prot_Ecto-sp13_S_contig12030.1735.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12030.1735.1
Unique Nameprot_Ecto-sp13_S_contig12030.1735.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length89
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12030.1735.1 vs. uniprot
Match: D8LD73_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD73_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 2.980e-6
Identity = 30/41 (73.17%), Postives = 33/41 (80.49%), Query Frame = 0 
Query:   49 AVVPRQPAELGRSSPTVSAAVAGPPEQHVADAPSAGGAGTP 89
            A + RQPAE GRSSP V+AAVA PPEQ  A+APSAGGAG P
Sbjct:  456 AALGRQPAEPGRSSPAVTAAVAEPPEQQAANAPSAGGAGMP 496
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12030.1735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LD73_ECTSI2.980e-673.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12030contigEcto-sp13_S_contig12030:3458..4140 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12030.1735.1mRNA_Ecto-sp13_S_contig12030.1735.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12030 3456..4140 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12030.1735.1 ID=prot_Ecto-sp13_S_contig12030.1735.1|Name=mRNA_Ecto-sp13_S_contig12030.1735.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=89bp
RGGEKSGNPDEIVPGPGGHLPAETHRQEGGGVSNGGGGGGGGDPFSPVAV
VPRQPAELGRSSPTVSAAVAGPPEQHVADAPSAGGAGTP
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