prot_Ecto-sp13_S_contig1200.1717.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1200.1717.1
Unique Nameprot_Ecto-sp13_S_contig1200.1717.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length194
Homology
BLAST of mRNA_Ecto-sp13_S_contig1200.1717.1 vs. uniprot
Match: D8LI27_ECTSI (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI27_ECTSI)

HSP 1 Score: 376 bits (966), Expect = 7.670e-132
Identity = 188/193 (97.41%), Postives = 191/193 (98.96%), Query Frame = 0
Query:    1 MLSSFLSCGVSVSLLAACNGFVTTAGVLPTRTRAQASQGLSMAASSEQWIPILPIDEAPTPGTAKSVYVADLDLCVAADEKGLLYVLGNKCPPANQPLSFSLVSNNVIKDPVLGTKIDIETGDVIEWCPNLLGKLLSPILGAQPENAGVQTFVVRQKGGNLEAKVNVNAKAEFEKSYWTGILDAQGKADGGYY 193
            MLSS LSCGVSVSLLAACNGFVTTAGVLPTRTRAQASQGLSMAAS EQW+PILPIDEAPTPGTAKSVYVADLDLCVAADE+GLLYVLGNKCPPANQPLSFSLVSNN+IKDPVLGTKIDIETGDVIEWCPNLLGKLLSPILGAQPENAGVQTFVVRQKGGNLEAKVNVNAKAEFEKSYWTGILDAQGKADGGYY
Sbjct:    2 MLSSLLSCGVSVSLLAACNGFVTTAGVLPTRTRAQASQGLSMAASGEQWVPILPIDEAPTPGTAKSVYVADLDLCVAADERGLLYVLGNKCPPANQPLSFSLVSNNIIKDPVLGTKIDIETGDVIEWCPNLLGKLLSPILGAQPENAGVQTFVVRQKGGNLEAKVNVNAKAEFEKSYWTGILDAQGKADGGYY 194          
BLAST of mRNA_Ecto-sp13_S_contig1200.1717.1 vs. uniprot
Match: A0A7R9VVY4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VVY4_9STRA)

HSP 1 Score: 170 bits (430), Expect = 2.080e-50
Identity = 84/170 (49.41%), Postives = 115/170 (67.65%), Query Frame = 0
Query:   28 LPTRTRAQASQGLSMAASSEQ---WIPILPIDEAPTPGTAKSVYVADLDLCVAADEKGLLYVLGNKCPPANQPLSFSLVSNNVIKDPVLGTKIDIETGDVI-EWCPNLLGKLLSPILGAQPENAGVQTFVVRQKGGNLEAKVNVNAKAEFEKSYWTGILDAQGKADGGYY 193
            LPT  + ++S  L+MA   +Q   ++P +P+++ P PGTA S     L +C+A D  G +Y LG+KCPP NQPLSF  V+   I+DPVLGTK  ++TG+V+ +WCP+ +GKLL  +     E  GV  F V++ G N+E +V+VNAKA FE  YW+GILDAQGKADG YY
Sbjct:   21 LPTTFQTKSSTALNMAGLFQQSLKYVPCIPVEQLPKPGTATSGVAGGLAICIAVDPSGSIYALGDKCPPVNQPLSFGKVTAGAIEDPVLGTKFSLKTGEVVGDWCPSGIGKLLGGLF----EPVGVPVFPVKKSGANIEVQVDVNAKANFESQYWSGILDAQGKADGKYY 186          
BLAST of mRNA_Ecto-sp13_S_contig1200.1717.1 vs. uniprot
Match: A0A8J9X0V7_PHATR (Hypothetical protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X0V7_PHATR)

HSP 1 Score: 166 bits (420), Expect = 1.780e-49
Identity = 81/147 (55.10%), Postives = 107/147 (72.79%), Query Frame = 0
Query:   49 WIPILPIDEAPTPGTAKSVYVADLDLCVAADEKGLLYVLGNKCPPANQPLSFSLVS-NNVIKDPVLGTKIDIETGDVI-EWCPNLLGKLLSPILGAQPENAGVQTFVVRQKGGNLEAKVNVNAKAEFEKSYWTGILDAQGKADGGYY 193
            ++P +P+ E P PG+A S     L +C+A D+KG +Y LG+KCPP NQPLSF  V+ +  I+DPVLGTK  ++TGDV+  WCP+ +GKLL    G     +GV T+ VRQ+GG+LE +V+VN KA FEKSYWTG+LDAQGK+DG YY
Sbjct:    1 YVPCIPLSELPKPGSATSGIAGGLAICIAVDKKGSVYALGDKCPPVNQPLSFGKVNPDGTIQDPVLGTKFSLKTGDVVGAWCPSGIGKLL----GGAFTPSGVPTYPVRQRGGSLEVQVDVNYKANFEKSYWTGVLDAQGKSDGTYY 143          
BLAST of mRNA_Ecto-sp13_S_contig1200.1717.1 vs. uniprot
Match: A0A7S0AYK8_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AYK8_9STRA)

HSP 1 Score: 167 bits (422), Expect = 5.360e-49
Identity = 84/185 (45.41%), Postives = 120/185 (64.86%), Query Frame = 0
Query:   10 VSVSLLAACNGFVTTAGVLPTRTRAQASQGLSMAASSEQWIPILPIDEAPTPGTAKSVYVADLDLCVAADEKGLLYVLGNKCPPANQPLSFSLVSNNVIKDPVLGTKIDIETGDVI-EWCPNLLGKLLSPILGAQPENAGVQTFVVRQKGGNLEAKVNVNAKAEFEKSYWTGILDAQGKADGGYY 193
            V+ +L+A+   F   +    T T  +A +     AS  Q++P +P+D+ P PG+A S     L +C+A D  G +Y LG+KCPP NQPLSF  V  N I+DPVLGTK  ++TG+V+  WCP+ +GKLL  +     +  GV T+ V++KG N+E +V+VNAKA FE  YW+G+LDAQGK++G YY
Sbjct:   25 VAATLIASAAAFAPQSANTRTNTALEAGK----LASKMQYVPCIPVDKLPAPGSATSGVAGGLAICIAVDPSGSVYALGDKCPPVNQPLSFGRVDGNSIEDPVLGTKFSLKTGEVVGAWCPSGIGKLLGGLF----DPIGVPTYPVKKKGANIEVQVDVNAKANFESQYWSGVLDAQGKSNGKYY 201          
BLAST of mRNA_Ecto-sp13_S_contig1200.1717.1 vs. uniprot
Match: A0A7S1DYV2_9STRA (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1DYV2_9STRA)

HSP 1 Score: 161 bits (407), Expect = 8.280e-47
Identity = 86/187 (45.99%), Postives = 119/187 (63.64%), Query Frame = 0
Query:   10 VSVSLLAACNGFVTTAGVLPTRTRAQASQGLSMAA--SSEQWIPILPIDEAPTPGTAKSVYVADLDLCVAADEKGLLYVLGNKCPPANQPLSFSLVSNN-VIKDPVLGTKIDIETGDVIEWCPNLLGKLLSPILGAQPENAGVQTFVVRQKGGNLEAKVNVNAKAEFEKSYWTGILDAQGKADGGYY 193
            +  +L+AA   F  T    P +   ++   L+MA   S ++++P L + + P PG A S     L +C+A D KG +Y LG+KCPP NQPLSF  V+N+  I+DPVLGTK  ++TGDV+ WCP  +GK    I+G   E  GV  F VRQ  G ++ +V+VNAKA FE +YW+G+LDAQGKA+G YY
Sbjct:   17 IFATLVAASAAFTGT----PLKAVVKSDTALNMALLPSKKKFVPCLSLKDLPKPGFATSGVAGGLAICIAVDPKGSVYALGDKCPPVNQPLSFGKVNNDGTIEDPVLGTKFSLKTGDVVSWCPTGVGK----IIGGLFEPTGVPNFKVRQSSGTIQVEVDVNAKANFEANYWSGVLDAQGKANGKYY 195          
BLAST of mRNA_Ecto-sp13_S_contig1200.1717.1 vs. uniprot
Match: A0A7S4J166_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J166_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.310e-46
Identity = 80/170 (47.06%), Postives = 113/170 (66.47%), Query Frame = 0
Query:   29 PTRTRAQASQGLSMA----ASSEQWIPILPIDEAPTPGTAKSVYVADLDLCVAADEKGLLYVLGNKCPPANQPLSFSLVSNNVIKDPVLGTKIDIETGDVI-EWCPNLLGKLLSPILGAQPENAGVQTFVVRQKGGNLEAKVNVNAKAEFEKSYWTGILDAQGKADGGYY 193
            PT  + ++S  LSMA      S +++P +P+D  P PGTA S     L +C+A D  G ++ LG+KCPP NQPLSF  V++  I+DPVLGTK  +++GDV+  WCP+ +GKLL  +     +  GV  + V++ G N+E +V+VNAKA +E  YW+G+LDAQGKADG YY
Sbjct:  119 PTTFQTKSSTALSMAKKPLGQSLKYVPCIPVDSLPKPGTATSGVAGGLAICIAVDPSGSIFALGDKCPPVNQPLSFGKVADGTIEDPVLGTKFSLKSGDVVGAWCPSGIGKLLGGLF----DPYGVPVYPVKKSGANIEVQVDVNAKANYESQYWSGVLDAQGKADGKYY 284          
BLAST of mRNA_Ecto-sp13_S_contig1200.1717.1 vs. uniprot
Match: A0A7S2E968_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E968_TRICV)

HSP 1 Score: 159 bits (403), Expect = 2.320e-46
Identity = 80/169 (47.34%), Postives = 110/169 (65.09%), Query Frame = 0
Query:   29 PTRTRAQASQGLSMAA---SSEQWIPILPIDEAPTPGTAKSVYVADLDLCVAADEKGLLYVLGNKCPPANQPLSFSLVSNNVIKDPVLGTKIDIETGDVI-EWCPNLLGKLLSPILGAQPENAGVQTFVVRQKGGNLEAKVNVNAKAEFEKSYWTGILDAQGKADGGYY 193
            P     ++S  L+MA    S  Q++P + +D+ P PG A S     L +C+A D  G ++ LG+KCPP NQPLSF  VS   I+DPVLGTK  ++TG+V+  WCP+ +GKLL  +     E +GV  + V++ G N+E +V+VNAKA FE  YW+G+LDAQGKADG YY
Sbjct:   19 PVAFETKSSTALNMAKAFPSKLQYVPCVAVDKLPKPGLATSGVAGGLAICIAVDPSGSVFALGDKCPPVNQPLSFGRVSEGTIEDPVLGTKFSLKTGEVVGPWCPSGIGKLLGGLF----EPSGVPVYPVKKAGANIEVQVDVNAKANFESQYWSGVLDAQGKADGKYY 183          
BLAST of mRNA_Ecto-sp13_S_contig1200.1717.1 vs. uniprot
Match: A0A6U5FSV0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5FSV0_9STRA)

HSP 1 Score: 159 bits (403), Expect = 2.620e-46
Identity = 79/190 (41.58%), Postives = 115/190 (60.53%), Query Frame = 0
Query:    4 SFLSCGVSVSLLAACNGFVTTAGVLPTRTRAQASQGLSMAASSEQWIPILPIDEAPTPGTAKSVYVADLDLCVAADEKGLLYVLGNKCPPANQPLSFSLVSNNVIKDPVLGTKIDIETGDVIEWCPNLLGKLLSPILGAQPENAGVQTFVVRQKGGNLEAKVNVNAKAEFEKSYWTGILDAQGKADGGYY 193
            +F    V  +L+A+   F       P  TR+           + +++P++  ++AP PG+A S     L +CVA    G LY LG+KCPP NQPLSF  V+ + I+DPVLGTK  ++TG+V++WCP  +GKL+  +     E AGV T+ ++  G N+E +V+VN K  FE  YW+G+LDAQGKA+G YY
Sbjct:    2 AFFKLTVVAALIASVAAFAPNTSSKPFGTRSSTELSAKKFKQALKYVPVITKEQAPKPGSATSGVAGGLAICVACSPTGQLYALGDKCPPVNQPLSFGKVNKDTIEDPVLGTKFSLKTGEVVDWCPAGIGKLVGGLF----EPAGVPTYPIKSTGKNIEVQVDVNYKLNFEAEYWSGVLDAQGKANGKYY 187          
BLAST of mRNA_Ecto-sp13_S_contig1200.1717.1 vs. uniprot
Match: A0A7S3P6K4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P6K4_9STRA)

HSP 1 Score: 159 bits (401), Expect = 8.000e-46
Identity = 79/160 (49.38%), Postives = 107/160 (66.88%), Query Frame = 0
Query:   37 SQGLSMAASSE---QWIPILPIDEAPTPGTAKSVYVADLDLCVAADEKGLLYVLGNKCPPANQPLSFSLVSNNVIKDPVLGTKIDIETGDVIEWCPNLLGKLLSPILGAQPENAGVQTFVVRQKGGNLEAKVNVNAKAEFEKSYWTGILDAQGKADGGYY 193
            S  L+MAA  +   +++P +PI++ P PG+A S     L +C+A DEKG +Y LG+KCPP NQPLSF  V    I DPVLG+K D++TG+V+ WCP+ LGKLL    G      GV T+ V++ G  +E +V+VN K  FE +YW+GILDAQGK +G YY
Sbjct:   46 STALNMAAKYKPALKYVPCIPIEQLPKPGSATSGEAGGLAICIAVDEKGAIYALGDKCPPVNQPLSFGKVEGGCISDPVLGSKFDLKTGEVVSWCPSGLGKLL----GGAFSPTGVVTYPVKKSGKFVEVQVDVNYKFNFEANYWSGILDAQGKDNGKYY 201          
BLAST of mRNA_Ecto-sp13_S_contig1200.1717.1 vs. uniprot
Match: A0A1Z5JA31_FISSO (Rieske domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JA31_FISSO)

HSP 1 Score: 157 bits (398), Expect = 1.280e-45
Identity = 76/150 (50.67%), Postives = 101/150 (67.33%), Query Frame = 0
Query:   45 SSEQWIPILPIDEAPTPGTAKSVYVADLDLCVAADEKGLLYVLGNKCPPANQPLSFSLVS-NNVIKDPVLGTKIDIETGDVIEWCPNLLGKLLSPILGAQPENAGVQTFVVRQKGGNLEAKVNVNAKAEFEKSYWTGILDAQGKADGGYY 193
            S  ++ P +P+ + P PG A S     L +C+A D KG +Y LG+KCPP NQPLSF  V+ +  I+DP+LGTK  ++TGDV+ WCP+ +GK    ILG      GV  + VRQ+GGN+E +V+VNAK  FE +YW+GILDAQGK  G YY
Sbjct:   37 SKLEYCPCIPLSDLPKPGKATSGVAGGLAICIAVDSKGSVYALGDKCPPINQPLSFGKVNADGTIEDPLLGTKFSLKTGDVVSWCPSGIGK----ILGGAFSPTGVPVYPVRQRGGNIEVQVDVNAKYNFEANYWSGILDAQGKDTGTYY 182          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1200.1717.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI27_ECTSI7.670e-13297.41Rieske domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A7R9VVY4_9STRA2.080e-5049.41Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A8J9X0V7_PHATR1.780e-4955.10Hypothetical protein n=3 Tax=Phaeodactylum tricorn... [more]
A0A7S0AYK8_9STRA5.360e-4945.41Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S1DYV2_9STRA8.280e-4745.99Hypothetical protein n=2 Tax=Bacillariophyta TaxID... [more]
A0A7S4J166_9STRA1.310e-4647.06Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S2E968_TRICV2.320e-4647.34Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6U5FSV0_9STRA2.620e-4641.58Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S3P6K4_9STRA8.000e-4649.38Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A1Z5JA31_FISSO1.280e-4550.67Rieske domain-containing protein n=2 Tax=Fistulife... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012748Rieske-like [2Fe-2S] domain, NirD-typePFAMPF13806Rieske_2coord: 48..162
e-value: 6.5E-10
score: 38.9
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 44..173
e-value: 2.5E-7
score: 32.5
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 48..165
NoneNo IPR availablePANTHERPTHR21496:SF22coord: 13..172
NoneNo IPR availablePANTHERPTHR21496FERREDOXIN-RELATEDcoord: 13..172
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..193
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.673
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 49..163
score: 10.825

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1200contigEcto-sp13_S_contig1200:4306..7239 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1200.1717.1mRNA_Ecto-sp13_S_contig1200.1717.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1200 4303..7239 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1200.1717.1 ID=prot_Ecto-sp13_S_contig1200.1717.1|Name=mRNA_Ecto-sp13_S_contig1200.1717.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=194bp
MLSSFLSCGVSVSLLAACNGFVTTAGVLPTRTRAQASQGLSMAASSEQWI
PILPIDEAPTPGTAKSVYVADLDLCVAADEKGLLYVLGNKCPPANQPLSF
SLVSNNVIKDPVLGTKIDIETGDVIEWCPNLLGKLLSPILGAQPENAGVQ
TFVVRQKGGNLEAKVNVNAKAEFEKSYWTGILDAQGKADGGYY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012748Rieske-like_NirD
IPR036922Rieske_2Fe-2S_sf
IPR017941Rieske_2Fe-2S