNE
Sbjct:  379 EIRAGVLDCTAHPAQCEGSAKQKMPFLKVYPHGKGVDGDKRGFPSVLPATGVKEAVAEAEASLPEVVTVIPAGVGTQRIQDVVQSFLGANIFSGESPMCLFVLSKKEEPTAVIKTVAAAFQSAKVRVMFIAKPDQDLLAALGVYKLPAMMLMFPQQEGMNVAALNPDQPQPREGEQAMVTAHYSPAQWGPVTHDHVSEFIMSHLSSLDTSAFLLHAREMSATAKLNRERLPVQLERFLNE 618          
BLAST of mRNA_Ecto-sp13_S_contig12322.1944.1 vs. uniprot
Match: A0A7S2GE96_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GE96_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 3.840e-8
Identity = 59/202 (29.21%), Postives = 95/202 (47.03%), Query Frame = 0
Query:    2 IRAGVLDCTAHPAQCEGSAKQKAPFLKVYPHGKGVDGDKRGFPSVLPATKLKEAVAEAGASLPEVVTVIPAGVGTQRIQDVV--QSFLGANIFSGESPMCLFVLSKKEEPTAVVKTVAAAFQSAKVRVMFIAKPDQDLLAALGVYKLPAMMLMFSQQEGMNVAALNPDQPQPGEGEQAMVTAHYSPAHWGPVTHDHVSEFIM 201
            I A  ++C+A P  C G      P +KV+ +G     D    P   PA++  +A+  AG S+P++         T +I D+    + +GA   S +S + L ++S K+EP  ++K++A A     V   F   PD   L  L + +LP  + MFSQ  G + +  NP++ Q G          + P  +G  T   VS FI+
Sbjct:   33 IGAAQVNCSASPKLCSGGGA--LPHVKVFDYGIEEKEDILAAPEQFPASESAQALESAGESIPDL---------TLKINDMSLDNAIIGA---SQDSKILLVLMSNKDEPPVMLKSLAMALPVG-VAFAFFQSPDPQTLERLQINRLPMFITMFSQ--GASDSG-NPNEMQLG-------VRAFDPREFGKPTFSAVSNFIV 209          
BLAST of mRNA_Ecto-sp13_S_contig12322.1944.1 vs. uniprot
Match: A0A7S2GFB5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GFB5_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 4.650e-8
Identity = 59/202 (29.21%), Postives = 95/202 (47.03%), Query Frame = 0
Query:    2 IRAGVLDCTAHPAQCEGSAKQKAPFLKVYPHGKGVDGDKRGFPSVLPATKLKEAVAEAGASLPEVVTVIPAGVGTQRIQDVV--QSFLGANIFSGESPMCLFVLSKKEEPTAVVKTVAAAFQSAKVRVMFIAKPDQDLLAALGVYKLPAMMLMFSQQEGMNVAALNPDQPQPGEGEQAMVTAHYSPAHWGPVTHDHVSEFIM 201
            I A  ++C+A P  C G      P +KV+ +G     D    P   PA++  +A+  AG S+P++         T +I D+    + +GA   S +S + L ++S K+EP  ++K++A A     V   F   PD   L  L + +LP  + MFSQ  G + +  NP++ Q G          + P  +G  T   VS FI+
Sbjct:  353 IGAAQVNCSASPKLCSGGGA--LPHVKVFDYGIEEKEDILAAPEQFPASESAQALESAGESIPDL---------TLKINDMSLDNAIIGA---SQDSKILLVLMSNKDEPPVMLKSLAMALPVG-VAFAFFQSPDPQTLERLQINRLPMFITMFSQ--GASDSG-NPNEMQLG-------VRAFDPREFGKPTFSAVSNFIV 529          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12322.1944.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LSP7_ECTSI2.030e-14995.42Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A7S2GE96_9STRA3.840e-829.21Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2GFB5_9STRA4.650e-829.21Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12322contigEcto-sp13_S_contig12322:1845..4787 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12322.1944.1mRNA_Ecto-sp13_S_contig12322.1944.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12322 1845..4787 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12322.1944.1 ID=prot_Ecto-sp13_S_contig12322.1944.1|Name=mRNA_Ecto-sp13_S_contig12322.1944.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=243bp
QIRAGVLDCTAHPAQCEGSAKQKAPFLKVYPHGKGVDGDKRGFPSVLPAT
KLKEAVAEAGASLPEVVTVIPAGVGTQRIQDVVQSFLGANIFSGESPMCL
FVLSKKEEPTAVVKTVAAAFQSAKVRVMFIAKPDQDLLAALGVYKLPAMM
LMFSQQEGMNVAALNPDQPQPGEGEQAMVTAHYSPAHWGPVTHDHVSEFI
MSHLSSLDTSAFLQHAREMSATARLNRERLPVQLERFLNEVQ*
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