prot_Ecto-sp13_S_contig12029.1732.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12029.1732.1
Unique Nameprot_Ecto-sp13_S_contig12029.1732.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length241
Homology
BLAST of mRNA_Ecto-sp13_S_contig12029.1732.1 vs. uniprot
Match: D8LU13_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU13_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 1.170e-124
Identity = 188/218 (86.24%), Postives = 193/218 (88.53%), Query Frame = 0
Query:   33 MPLYFGNSDGSEETCFRPTLPGMRRSCSECGRKKKSCDGRRPCGRCVRTGSHCRYSKRRWHLPQPHGQEQHQPGA----------VLLQSSPSGALVSAARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPATLQRPAVGGGCDEEALFDAIARGADLIKASERHQFPMNPRSCTFWCAIALGALAKGSSFQSV 240
            M LYFGNSDG +ETC  PTLPGMRRSCSECGRKKKSCDGRRPCGRCVRTGS+C YSKRRWHLPQPHGQ QHQP            VLLQSSP  ALVS+ARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMV+IMATPATLQRPAVGGGCDEEALFDAIARG DLI ASE HQ PMNPRSCTFWCAIALGALAKGS F+SV
Sbjct:    1 MTLYFGNSDGRKETCLPPTLPGMRRSCSECGRKKKSCDGRRPCGRCVRTGSNCTYSKRRWHLPQPHGQ-QHQPRPSRRDRTHRKEVLLQSSPPEALVSSARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVQIMATPATLQRPAVGGGCDEEALFDAIARGEDLINASEGHQHPMNPRSCTFWCAIALGALAKGSPFESV 217          
BLAST of mRNA_Ecto-sp13_S_contig12029.1732.1 vs. uniprot
Match: A0A6H5JYW4_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW4_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 2.270e-77
Identity = 133/223 (59.64%), Postives = 160/223 (71.75%), Query Frame = 0
Query:   27 IDTSIAMPLYFGNSDGSEETCFRPTLPGMRRSCSECGRKKKSCDGRRPCGRCVRTGSHCRYSKRRWHLPQPHGQEQHQP---------GAVLLQSSPSGALVSAARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPATLQRPAVGGGCDEEALFDAIARGADLIKASERHQFPMNPRSCTFWCAIALGALAKGSSFQSV 240
            +D + A+ L   ++DG + TC RPTLPGMRRSC+ECGRKKK CDG++PC RCV +G  C Y  RRWHL +PH Q+QHQ          G  +LQS+  GALV+   LPLKR RLSASPA GLVGMQE+AFLSDFFGCVGF+PLT+ S IRE MV IMA+PA LQ+ A+GG C E      + R     +ASER+Q PM+  +CTFWCAIALGALAKGS  +SV
Sbjct:    1 MDATSALRLKGNDNDGEKGTCLRPTLPGMRRSCTECGRKKKRCDGQQPCRRCVGSGGQCAYIMRRWHLLKPH-QQQHQSQRPDRDGAHGREVLQSAQPGALVTCGMLPLKRFRLSASPATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVRIMASPAPLQQSAIGGACSE---VGTMVRAPCWNEASERNQLPMDASTCTFWCAIALGALAKGSPVESV 219          
BLAST of mRNA_Ecto-sp13_S_contig12029.1732.1 vs. uniprot
Match: D8LU16_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU16_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 3.650e-67
Identity = 126/213 (59.15%), Postives = 144/213 (67.61%), Query Frame = 0
Query:   27 IDTSIAMPLYFGNSDGSEETCFRPTLPGMRRSCSECGRKKKSCDGRRPCGRCVRTGSHCRYSKRRWHLPQPHGQEQ-HQP-------GAVLLQSSPSGALVSAARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPATLQRPAVGGGCDEEALFDAIARGADLIKASERHQFPMNPRSCTFWCAIALGAL 231
            +DTS   P   GN+D    TC RP LPG+RRSCSECGRKKK CDG+RPC RCVR+GS C YSKRR  L Q H Q    QP       G V L S+P GAL ++ RLPL R  LSASPA GLVGMQE+AFLSDFFGCVGFLPLTT+S IRE MV IM +PA +++  VGG       FD+IA G +  KAS  HQ PMNP +CTFW    +G L
Sbjct:    1 MDTSGTEPSK-GNNDDGTATCLRPILPGIRRSCSECGRKKKRCDGQRPCRRCVRSGSQCTYSKRRRRLLQTHKQTHLRQPDRDGAHGGEVPLHSTPPGALATSGRLPLARFGLSASPATGLVGMQENAFLSDFFGCVGFLPLTTQSHIRETMVNIMVSPA-IRQSFVGGDFGAGGPFDSIAGGVEWSKASGGHQLPMNPSTCTFWAWAIMGYL 211          
BLAST of mRNA_Ecto-sp13_S_contig12029.1732.1 vs. uniprot
Match: A0A6H5JZG3_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZG3_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 5.400e-54
Identity = 101/200 (50.50%), Postives = 125/200 (62.50%), Query Frame = 0
Query:   50 PTLPGMRRSCSECGRKKKSCDGRRPCGRCVRTGSHCRYSKRRWHLPQPHGQEQHQ---------PGAVLLQSSPSGALVSAARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPATLQRPAVGGGCDEEALFDAIARGADLIKASERHQFPMNPRSCTFWCAIALGALAKGSSFQSV 240
            P   GMRRSCSECGRKK+ CDG  PC RCV +GS C Y KRR HLP+ H +++ +         PG    QS+P+ A  +   L LKR +  ASPA GLVGM E+ FL DFF CVGF+PLTT+S IRE MV++M T    Q+ A G  CDE+   D +A+  D+   S  +Q    P +CTFWCA+ALGAL KG    SV
Sbjct:    9 PATLGMRRSCSECGRKKRKCDGLMPCRRCVDSGSRCVYEKRRCHLPRAHHEQRQRRRLGHDGVPPGGATKQSAPAVAASACEMLALKRCKFKASPATGLVGMPENTFLGDFFACVGFVPLTTQSHIRETMVKMMVTSTPSQKSAFGRDCDED---DVLAKEGDIRILSAENQLDAGPSTCTFWCAVALGALVKGGGVASV 205          
BLAST of mRNA_Ecto-sp13_S_contig12029.1732.1 vs. uniprot
Match: D8LU08_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU08_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 7.190e-53
Identity = 107/218 (49.08%), Postives = 134/218 (61.47%), Query Frame = 0
Query:   28 DTSIAMPLYFGNSDGSEE---TCFRPTLPGMRRSCSECGRKKKSCDGRRPCGRCVRTGSHCRYSKRRWHLPQPHGQEQ-----HQPGA----VLLQSSPSGALVSAARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPATLQRPAVGGGCDEEALFDAIARGADLIKASERHQFPMNPRSCTFWCAIALGALAK 233
            +TS   P   GNS    +   TC RPTL GMRRSCSECGRKKK         RCV++ S C++SKRRWHLP+P  QE      H  G      LL+++P G   ++  LP+KR RLSASPA+GLVGMQE+ FL+DFFGCVGFLPLTT+  IRE MV++MA+PA+ ++ A G  CDE    + +                M P +C FWCA+ALGAL  
Sbjct:    3 ETSTVQPNSGGNSSYGRQGHGTCLRPTLFGMRRSCSECGRKKKR--------RCVKSRSPCKFSKRRWHLPKPPQQEGRPQRLHGDGTHGREPLLKATPPGEFATSGLLPMKRFRLSASPAIGLVGMQENTFLTDFFGCVGFLPLTTQRHIRETMVKMMASPASRRQSAAGTDCDEAPELNLL----------------MGPSTCIFWCAVALGALVS 196          
BLAST of mRNA_Ecto-sp13_S_contig12029.1732.1 vs. uniprot
Match: A0A6H5JBJ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ1_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 1.560e-50
Identity = 101/194 (52.06%), Postives = 118/194 (60.82%), Query Frame = 0
Query:   54 GMRRSCSECGRKKKSCDGRRPCGRCVRTGSHCRYSKRRWHLPQPHGQEQHQP-------GAVLLQSSPSGALVSAARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPATLQRPAVGGGCDEEALFDAIARGADLIKASERHQFPMNPRSCTFWCAIALGALAKGSSFQSV 240
            GMRRSC ECGRKK+ CDG  PC RC+R+G  C YSKR+ H PQ   Q Q +P          LL+ S SGAL ++  LPLKR RLSASPA GLVGMQE+AFLSDFFGCVGFLPLTT S IR  MV +M       +        E+  FDAI     +   S   Q    P +CTFWCA+ +GAL  GS  + V
Sbjct:   17 GMRRSCCECGRKKRKCDGMAPCSRCLRSGVQCTYSKRKPHQPQTQHQHQRRPRGPACMPSTELLRHSSSGALQASGMLPLKRFRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHQLGASYDSPEQCQFDAILTEDGITTGS---QLSTGPSACTFWCAVGVGALVNGSPVELV 207          
BLAST of mRNA_Ecto-sp13_S_contig12029.1732.1 vs. uniprot
Match: A0A6H5K8E7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8E7_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 4.790e-49
Identity = 100/200 (50.00%), Postives = 120/200 (60.00%), Query Frame = 0
Query:   54 GMRRSCSECGRKKKSCDGRRPCGRCVRTGSHCRYSKRRWHLPQPHGQEQHQPG-------AVLLQSSPSGALVSAARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPATLQRPAVGGGCDEEALF------DAIARGADLIKASERHQFPMNPRSCTFWCAIALGALAKGSSFQSV 240
            GMR+SC  CGRKK+ CDG  PC RC+R G  C YSKR+ H PQ   Q Q +P        A + + S SG L+    LPLKRL+LSASPA GLVGMQE+AFLSDFFGCVGF+P T+RS IR AMV +MA      +P       E++ F      D I  G  L+           P  CTFWCA+ +GALAKGS  +SV
Sbjct:   17 GMRKSCGACGRKKRKCDGLMPCSRCLRAGVRCTYSKRKPHQPQLGRQHQRRPRGPAGVQTADMFRPSASGTLLPGGMLPLKRLKLSASPATGLVGMQENAFLSDFFGCVGFMPFTSRSHIRGAMVRMMARSTAQHQPGARHNSPEQSQFGDTFTEDGITPGNQLLTG---------PSCCTFWCAVGMGALAKGSPVESV 207          
BLAST of mRNA_Ecto-sp13_S_contig12029.1732.1 vs. uniprot
Match: D8LU27_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU27_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 5.300e-44
Identity = 93/191 (48.69%), Postives = 113/191 (59.16%), Query Frame = 0
Query:   55 MRRSCSECGRKKKSCDGRRPCGRCVRTGSHCRYSKRRWHLPQPHGQEQHQ-----PGAVLLQSSPSGALVSAARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPATLQRPAVGGGCDEEALFDAIARGADLIKASERHQFPMNPRSCTFWCAIALGALAKGSSFQSV 240
            MRRSC EC R KK CDG  PC RC+  G  C Y KR+   PQ   ++Q +         L + S SGA ++   LPLKR RLSASPA GLVGMQE+AFLSDFFGCVGFLPLTTRS +R AMV +MA  A   +        ++  F AI     +   +   Q    P +CTFWCA+ +GAL KG   +SV
Sbjct:   17 MRRSCCECARHKKKCDGLTPCSRCIGAGVQCIYIKRKSTHPQYQRKQQLRGLAGTQSTELQRHSLSGAFLARDTLPLKRCRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTRSHVRGAMVRMMAHSAAQHQLRARHDTPDQGQFGAIFSEDGITTGN---QLSTGPSACTFWCAVGVGALVKGRPAESV 204          
BLAST of mRNA_Ecto-sp13_S_contig12029.1732.1 vs. uniprot
Match: D8LCV1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV1_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 1.280e-43
Identity = 80/118 (67.80%), Postives = 90/118 (76.27%), Query Frame = 0
Query:  124 LPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPATLQRPAVGGGCDEEA-LFDAIARGADLIKASERHQFPMNPRSCTFWCAIALGALAKGSSFQSV 240
            LP KR RLSASPA GLVGMQE+AFLSDFFGCVGFLPLTT S IRE MV IM   A+ Q+   G  CDE    F+A+A G DL K S R+QFPM+P +CTFWCA+ALGALAKGS  +SV
Sbjct:    6 LPFKRCRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTPSHIRETMVTIMLPRASSQQSVFGDDCDEGGHYFEAVAPGGDLSKTSARNQFPMDPSACTFWCAVALGALAKGSPIESV 123          
BLAST of mRNA_Ecto-sp13_S_contig12029.1732.1 vs. uniprot
Match: D8LU14_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU14_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 2.130e-43
Identity = 69/82 (84.15%), Postives = 74/82 (90.24%), Query Frame = 0
Query:  142 MQESAFLSDFFGCVGFLPLTTRSTIREAMVEIMATPATLQRPAVGGGCDEEALFDAIARGADLIKASERHQFPMNPRSCTFW 223
            MQE+AFLSDFFGCVGFLPLT +STIRE MV+I+ TPATLQRP V GGCDEEA+FDAIARGADLIKASE HQ PMNPRSC FW
Sbjct:    1 MQENAFLSDFFGCVGFLPLTNQSTIREVMVQILTTPATLQRPPVAGGCDEEAVFDAIARGADLIKASEGHQLPMNPRSCIFW 82          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12029.1732.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU13_ECTSI1.170e-12486.24Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5JYW4_9PHAE2.270e-7759.64Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LU16_ECTSI3.650e-6759.15Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5JZG3_9PHAE5.400e-5450.50Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LU08_ECTSI7.190e-5349.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBJ1_9PHAE1.560e-5052.06Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5K8E7_9PHAE4.790e-4950.00Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LU27_ECTSI5.300e-4448.69Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LCV1_ECTSI1.280e-4367.80Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D8LU14_ECTSI2.130e-4384.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 53..96
e-value: 2.8E-5
score: 33.6
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 57..90
e-value: 1.0E-6
score: 28.8
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 58..87
score: 10.051
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 54..106
e-value: 2.5E-7
score: 32.5
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 50..93
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..240
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.747

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12029contigEcto-sp13_S_contig12029:400..5177 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12029.1732.1mRNA_Ecto-sp13_S_contig12029.1732.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12029 400..5177 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12029.1732.1 ID=prot_Ecto-sp13_S_contig12029.1732.1|Name=mRNA_Ecto-sp13_S_contig12029.1732.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=241bp
PVTCSSPPLFLFAGAVLCTAVHATPSIDTSIAMPLYFGNSDGSEETCFRP
TLPGMRRSCSECGRKKKSCDGRRPCGRCVRTGSHCRYSKRRWHLPQPHGQ
EQHQPGAVLLQSSPSGALVSAARLPLKRLRLSASPAVGLVGMQESAFLSD
FFGCVGFLPLTTRSTIREAMVEIMATPATLQRPAVGGGCDEEALFDAIAR
GADLIKASERHQFPMNPRSCTFWCAIALGALAKGSSFQSV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf