prot_Ecto-sp13_S_contig1202.1728.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1202.1728.1
Unique Nameprot_Ecto-sp13_S_contig1202.1728.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length454
Homology
BLAST of mRNA_Ecto-sp13_S_contig1202.1728.1 vs. uniprot
Match: D7FWN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWN7_ECTSI)

HSP 1 Score: 541 bits (1394), Expect = 1.600e-188
Identity = 372/456 (81.58%), Postives = 382/456 (83.77%), Query Frame = 0
Query:    1 MDVDTSWRRKRPAEEEEDYLASKRYISEKFFNMRISHPDAPGLNGAGLMWQGAAEKAAEVGSGDLAA--GVDCSSMSDEEDISTATGRRPTAAASSVLNEGAAFGDLAPLDEDXXXXXXXXXXXXXXXXXXXPPTPHPFLRSTSSAIDEKVDDWVRTSRHRMLADASINSAPDLCRALIPYQPVAGLMPSA-PAADSAGDEEGRASGYDSGEAGGDPTPXXXXXXXXXXXTAPTAXXXXXXXXXXXXLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAGSLFGPPPRGLCTAQSGGDDAGGALMMRDDSGVTSMREDSEAAMRLQDGDAGERGDGALPAAAAASXXXXXXXXDGTDMAPPDPIPLSRIGSSRGAPTPELTPERAAWARAAPQRRREARGEEDPDEIAGATNARPPLTAQSWAQQW 453
            MDVDTSWRRKRPAEEEEDY+ASKRYISEKFFNMRISHPDAPGL+GAGLMWQGAA+KAA VG+GDLAA  GVDCSSMSDEEDISTATG+RP AAA SV +EGAAFG+LA LDEDXXXXXXXXXXXXXXXXXXXPPTPHPFLRSTSSAIDEKVDDWVRTSRHRMLADASINSAPDLCRALIPYQPVAGLMPSA PAADS GDEEGR SGYD+GEAGGDPTPXXXXXXXXXXX     XXXXXXXXX   LG                              XXXXXXXXXXXXX          XXXXDVAGSLFGPPPRGLCTAQSGGDDAGGALMMRDDS       DSEAAMRL+DGDAG RGDG L AAAA  XXXXX   DGTDMAPPD IPLSRIGSSRGAPTPELTPERAAWARAAPQRRREARGEEDPDEIAGATNARPPLTAQSWAQ+W
Sbjct:    1 MDVDTSWRRKRPAEEEEDYMASKRYISEKFFNMRISHPDAPGLHGAGLMWQGAADKAAGVGTGDLAAEAGVDCSSMSDEEDISTATGQRPPAAAPSVFSEGAAFGNLASLDEDXXXXXXXXXXXXXXXXXXXPPTPHPFLRSTSSAIDEKVDDWVRTSRHRMLADASINSAPDLCRALIPYQPVAGLMPSAAPAADSTGDEEGRTSGYDNGEAGGDPTPXXXXXXXXXXXXX-XXXXXXXXXXXAVMLGGGRGCEQSAGSSTAEAAGFAGAGGRTGGHSXXXXXXXXXXXXXDQGKGRKHLHXXXXDVAGSLFGPPPRGLCTAQSGGDDAGGALMMRDDSXXXXXXXDSEAAMRLRDGDAGGRGDGTLTAAAAXXXXXXXMDMDGTDMAPPDAIPLSRIGSSRGAPTPELTPERAAWARAAPQRRREARGEEDPDEIAGATNARPPLTAQSWAQRW 455          
BLAST of mRNA_Ecto-sp13_S_contig1202.1728.1 vs. uniprot
Match: A0A6H5KNS1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNS1_9PHAE)

HSP 1 Score: 477 bits (1227), Expect = 3.110e-163
Identity = 327/454 (72.03%), Postives = 334/454 (73.57%), Query Frame = 0
Query:    1 MDVDTSWRRKRPAEEEEDYLASKRYISEKFFNMRISHPDAPGLNGAGLMWQGAAEKAAEVGSGDLAAGVDCSSMSDEEDISTATGRRPTAAASSVLNEGAAFGDLAPLDEDXXXXXXXXXXXXXXXXXXXPPTPHPFLRSTSSAIDEKVDDWVRTSRHRMLADASINSAPDLCRALIPYQPVAGLMP-SAPAADSAGDEEGRASGYDSGEAGGDPTPXXXXXXXXXXXTAPTAXXXXXXXXXXXXLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAGSLFGPPPRGLCTAQSGGDDAGGALMMRDDSGVTSMREDSEAAMRLQDGDAGERGDGALPAAAAASXXXXXXXXDGTDMAPPDPIPLSRIGSSRGAPTPELTPERAAWARAAPQRRREARGEEDPDEIAGATNARPPLTAQSWAQQW 453
            MDVDTSWRRKRPAEEEEDYLASKRYISEKFFNMRISHPDAPGL  AGLMWQGAA+K A VGSGDLAAGVDCSSMSDEEDISTAT RRP AAA +V  + AAFGDLA LDEDXXXXXXXXXXXXXXXXXXXPPTPHPFLRSTSSAIDEKVDDWVRTSRHRMLADAS+NSAPDLCRALIPYQP+AGLMP +APAADS GDEEGRAS YDSGEAGGDPTP XXXXXXXXXX     XXXXXXX     L                                                    XXXXXX                           LMM DDSG  SMREDSEAAMRLQDGDAGE  DGALPAAAAAS        DGTDMAPPDPIPLSRIGSSRGAPTPELTPERAAWARAAPQR+REAR EEDPDEI GATNA PPLTAQSWAQQW
Sbjct:    1 MDVDTSWRRKRPAEEEEDYLASKRYISEKFFNMRISHPDAPGLKEAGLMWQGAADKPAGVGSGDLAAGVDCSSMSDEEDISTATVRRPPAAAPNVFTQSAAFGDLASLDEDXXXXXXXXXXXXXXXXXXXPPTPHPFLRSTSSAIDEKVDDWVRTSRHRMLADASVNSAPDLCRALIPYQPLAGLMPLAAPAADSTGDEEGRASDYDSGEAGGDPTPSXXXXXXXXXXXXXXXXXXXXXXLGAVMLRGERGCEQSAGSSTAEAAGFAGAGGRAGGHLHGYANANGVGGGSDQGKGRNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMMCDDSGTASMREDSEAAMRLQDGDAGEWEDGALPAAAAASADAMDM--DGTDMAPPDPIPLSRIGSSRGAPTPELTPERAAWARAAPQRKREARSEEDPDEIFGATNATPPLTAQSWAQQW 452          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1202.1728.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWN7_ECTSI1.600e-18881.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNS1_9PHAE3.110e-16372.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1202contigEcto-sp13_S_contig1202:5622..8915 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1202.1728.1mRNA_Ecto-sp13_S_contig1202.1728.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1202 5622..10215 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1202.1728.1 ID=prot_Ecto-sp13_S_contig1202.1728.1|Name=mRNA_Ecto-sp13_S_contig1202.1728.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=454bp
MDVDTSWRRKRPAEEEEDYLASKRYISEKFFNMRISHPDAPGLNGAGLMW
QGAAEKAAEVGSGDLAAGVDCSSMSDEEDISTATGRRPTAAASSVLNEGA
AFGDLAPLDEDDDASGSDDGAGDTSSAGGGPPTPHPFLRSTSSAIDEKVD
DWVRTSRHRMLADASINSAPDLCRALIPYQPVAGLMPSAPAADSAGDEEG
RASGYDSGEAGGDPTPSPQAGGDGGGETAPTAAAAASAGLGAVMLGGGRG
REQSAGSGTAEAAGFAGAGGRTGGHPHGYASGNGGGGGSDQGKGRNHHRH
HHHDVAGSLFGPPPRGLCTAQSGGDDAGGALMMRDDSGVTSMREDSEAAM
RLQDGDAGERGDGALPAAAAASADAEAMDMDGTDMAPPDPIPLSRIGSSR
GAPTPELTPERAAWARAAPQRRREARGEEDPDEIAGATNARPPLTAQSWA
QQW*
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