prot_Ecto-sp13_S_contig12115.1798.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12115.1798.1
Unique Nameprot_Ecto-sp13_S_contig12115.1798.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length109
Homology
BLAST of mRNA_Ecto-sp13_S_contig12115.1798.1 vs. uniprot
Match: D7G613_ECTSI (PUB domain, zinc finger protein Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G613_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 7.850e-62
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0
Query:    1 MEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFVKEESRLFMSMEARDEGLLASAKEKLEDAIASYVPTKAS 108
            MEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGF KEESRLFMSMEARDEGLLA+AKEKLEDAIASYVPTKAS
Sbjct:  487 MEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKEESRLFMSMEARDEGLLANAKEKLEDAIASYVPTKAS 594          
BLAST of mRNA_Ecto-sp13_S_contig12115.1798.1 vs. uniprot
Match: A0A835Z023_9STRA (PUB domain, zinc finger protein thioredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z023_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.240e-27
Identity = 57/104 (54.81%), Postives = 77/104 (74.04%), Query Frame = 0
Query:    3 KAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFVKE----ESRLFMSMEARDEGLLASAKEKLEDAIASY 102
            KA+++L++Q VAG GGTAMKT   YI N L  P EEK+R+I+LDN AFK R+A C+GGV LL+A+GF K     E+RL MS +ARDE LL + K +++ A+A+Y
Sbjct:  479 KAIELLSQQRVAGEGGTAMKTINIYIGNVLAHPAEEKYRAISLDNKAFKARIAGCLGGVGLLRAIGFAKADDGGEARLVMSADARDEALLQAVKARIDAALATY 582          
BLAST of mRNA_Ecto-sp13_S_contig12115.1798.1 vs. uniprot
Match: A0A7S2V754_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V754_9STRA)

HSP 1 Score: 100 bits (248), Expect = 6.250e-23
Identity = 53/108 (49.07%), Postives = 69/108 (63.89%), Query Frame = 0
Query:    1 MEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFVKEESR----LFMSMEARDEGLLASAKEKLEDAIASYVP 104
            ++K + +++R    G GG A+KT LAY KN + KPEE KFR+IN++NNAFK RVA   GGVALLKAVGFV+E         +  E  D G L   + KLE A A++ P
Sbjct:  241 VDKCIGLISRHRTGGDGGVALKTLLAYTKNIVEKPEEAKFRTINMENNAFKKRVAGIAGGVALLKAVGFVQEVGEDGGNKLVLPEDCDRGFLLETRAKLEAAFAAFQP 348          
BLAST of mRNA_Ecto-sp13_S_contig12115.1798.1 vs. uniprot
Match: A0A4D9D704_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D704_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 4.780e-22
Identity = 52/104 (50.00%), Postives = 69/104 (66.35%), Query Frame = 0
Query:    1 MEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFVKE--ESRLFMSMEARDEGLLASAKEKLEDAIASY 102
            +EKA+ ++ RQ +A  GG A+KT +AY+KN      EEKFRSINL+N AFK+RVA  +GG +LLKA+GF K+  E R F++ E  D   L   K KLE A+  Y
Sbjct:  474 VEKAIGLMKRQRIADGGGMALKTLIAYVKNIAGTAGEEKFRSINLENKAFKSRVAPVLGGSSLLKAIGFTKDDVEGRWFLAPEHVDVAFLGEVKGKLEAALIEY 577          
BLAST of mRNA_Ecto-sp13_S_contig12115.1798.1 vs. uniprot
Match: F0WA39_9STRA (Uncharacterized protein AlNc14C43G3583 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WA39_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 4.820e-21
Identity = 52/99 (52.53%), Postives = 69/99 (69.70%), Query Frame = 0
Query:    5 VDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFVKEES--RLFMSMEARDEGLLASAKEKLEDAIAS 101
            +D L +  +AG G TA+KT   Y+KN + KP+EEKFRSINLDN AF+ RVA+ +GG+A LKA+G+ K+ES   L + +E RD  LL  AK   E AIA+
Sbjct:  388 IDKLKQYRMAGDGLTALKTLNMYLKNLIEKPDEEKFRSINLDNAAFRKRVASLVGGIAFLKALGYEKDESDNTLKLDIEKRDMELLKHAKTCTESAIAA 486          
BLAST of mRNA_Ecto-sp13_S_contig12115.1798.1 vs. uniprot
Match: A0A8J2S6A4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S6A4_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 6.890e-21
Identity = 51/106 (48.11%), Postives = 73/106 (68.87%), Query Frame = 0
Query:    1 MEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTK-PEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFVKEESRLFMSMEARD--EGLLASAKEKLEDAIASYV 103
            ++KA+  + +   AG GGT +KT  AY++NA+ K  ++EK+R I LDN AFK RV+  +GG+ALLKAVGFVK+E+ L +++  RD  + LL     KLE A A+YV
Sbjct:  278 VDKAIGTIQKYKTAGDGGTCLKTLGAYLRNAINKGDQDEKYRKIPLDNAAFKKRVSGLVGGIALLKAVGFVKDETHLELTLAVRDSNKALLEETLAKLEKAHAAYV 383          
BLAST of mRNA_Ecto-sp13_S_contig12115.1798.1 vs. uniprot
Match: A0A3R7HMX5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HMX5_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 2.460e-20
Identity = 51/98 (52.04%), Postives = 69/98 (70.41%), Query Frame = 0
Query:    5 VDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFVKEES--RLFMSMEARDEGLLASAKEKLEDAIA 100
            +  L +  V G G TA+KT   Y+KN L KPEEEKFR+INL+N AF+ RVA+ +GGVA LK++G+ K+ES   L +S+E RD  LL  A+ +L+ AIA
Sbjct:  401 ISKLKKYRVGGDGLTAVKTLNVYVKNLLEKPEEEKFRTINLENPAFRKRVASLVGGVAFLKSLGYEKDESDGNLKLSLEKRDVELLEYARIQLQGAIA 498          
BLAST of mRNA_Ecto-sp13_S_contig12115.1798.1 vs. uniprot
Match: A0A2D4BDJ2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDJ2_PYTIN)

HSP 1 Score: 93.6 bits (231), Expect = 4.550e-20
Identity = 50/98 (51.02%), Postives = 68/98 (69.39%), Query Frame = 0
Query:    5 VDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFVKEESR--LFMSMEARDEGLLASAKEKLEDAIA 100
            V+ L +  V G G TA+KT   Y+KN + KP+E+KFRSINL+N AF+ RVA+ +GGVA LKA+G+ K+E    L +++E RD  LL  A+  LE AIA
Sbjct:  396 VEKLKKYRVGGDGLTALKTLNVYVKNLIEKPDEDKFRSINLENAAFRKRVASLVGGVAFLKALGYEKDEQSGMLNLAVEKRDATLLQHARSTLERAIA 493          
BLAST of mRNA_Ecto-sp13_S_contig12115.1798.1 vs. uniprot
Match: A0A329T0H4_9STRA (Uncharacterized protein n=22 Tax=Phytophthora TaxID=4783 RepID=A0A329T0H4_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 6.340e-20
Identity = 50/100 (50.00%), Postives = 70/100 (70.00%), Query Frame = 0
Query:    3 KAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFVKEES--RLFMSMEARDEGLLASAKEKLEDAIA 100
            K V +L +  V   G TA+KT   Y+KN + KPEE+KFR+INLDN AF+ RVA+ +GGVA LK++G+ K+E+   L +S+E RD  LL  A+ +L+ AIA
Sbjct:  399 KNVGILKKYRVGNDGLTALKTLNVYVKNLIEKPEEDKFRTINLDNAAFRKRVASLVGGVAFLKSLGYAKDEADGNLKLSVENRDVELLQYARTQLQGAIA 498          
BLAST of mRNA_Ecto-sp13_S_contig12115.1798.1 vs. uniprot
Match: H3GS46_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GS46_PHYRM)

HSP 1 Score: 92.4 bits (228), Expect = 1.190e-19
Identity = 53/100 (53.00%), Postives = 68/100 (68.00%), Query Frame = 0
Query:    3 KAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFVKEES--RLFMSMEARDEGLLASAKEKLEDAIA 100
            K V +L +  V   G TA+KT   Y+KN L KPEEEKFR+INL+N AF+ RVA+  GGVA LKA+G+ K+ES   L +SME RD  LL   + +L+ AIA
Sbjct:  398 KNVGILKKYRVGNDGLTALKTLNVYVKNLLEKPEEEKFRTINLENPAFRKRVASLGGGVAFLKALGYEKDESDGNLKLSMEHRDVELLQYGRTQLQGAIA 497          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12115.1798.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G613_ECTSI7.850e-6298.15PUB domain, zinc finger protein Thioredoxin n=1 Ta... [more]
A0A835Z023_9STRA2.240e-2754.81PUB domain, zinc finger protein thioredoxin n=1 Ta... [more]
A0A7S2V754_9STRA6.250e-2349.07Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A4D9D704_9STRA4.780e-2250.00Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
F0WA39_9STRA4.820e-2152.53Uncharacterized protein AlNc14C43G3583 n=1 Tax=Alb... [more]
A0A8J2S6A4_9STRA6.890e-2148.11Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A3R7HMX5_9STRA2.460e-2052.04Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A2D4BDJ2_PYTIN4.550e-2051.02Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A329T0H4_9STRA6.340e-2050.00Uncharacterized protein n=22 Tax=Phytophthora TaxI... [more]
H3GS46_PHYRM1.190e-1953.00Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018997PUB domainSMARTSM00580PGNneucoord: 19..79
e-value: 1.4E-6
score: 37.9
IPR018997PUB domainPFAMPF09409PUBcoord: 19..90
e-value: 3.2E-18
score: 65.4
NoneNo IPR availableGENE3D1.20.58.2190coord: 17..98
e-value: 1.4E-18
score: 68.3
NoneNo IPR availablePANTHERPTHR46713FAMILY NOT NAMEDcoord: 18..100
IPR036339PUB-like domain superfamilySUPERFAMILY143503PUG domain-likecoord: 19..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12115contigEcto-sp13_S_contig12115:3205..4189 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12115.1798.1mRNA_Ecto-sp13_S_contig12115.1798.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12115 2589..5130 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12115.1798.1 ID=prot_Ecto-sp13_S_contig12115.1798.1|Name=mRNA_Ecto-sp13_S_contig12115.1798.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=109bp
MEKAVDMLARQTVAGLGGTAMKTCLAYIKNALTKPEEEKFRSINLDNNAF
KNRVATCIGGVALLKAVGFVKEESRLFMSMEARDEGLLASAKEKLEDAIA
SYVPTKAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018997PUB_domain
IPR036339PUB-like_dom_sf