prot_Ecto-sp13_S_contig12165.1827.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12165.1827.1
Unique Nameprot_Ecto-sp13_S_contig12165.1827.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length311
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12165.1827.1 vs. uniprot
Match: D8LKQ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ1_ECTSI)

HSP 1 Score: 405 bits (1040), Expect = 8.180e-137
Identity = 256/314 (81.53%), Postives = 262/314 (83.44%), Query Frame = 0 
Query:    1 GESDELLGWEAIALGRIGIKYVRSRDDLGWYLASLHTLKKSQWPTVIAVDDVDKIIETSASXXXXXXXXXXXXXXXXXXXXXLLQDTAEFFDKSXXXXXXXXXXXXRGSTAGGTPNRTXXXXXXXXXXXXXQAADRGSGSGGNTSSPKPQPSGNLRVVGGEGESFAWTPGEGSRAAEGARPKGGGRDDVTGEAAAVRVVSTCSTSDRGMLSLYGRFVHVVARVQNTTGPDCFSLRVDPGIGTASAPYLYPRPRPSAASPPHGSGGFTPGFTPWDGGCGDGDGGRDAAAAAA----HQEVVEYVRSQIDGSFALF 310
            GESDEL GWEAIALGRIGIKYVRSRDDL WYLASLHTLKKSQWPTVIAVDDVDKIIETSA XXXXXXXXXXXXXXX      LLQDTAEFFDKS         XX RGSTAG TPNR XXXXXXXXXXXXXQ A+RGSG GGNTSSP+ QPSGNLRVVGGEGE FAWTPGEGSRAA+GARPKGGGRDD+TGEAAAVRVV+TCSTSDRGMLSLYGRFVHVVARVQNTTGPDCFSLRVDPGIGTASAP  Y RPRP+AAS   GSGGF PGFTPWDG                    HQEVVEYVRSQIDGSFALF
Sbjct:  171 GESDELRGWEAIALGRIGIKYVRSRDDLAWYLASLHTLKKSQWPTVIAVDDVDKIIETSAGXXXXXXXXXXXXXXXLRILA-LLQDTAEFFDKSRAEAAATAAXXARGSTAGSTPNRXXXXXXXXXXXXXXQPAERGSGGGGNTSSPQSQPSGNLRVVGGEGERFAWTPGEGSRAADGARPKGGGRDDITGEAAAVRVVTTCSTSDRGMLSLYGRFVHVVARVQNTTGPDCFSLRVDPGIGTASAPAPYLRPRPAAAS---GSGGFAPGFTPWDGXXXXXXXXXXXXXXXXXXXXHQEVVEYVRSQIDGSFALF 480
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BLAST of mRNA_Ecto-sp13_S_contig12165.1827.1 vs. uniprot
Match: A0A6H5LPQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LPQ2_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 8.620e-53
Identity = 138/165 (83.64%), Postives = 143/165 (86.67%), Query Frame = 0 
Query:   52 VDKIIETSASXXXXXXXXXXXXXXXXXXXXX-LLQDTAEFFDKSXXXXXXXXXXXXRGSTAGGTPNRTXXXXXXXXXXXXXQAADRGSGSGGNTSSPKPQPSGNLRVVGGEGESFAWTPGEGSRAAEGARPKGGGRDDVTGEAAAVRVVSTCSTSDRGMLSLYGR 215
            +DKIIETS S   XXXXXXXXXXXXX      LLQDTAEFFDKS    XXXXXXX RGSTA GTPNRT XXXXXXXXXXXX  ADRGSGSGGNTSSP+ QPSG+LR+VGGEGE FAWTPGEGSRAAEGARPKGGG DDVTGEAAAVRVVSTCSTSDRGML+LYGR
Sbjct:    1 MDKIIETSGSGDGXXXXXXXXXXXXXALRILALLQDTAEFFDKSRAEAXXXXXXXARGSTAEGTPNRTTXXXXXXXXXXXXXPADRGSGSGGNTSSPQSQPSGSLRIVGGEGERFAWTPGEGSRAAEGARPKGGGCDDVTGEAAAVRVVSTCSTSDRGMLALYGR 165
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12165.1827.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKQ1_ECTSI8.180e-13781.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LPQ2_9PHAE8.620e-5383.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12165contigEcto-sp13_S_contig12165:42..1768 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12165.1827.1mRNA_Ecto-sp13_S_contig12165.1827.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12165 42..1768 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12165.1827.1 ID=prot_Ecto-sp13_S_contig12165.1827.1|Name=mRNA_Ecto-sp13_S_contig12165.1827.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=311bp
GESDELLGWEAIALGRIGIKYVRSRDDLGWYLASLHTLKKSQWPTVIAVD
DVDKIIETSASGGGGGGGGGGGGGGAALRILALLQDTAEFFDKSRAEAAA
AAAAAARGSTAGGTPNRTTGGTPNKTTAATPQAADRGSGSGGNTSSPKPQ
PSGNLRVVGGEGESFAWTPGEGSRAAEGARPKGGGRDDVTGEAAAVRVVS
TCSTSDRGMLSLYGRFVHVVARVQNTTGPDCFSLRVDPGIGTASAPYLYP
RPRPSAASPPHGSGGFTPGFTPWDGGCGDGDGGRDAAAAAAHQEVVEYVR
SQIDGSFALF*
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