prot_Ecto-sp13_S_contig120.1711.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig120.1711.1
Unique Nameprot_Ecto-sp13_S_contig120.1711.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length509
Homology
BLAST of mRNA_Ecto-sp13_S_contig120.1711.1 vs. uniprot
Match: A0A6H5L074_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L074_9PHAE)

HSP 1 Score: 829 bits (2142), Expect = 1.610e-300
Identity = 427/508 (84.06%), Postives = 447/508 (87.99%), Query Frame = 0
Query:    1 MSMYELDRYFADPTTARSVQIVAKGAREVLGEVDPFAPGERPNQIQAFRSYQQGMSTIISAYLGCDQNYRPRKSLIVAAQRMHDSGPKSERSMAVAYVLASENLESFLELMRRLDKPLRQFTGPEQGSPPDRAEIVSGPPPSVHEDPGGAVARPGYRPAKWGVATKVSSAVAEGRGSPRDNPQEPRANVWPSLGKDEGSPHPTRPSSPRMRAFLERLQSGTILSDEGSSSRRGRAPSPPPTPASLSAQATDASSVIEDYLRRCSPRLGGGGGVTFQRVSASENKPSPSEEFPSEMEGVGACSGRISMAGREQRPGRPPATARFSSRDRSASSCGNGAATPGRYSQGRWNSPGSSGDQDPDPRAQGWFAEHGNENWVSVLAEEERGPRFPPDRMDMSGTFGTDMAVASPAQLFDRSGGEFAFVSPKNGSSSSRRAPGSLALRGPDWCLHNYDTAAGGGFRRRLVDQDDDGAWSDGSEEVFPEPDPSDLADGGLPCLSRRPLGDWTAVSP 508
            MSMYELDRYFADPTTARS Q +AKGAREVLGEVDPFAPGERPNQIQAFRSYQQGMSTIIS   GCDQNY  R+SLIVAA+RMHDSGPKSERSMAVAYVLASENLESFLELMRRLD+PLRQFTGPEQGSP DRA+I  G PPSVHEDP G VARP  RPAKWGVATKVSSAVAEGRGS RDNPQEPRANVWPSL +D GS +PTRPSSPRMRAF ERLQ GTI SDE S+SR G+  SP    ASLSAQATDAS VIEDYLRRCSP+L GGGGVTF+R  ASE KPS SEE PSE+EGV ACSGRIS  GREQRP R PATARFSSRD SASS GNG ATPGRYS GRW  PGSSGDQD DP AQ WFAEHGNENWV VLAEEERG RFPP+RMD+SGTFGTDMAV SPAQLFDRSGG+FAF+SP NGSSSSRRAPGS + RGPDWCLH+YDTA GGGFR RLVDQ+DDGAWSDGSEEVFPEPDPSDLADGGLPCLSRRPLGD TA +P
Sbjct:    1 MSMYELDRYFADPTTARSAQNLAKGAREVLGEVDPFAPGERPNQIQAFRSYQQGMSTIISTCPGCDQNYGSRRSLIVAARRMHDSGPKSERSMAVAYVLASENLESFLELMRRLDEPLRQFTGPEQGSPHDRAKIAGGTPPSVHEDPAGVVARPECRPAKWGVATKVSSAVAEGRGSSRDNPQEPRANVWPSLERDGGSSYPTRPSSPRMRAFHERLQRGTIWSDECSTSRGGK--SPXXXXASLSAQATDASPVIEDYLRRCSPQLAGGGGVTFRRAIASEQKPSSSEESPSEIEGVSACSGRISPVGREQRPDRRPATARFSSRDHSASSRGNGVATPGRYSPGRWTPPGSSGDQDSDPWAQAWFAEHGNENWVRVLAEEERGTRFPPNRMDISGTFGTDMAVTSPAQLFDRSGGDFAFISPSNGSSSSRRAPGSPSPRGPDWCLHDYDTATGGGFRSRLVDQEDDGAWSDGSEEVFPEPDPSDLADGGLPCLSRRPLGDSTAAAP 506          
BLAST of mRNA_Ecto-sp13_S_contig120.1711.1 vs. uniprot
Match: D8LJL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJL5_ECTSI)

HSP 1 Score: 436 bits (1122), Expect = 1.790e-148
Identity = 260/508 (51.18%), Postives = 271/508 (53.35%), Query Frame = 0
Query:    1 MSMYELDRYFADPTTARSVQIVAKGAREVLGEVDPFAPGERPNQIQAFRSYQQGMSTIISAYLGCDQNYRPRKSLIVAAQRMHDSGPKSERSMAVAYVLASENLESFLELMRRLDKPLRQFTGPEQGSPPDRAEIVSGPPPSVHEDPGGAVARPGYRPAKWGVATKVSSAVAEGRGSPRDNPQEPRANVWPSLGKDEGSPHPTRPSSPRMRAFLERLQSGTILSDEGSSSRRGRAPSPPPTPASLSAQATDASSVIEDYLRRCSPRLGGGGGVTFQRVSASENKPSPSEEFPSEMEGVGACSGRISMAGREQRPGRPPATARFSSRDRSASSCGNGAATPGRYSQGRWNSPGSSGDQDPDPRAQGWFAEHGNENWVSVLAEEERGPRFPPDRMDMSGTFGTDMAVASPAQLFDRSGGEFAFVSPKNGSSSSRRAPGSLALRGPDWCLHNYDTAAGGGFRRRLVDQDDDGAWSDGSEEVFPEPDPSDLADGGLPCLSRRPLGDWTAVSP 508
            MS YELDRYFADPTTARS QIVAKGAREVLGEVDPFAPGERPNQ+QA                                                                                                                                                                                                          TD  SVIEDYLR CSPRLGGGGGVTFQR   SE+KPS  EEFPSE+EGVGACSGR+S A RE RP R PA ARFSS DR A + GNGAATPGRYS GRW  PG+SGD DPDP A+GWF EHGNENWVSV AEE+RGPRFPPDRMDMS TFGTDMAVASPAQLFDRSGG+ AFVSPK+ SSS RRAPGSLA RGPDWCLH  DTAAGGGFR RLVDQDDDGAWSDGSEEVFPEPDPSDLADGGLPCLSRRPLGDWTAV+P
Sbjct:   14 MSKYELDRYFADPTTARSAQIVAKGAREVLGEVDPFAPGERPNQMQA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TDTPSVIEDYLRPCSPRLGGGGGVTFQRAIGSESKPSSLEEFPSEVEGVGACSGRMSPAERE-RPDRRPAAARFSSGDRPAPNRGNGAATPGRYSPGRWTPPGNSGDLDPDPWARGWFTEHGNENWVSVSAEEDRGPRFPPDRMDMSSTFGTDMAVASPAQLFDRSGGDLAFVSPKHESSSGRRAPGSLAPRGPDWCLHEDDTAAGGGFRSRLVDQDDDGAWSDGSEEVFPEPDPSDLADGGLPCLSRRPLGDWTAVAP 318          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig120.1711.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L074_9PHAE1.610e-30084.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJL5_ECTSI1.790e-14851.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig120contigEcto-sp13_S_contig120:10394..13455 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig120.1711.1mRNA_Ecto-sp13_S_contig120.1711.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig120 10391..13746 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig120.1711.1 ID=prot_Ecto-sp13_S_contig120.1711.1|Name=mRNA_Ecto-sp13_S_contig120.1711.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=509bp
MSMYELDRYFADPTTARSVQIVAKGAREVLGEVDPFAPGERPNQIQAFRS
YQQGMSTIISAYLGCDQNYRPRKSLIVAAQRMHDSGPKSERSMAVAYVLA
SENLESFLELMRRLDKPLRQFTGPEQGSPPDRAEIVSGPPPSVHEDPGGA
VARPGYRPAKWGVATKVSSAVAEGRGSPRDNPQEPRANVWPSLGKDEGSP
HPTRPSSPRMRAFLERLQSGTILSDEGSSSRRGRAPSPPPTPASLSAQAT
DASSVIEDYLRRCSPRLGGGGGVTFQRVSASENKPSPSEEFPSEMEGVGA
CSGRISMAGREQRPGRPPATARFSSRDRSASSCGNGAATPGRYSQGRWNS
PGSSGDQDPDPRAQGWFAEHGNENWVSVLAEEERGPRFPPDRMDMSGTFG
TDMAVASPAQLFDRSGGEFAFVSPKNGSSSSRRAPGSLALRGPDWCLHNY
DTAAGGGFRRRLVDQDDDGAWSDGSEEVFPEPDPSDLADGGLPCLSRRPL
GDWTAVSP*
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