prot_Ecto-sp13_S_contig12101.1791.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12101.1791.1
Unique Nameprot_Ecto-sp13_S_contig12101.1791.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length187
Homology
BLAST of mRNA_Ecto-sp13_S_contig12101.1791.1 vs. uniprot
Match: A0A6H5KV38_9PHAE (Exportin-T (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV38_9PHAE)

HSP 1 Score: 311 bits (797), Expect = 2.780e-102
Identity = 174/186 (93.55%), Postives = 175/186 (94.09%), Query Frame = 0
Query:    1 ATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESHHDRFLIREAVMGWLTQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAFEQLRSVLVVGSSXXXXXXXXXXXXXXXXXXXXXXARAHVELYLRVLCALDEEVVSFHVDRSREEADHNSLIKVRM 186
            ATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVES HDRFLIREAVMGWLTQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPE+WTDAFEQLRSVLVVGSS        XXXXXXXXXXXXXXARAHVELYLRVLCALDEEVVSFHVDRSREEADHNSLIK  M
Sbjct:   30 ATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESKHDRFLIREAVMGWLTQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPESWTDAFEQLRSVLVVGSSNCSGDAAVXXXXXXXXXXXXXXARAHVELYLRVLCALDEEVVSFHVDRSREEADHNSLIKDTM 215          
BLAST of mRNA_Ecto-sp13_S_contig12101.1791.1 vs. uniprot
Match: D7FNT8_ECTSI (Exportin-T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT8_ECTSI)

HSP 1 Score: 309 bits (791), Expect = 2.490e-95
Identity = 182/186 (97.85%), Postives = 182/186 (97.85%), Query Frame = 0
Query:    1 ATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESHHDRFLIREAVMGWLTQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAFEQLRSVLVVGSSXXXXXXXXXXXXXXXXXXXXXXARAHVELYLRVLCALDEEVVSFHVDRSREEADHNSLIKVRM 186
            ATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVES HDRFLIREAVMGWLTQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAFEQLRSVLVVGSSXXXXXXXXXXXXXXXXXXXXX ARAHVELYLRVLCALDEEVVSFHVDRSREEADHNSLIK  M
Sbjct:   30 ATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESQHDRFLIREAVMGWLTQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAFEQLRSVLVVGSSXXXXXXXXXXXXXXXXXXXXX-ARAHVELYLRVLCALDEEVVSFHVDRSREEADHNSLIKDTM 214          
BLAST of mRNA_Ecto-sp13_S_contig12101.1791.1 vs. uniprot
Match: A0A836CAL0_9STRA (Exportin-T n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAL0_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.060e-35
Identity = 82/186 (44.09%), Postives = 108/186 (58.06%), Query Frame = 0
Query:    1 ATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESHHDRFLIREAVMGWLTQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAFEQLRSVLVVGSSXXXXXXXXXXXXXXXXXXXXXXARAHVELYLRVLCALDEEVVSFHVDRSREEADHNSLIKVRM 186
            A+++C+EVK S +GW +AL+LF  T RPEARF+ L  LQDALGAR GA  R+     R  +RE ++GWLT  G      L   E +I TKV VVLALL+++D+PE W  AF QL ++L  G                          AHV L+LR L A+DE+VV F+  RS EE + N+L+K  M
Sbjct:   36 ASQFCDEVKASPEGWVVALQLFSTTTRPEARFYALMVLQDALGARPGAACRLTDPEHRQRVRECLLGWLTSPG----VALADVEKYIVTKVGVVLALLLRADFPERWPHAFTQLAALLPRGP-------------------------AHVGLFLRFLGAVDEDVVRFNAQRSPEEVERNTLVKDAM 192          
BLAST of mRNA_Ecto-sp13_S_contig12101.1791.1 vs. uniprot
Match: A0A662WTQ5_9STRA (Exportin-T (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WTQ5_9STRA)

HSP 1 Score: 100 bits (249), Expect = 2.640e-23
Identity = 63/187 (33.69%), Postives = 96/187 (51.34%), Query Frame = 0
Query:    1 ATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESHHDRFLIREAVMGWL-TQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAFEQLRSVLVVGSSXXXXXXXXXXXXXXXXXXXXXXARAHVELYLRVLCALDEEVVSFHVDRSREEADHNSLIKVRM 186
            A  +C  VK S DGWR  L+LF  +   + +F+ L  LQ+AL    G    V        IR  ++ WL T V     A ++++  +++TK+AVV+ LL+K DYP+ W+ AF +L ++L  G+S                          VE+Y R+L A++EE+V F   R+++EA HN  IK  M
Sbjct:   34 AESFCGSVKSSVDGWRYELQLFEHSQHEQVKFYALQALQEALTRGVGDDVAV-------AIRSELLNWLQTHV-----AYVESKAPYLKTKLAVVVTLLIKRDYPDRWSTAFTELLALLPQGASI-------------------------VEMYFRILLAINEEIVEFDAQRTQQEAAHNMRIKDAM 183          
BLAST of mRNA_Ecto-sp13_S_contig12101.1791.1 vs. uniprot
Match: A0A5D6XP74_9STRA (Exportin-T n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XP74_9STRA)

HSP 1 Score: 105 bits (262), Expect = 5.830e-23
Identity = 68/186 (36.56%), Postives = 96/186 (51.61%), Query Frame = 0
Query:    1 ATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESHHDRFLIREAVMGWLTQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAFEQLRSVLVVGSSXXXXXXXXXXXXXXXXXXXXXXARAHVELYLRVLCALDEEVVSFHVDRSREEADHNSLIKVRM 186
            A R+C  VK S DGWRLALELF  +   E +F+ L  LQ+AL A+  A   V +      +R A++ WL +      A ++ +  +++TK+AVV+ LL+K DYP  W  AF +L ++L  G+                         A VE+Y RVL A++EE+V F   RS  EA  N  IK  M
Sbjct:   35 AERFCASVKASADGWRLALELFEFSEHEEVKFYALQALQEAL-AKGVADDAVAAR-----VRAALLAWLRE----NAAFVERKAPYLKTKLAVVVTLLIKRDYPARWPSAFAELLALLPQGA-------------------------AMVEMYFRVLVAINEEIVEFDAQRSPAEAAANMRIKDAM 185          
BLAST of mRNA_Ecto-sp13_S_contig12101.1791.1 vs. uniprot
Match: A0A8K1FDJ6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDJ6_PYTOL)

HSP 1 Score: 99.8 bits (247), Expect = 5.920e-21
Identity = 60/186 (32.26%), Postives = 91/186 (48.92%), Query Frame = 0
Query:    1 ATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESHHDRFLIREAVMGWLTQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAFEQLRSVLVVGSSXXXXXXXXXXXXXXXXXXXXXXARAHVELYLRVLCALDEEVVSFHVDRSREEADHNSLIKVRM 186
            A  YC  VK S  GWRL LELF  +   E +F+ L  +Q+AL       + +        IR  ++ WL        A ++ +  F++TK+AVV+ +L+K DYP+ W  AF +L ++L +G+S                          VE+Y R+L A++EE+V F   R++ EA  N  IK  M
Sbjct:   36 AETYCNAVKASSTGWRLCLELFEYSEHQEVKFYALQAIQEAL------TKGIADDAVTMQIRSELLAWLR----ANVAFVEGKAPFLKTKLAVVITVLIKRDYPDRWPTAFHELLALLPMGASM-------------------------VEMYFRILTAINEEIVEFDATRTQAEAAANMRIKDAM 186          
BLAST of mRNA_Ecto-sp13_S_contig12101.1791.1 vs. uniprot
Match: A0A2D4BIY3_PYTIN (Exportin-T n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BIY3_PYTIN)

HSP 1 Score: 98.2 bits (243), Expect = 2.030e-20
Identity = 58/186 (31.18%), Postives = 94/186 (50.54%), Query Frame = 0
Query:    1 ATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESHHDRFLIREAVMGWLTQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAFEQLRSVLVVGSSXXXXXXXXXXXXXXXXXXXXXXARAHVELYLRVLCALDEEVVSFHVDRSREEADHNSLIKVRM 186
            A  +C+ VK S  GWR  LELF ++   + +F+ L  LQ+ L       + +ES      +  A++ W+     G  A ++ +  +++TK+AVV+ LL+K DYP  W  AF +L ++L +G+S                          VE+Y R+L A++EE+V F  +R++ EA  N  IK  M
Sbjct:   45 AESFCDRVKASPTGWRACLELFEMSAHAQVKFYALQALQEML------TKGIESEAVTAEMHTALLAWMR----GNVAYIEREAPYLKTKLAVVITLLIKDDYPYRWPTAFTELIALLPLGASM-------------------------VEMYFRILIAINEEIVEFDANRTQLEAAANMRIKDAM 195          
BLAST of mRNA_Ecto-sp13_S_contig12101.1791.1 vs. uniprot
Match: D0NEB4_PHYIT (Exportin-T n=21 Tax=Phytophthora TaxID=4783 RepID=D0NEB4_PHYIT)

HSP 1 Score: 97.1 bits (240), Expect = 5.130e-20
Identity = 60/186 (32.26%), Postives = 92/186 (49.46%), Query Frame = 0
Query:    1 ATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESHHDRFLIREAVMGWLTQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAFEQLRSVLVVGSSXXXXXXXXXXXXXXXXXXXXXXARAHVELYLRVLCALDEEVVSFHVDRSREEADHNSLIKVRM 186
            A  +C  VK   DGWR  L+LF  +   + +F+ L  LQ+AL    G    V        +R  ++ WL        A ++++  F++TK+AVV+ LL+K DYP+ W  AF +L ++L  G+S                          VE+Y R+L A++EE+V F   R+++EA HN  IK  M
Sbjct:   14 AFHFCNAVKAQADGWRAELQLFEHSEHEQVKFYALQALQEALAK--GVADDVA-----LAVRVELLAWLQS----HVAYVESKSPFLKTKLAVVITLLIKRDYPDRWPTAFTELLALLPQGASI-------------------------VEMYFRILQAINEEIVEFDAQRTQQEAAHNMRIKDAM 163          
BLAST of mRNA_Ecto-sp13_S_contig12101.1791.1 vs. uniprot
Match: A0A225UNV2_9STRA (Exportin-T (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UNV2_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.540e-19
Identity = 58/186 (31.18%), Postives = 90/186 (48.39%), Query Frame = 0
Query:    1 ATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESHHDRFLIREAVMGWLTQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAFEQLRSVLVVGSSXXXXXXXXXXXXXXXXXXXXXXARAHVELYLRVLCALDEEVVSFHVDRSREEADHNSLIKVRM 186
            A  +C  VK   DGWR  L+LF  +   + +F+ L  LQ+AL         V        +R  ++ WL        A ++ +  +++TK+AVV+ LL+K DYP+ W  AF +L ++L  G+S                          VE+Y R+L A++EE+V F   R+++EA HN  IK  M
Sbjct:   34 AESFCNAVKSQADGWRAELQLFEHSEHEQVKFYALQALQEALTGGVADDISV-------AVRVELLAWLQS----HVAYVETKAPYLKTKLAVVITLLIKRDYPDRWPTAFTELLALLPQGASI-------------------------VEMYFRILLAINEEIVEFDAQRTQQEAAHNMRIKDAM 183          
BLAST of mRNA_Ecto-sp13_S_contig12101.1791.1 vs. uniprot
Match: K3X0X9_GLOUD (Exportin-T n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0X9_GLOUD)

HSP 1 Score: 95.5 bits (236), Expect = 1.760e-19
Identity = 61/186 (32.80%), Postives = 93/186 (50.00%), Query Frame = 0
Query:    1 ATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESHHDRFLIREAVMGWLTQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAFEQLRSVLVVGSSXXXXXXXXXXXXXXXXXXXXXXARAHVELYLRVLCALDEEVVSFHVDRSREEADHNSLIKVRM 186
            A  +C  +K S DGWR  LELF  +   E +F+ L  LQ+AL    G    V +      IR  ++ WL +      + ++ +  +++TK+AVV+ LL+K DYP+ W  AF +L ++L  G+S                          VE+Y R+L A++EE+V F   RS+ EA+ N  IK  M
Sbjct:   35 AESFCNSIKASVDGWRYELELFEFSEHQEVKFYALQALQEALVK--GVEDVVSAQ-----IRTELLTWLQE----NVSFVENKAPYLKTKLAVVITLLIKRDYPDRWPTAFFELMALLPKGASM-------------------------VEMYFRILVAINEEIVEFDAQRSQAEANANMRIKDAM 184          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12101.1791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KV38_9PHAE2.780e-10293.55Exportin-T (Fragment) n=1 Tax=Ectocarpus sp. CCAP ... [more]
D7FNT8_ECTSI2.490e-9597.85Exportin-T n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A836CAL0_9STRA1.060e-3544.09Exportin-T n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A662WTQ5_9STRA2.640e-2333.69Exportin-T (Fragment) n=2 Tax=Nothophytophthora sp... [more]
A0A5D6XP74_9STRA5.830e-2336.56Exportin-T n=1 Tax=Pythium brassicum TaxID=1485010... [more]
A0A8K1FDJ6_PYTOL5.920e-2132.26Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BIY3_PYTIN2.030e-2031.18Exportin-T n=2 Tax=Pythium insidiosum TaxID=114742... [more]
D0NEB4_PHYIT5.130e-2032.26Exportin-T n=21 Tax=Phytophthora TaxID=4783 RepID=... [more]
A0A225UNV2_9STRA1.540e-1931.18Exportin-T (Fragment) n=1 Tax=Phytophthora megakar... [more]
K3X0X9_GLOUD1.760e-1932.80Exportin-T n=1 Tax=Globisporangium ultimum (strain... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..186
e-value: 3.5E-34
score: 119.6
IPR013598Exportin-1/Importin-beta-likePFAMPF08389Xpo1coord: 85..184
e-value: 9.3E-12
score: 45.2
IPR040017Exportin-TPANTHERPTHR15952EXPORTIN-T/LOS1coord: 1..183
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12101contigEcto-sp13_S_contig12101:3891..5006 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12101.1791.1mRNA_Ecto-sp13_S_contig12101.1791.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12101 3891..5006 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12101.1791.1 ID=prot_Ecto-sp13_S_contig12101.1791.1|Name=mRNA_Ecto-sp13_S_contig12101.1791.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=187bp
ATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARR
RVESHHDRFLIREAVMGWLTQVGGGGGAELDAQETFIRTKVAVVLALLVK
SDYPETWTDAFEQLRSVLVVGSSNSSGDAAAAAAAAGGGGRSAAAARAHV
ELYLRVLCALDEEVVSFHVDRSREEADHNSLIKVRM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR013598Exportin-1/Importin-b-like
IPR040017XPOT
IPR016024ARM-type_fold