prot_Ecto-sp13_S_contig11993.1699.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11993.1699.1
Unique Nameprot_Ecto-sp13_S_contig11993.1699.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length409
Homology
BLAST of mRNA_Ecto-sp13_S_contig11993.1699.1 vs. uniprot
Match: A0A6H5JLD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD2_9PHAE)

HSP 1 Score: 692 bits (1786), Expect = 1.280e-247
Identity = 372/407 (91.40%), Postives = 384/407 (94.35%), Query Frame = 0
Query:    1 IDAKSGDYCCTSGVDIRDVTCGTGTGDDEGYPPCFIPADLAEDTCYVEGVEGVSDDGVYCCPLGCGQCGGVGCGAIPVVNIFPDGRELPDNATASSYCCLKAFAKIEVVCGDPGVEPPCMIPEGTSRPPVAAPVDTGDGSXXXXXXXNDTDITDGPDRVVGDGSTPSPSAMETMGCKTISVIVDEQQQFDGIYHMMDGMNETLFLKNDSSAFMSHVPYEGAATNTTSTTMTALNATSECGYWMLAEAMGGNYSLTVQDCATNPDDIDTAMWWMVEDTTEATPEHAVEVMVECVDVPSTPSPASTGSGGPLPDGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXPADDSTGGVKDRSVDPGDAANTEDDAPSSSSNGGLSTGEAVGVGVACSVVAVVGAVGLTRWAKGG 407
            IDAKSGDYCCTSGVD RDVTCGTGTGDDEGYPPCFIP DLAEDTCYVEGVEGVSDDGVYCCPLGCGQCGGVGCGAIPVVNIFPDGRELP++ATASSYCCL+AF +IEVVCGDPGVEPPC+IPEGTSRPP A PVDTGDGS       NDTD+TDGPDRVVG GSTPSPSAMETMGCKTISVIVDEQQQFDGIYHMM GMNETLFLKNDSSAFMSHVPYEGA TNTTSTT TALNATSECGYW+LAEA GGNYSLTVQDCATNPDDIDT +WWMVEDTTEATPE AVEVMVECVD+PSTPSPASTGSGGPLPDGE XXXXXXXXXXXXXXXXXXXXXXXXXXX ADD+TGG++DRSVDPGDA NTEDDAPSSSS GGLSTGEAVGVGVACSVVAVVGAVGLTRWAKGG
Sbjct:  128 IDAKSGDYCCTSGVDSRDVTCGTGTGDDEGYPPCFIPVDLAEDTCYVEGVEGVSDDGVYCCPLGCGQCGGVGCGAIPVVNIFPDGRELPEDATASSYCCLRAFVEIEVVCGDPGVEPPCVIPEGTSRPPAAVPVDTGDGSEGGSGGGNDTDVTDGPDRVVGGGSTPSPSAMETMGCKTISVIVDEQQQFDGIYHMMAGMNETLFLKNDSSAFMSHVPYEGAVTNTTSTTTTALNATSECGYWILAEATGGNYSLTVQDCATNPDDIDTVIWWMVEDTTEATPELAVEVMVECVDMPSTPSPASTGSGGPLPDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADDTTGGIQDRSVDPGDADNTEDDAPSSSSKGGLSTGEAVGVGVACSVVAVVGAVGLTRWAKGG 534          
BLAST of mRNA_Ecto-sp13_S_contig11993.1699.1 vs. uniprot
Match: D8LTF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTF3_ECTSI)

HSP 1 Score: 644 bits (1660), Expect = 2.990e-224
Identity = 365/412 (88.59%), Postives = 370/412 (89.81%), Query Frame = 0
Query:    1 IDAKSGDYCCTSGVDIRDVTCGTGTGDDEGYPPCFIPADLAEDTCYVEGVEGVSDDGVYCCPLGCGQCGGVGCGAIPVVNIFPDGRELPDNATASSYCCLKAFAKIEVVCGDPGVEPPCMIPEGTSRPPVAAPVDTGDGSXXXXXXXNDTDITDGPDRVVGDGSTPSPSAMETMGCKTISVIVDEQQQFDGIYHMMDGMNETLFLKNDSSAFMSHVPYEGAATNTTSTTMTALNATSECGYWMLAEAMGGNYSLTVQDCATNPDDIDTAMWWMVEDTTEATPEHAVEVMVECVDVPSTPSPASTGSGGP----LPDGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXP-ADDSTGGVKDRSVDPGDAANTEDDAPSSSSNGGLSTGEAVGVGVACSVVAVVGAVGLTRWAKGG 407
            IDAKSGDYCCTSGVD RDVTCGTGTGDDEGYPPC IPAD AEDTCYVEGVEGVSDDGVYCCPLGCGQCGG GCGAIPVVNIFPDGRELP++ATASSYCCLKAF  IEVVCGDPGVEPPCMIPEGTSRPPVAAPVDTGDG XXXXXXXNDT ITDGPDRVVG GSTPSPSAMETM CKTISVIVDE QQFDGIYHMM GMNETLFLKNDSSA MSHVPYEGAATNTTSTT TALNATSECGYW+LAEA G N SLTVQDCATNPDDIDTAMWWMVE TTEATPEHAVEVMVECVD+PST               LPDGEE     XXXXXXXXXXXXXXXXXXXXXX  ADDSTGG +DRSVDPGDAANTEDDAPSSSS GGLSTGEAVGVGVACSVVAVVGAVGLTRWAKGG
Sbjct:  409 IDAKSGDYCCTSGVDTRDVTCGTGTGDDEGYPPCLIPADFAEDTCYVEGVEGVSDDGVYCCPLGCGQCGGEGCGAIPVVNIFPDGRELPEDATASSYCCLKAFVDIEVVCGDPGVEPPCMIPEGTSRPPVAAPVDTGDGXXXXXXXXNDTGITDGPDRVVGGGSTPSPSAMETMDCKTISVIVDELQQFDGIYHMMAGMNETLFLKNDSSAIMSHVPYEGAATNTTSTTTTALNATSECGYWILAEATG-NSSLTVQDCATNPDDIDTAMWWMVEGTTEATPEHAVEVMVECVDMPSTXXXXXXXXXXXXXXSLPDGEEGDGVGXXXXXXXXXXXXXXXXXXXXXXXXADDSTGGAQDRSVDPGDAANTEDDAPSSSSKGGLSTGEAVGVGVACSVVAVVGAVGLTRWAKGG 819          
BLAST of mRNA_Ecto-sp13_S_contig11993.1699.1 vs. uniprot
Match: D8LDY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY5_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 1.870e-32
Identity = 62/86 (72.09%), Postives = 66/86 (76.74%), Query Frame = 0
Query:   40 LAEDTCYVEGVEGVSDDGVYCCPLGCGQCGGVGCGAIPVVNIFPDGR-ELPDNATASSYCCLKAFAKIEVVCGDPGVEPPCMIPEG 124
            LAEDTC+VEGVEGVS DGVYCCPLGCGQCGG+GCG+     IF D R ELP  A  SSYCCL AF     VCGD GVEPPC+IPEG
Sbjct:   65 LAEDTCHVEGVEGVSGDGVYCCPLGCGQCGGIGCGSRDESLIFRDPRRELPAGAGTSSYCCLSAFDSSTAVCGDLGVEPPCLIPEG 150          
BLAST of mRNA_Ecto-sp13_S_contig11993.1699.1 vs. uniprot
Match: A0A6H5JC43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC43_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 2.560e-7
Identity = 46/136 (33.82%), Postives = 59/136 (43.38%), Query Frame = 0
Query:    6 GDYCCTSGVDIRDVTCGTGTGDDEGYPPCFI-----PADLAEDTCYVEGVEGVSDDGVYCCPLGCGQCGGVGCGAIPVVNIFPDGRELPDNATASSYCCLKAFAKIEVVCGDPGVEPPCMIPEGTSRPPVAAPVDT 136
            G  CC  GV   D  C     D+    PC I     P+  + +TC   G+EG+  +GV CCPLGCGQCGG GC          DG          S CC  +       C +   + PC+I  G+S  P   P +T
Sbjct:  231 GSSCCGGGVKASDEYC-----DETNEAPCIIGSRPTPSPTSANTCS-NGLEGIDGNGVVCCPLGCGQCGGTGCNTSGAAAGL-DG----------SSCCGGSIKASGKYCDETN-DAPCII--GSSPAPSPTPSET 346          
BLAST of mRNA_Ecto-sp13_S_contig11993.1699.1 vs. uniprot
Match: D7G651_ECTSI (Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G651_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 3.690e-6
Identity = 39/123 (31.71%), Postives = 52/123 (42.28%), Query Frame = 0
Query:    9 CCTSGVDIRDVTCGTGTGDDEGYPPCFI---------PADLAEDT-CYVEGVEGVSDDGVYCCPLGCGQCGGVGCGAIPVVNIFPDGRELPDNATASSYCCLKAFAKIEVVCGDPGVEPPCMI 121
            CC +GV    + C     DD    PC I          ++ A++T    +G EG+  +GV CCP+GCGQC G GCG     N              S  CC      + + C D   E PC+I
Sbjct:  462 CCGNGVKSLGLYC-----DDTNEAPCIIGSRPDTDDVDSESADETQTCSDGTEGIDGNGVVCCPIGCGQCAGDGCGTAGSAN-----------GLGSESCCGNGVKSLGLYCDDTN-EAPCII 567          
BLAST of mRNA_Ecto-sp13_S_contig11993.1699.1 vs. uniprot
Match: A0A6H5JYT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT7_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 1.170e-5
Identity = 43/132 (32.58%), Postives = 49/132 (37.12%), Query Frame = 0
Query:    9 CCTSGVDIRDVTCGTGTGDDEGYPPCFI-PADLAED----------------------TCYVEGVEGVSDDGVYCCPLGCGQCGGVGCGAIPVVNIFPDGRELPDNATASSYCCLKAFAKIEVVCGDPGVEP 117
            CC  G+      C     DD G  PC    A  A+D                      TC  +G+EG+  +GV CCPLGCGQC G GCGA    N              SS CC          C D GV P
Sbjct:  595 CCGGGIKSSGNYC-----DDTGVAPCIYGSAPNADDXXXXXXXXXXXXXXXXXXXDVGTCS-DGIEGIDGNGVVCCPLGCGQCAGSGCGAAGAAN-----------GLTSSSCCGGGIKSSGNYCDDTGVAP 709          
BLAST of mRNA_Ecto-sp13_S_contig11993.1699.1 vs. uniprot
Match: A0A6H5JUS5_9PHAE (MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS5_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 1.960e-5
Identity = 35/97 (36.08%), Postives = 44/97 (45.36%), Query Frame = 0
Query:   27 DDEGYPPCFIPADL--AEDTCYVEGVEGVSDDGVYCCPLGCGQCGGVGCGAIPVVNIFPDGRELPDNATASSYCCLKAFAKIEVVCGDPGVEPPCMI 121
            DDE         D+  A+DT  ++G EG+  +GV CCP+GCGQCGG GC      N              S  CC      + V C D   E PC+I
Sbjct:  553 DDESPXXXXXXGDIESADDT-QIDGTEGIDGNGVVCCPIGCGQCGGDGCSTAGSAN-----------GLGSESCCGGGVKSLGVYCDDTN-EAPCII 636          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11993.1699.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JLD2_9PHAE1.280e-24791.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTF3_ECTSI2.990e-22488.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LDY5_ECTSI1.870e-3272.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JC43_9PHAE2.560e-733.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G651_ECTSI3.690e-631.71Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectoca... [more]
A0A6H5JYT7_9PHAE1.170e-532.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUS5_9PHAE1.960e-536.08MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11993contigEcto-sp13_S_contig11993:1800..5220 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11993.1699.1mRNA_Ecto-sp13_S_contig11993.1699.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11993 1800..5220 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11993.1699.1 ID=prot_Ecto-sp13_S_contig11993.1699.1|Name=mRNA_Ecto-sp13_S_contig11993.1699.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=409bp
IDAKSGDYCCTSGVDIRDVTCGTGTGDDEGYPPCFIPADLAEDTCYVEGV
EGVSDDGVYCCPLGCGQCGGVGCGAIPVVNIFPDGRELPDNATASSYCCL
KAFAKIEVVCGDPGVEPPCMIPEGTSRPPVAAPVDTGDGSGGGSGGGNDT
DITDGPDRVVGDGSTPSPSAMETMGCKTISVIVDEQQQFDGIYHMMDGMN
ETLFLKNDSSAFMSHVPYEGAATNTTSTTMTALNATSECGYWMLAEAMGG
NYSLTVQDCATNPDDIDTAMWWMVEDTTEATPEHAVEVMVECVDVPSTPS
PASTGSGGPLPDGEEGDGVGIRDGDGEGDSNGDGGDASPTPVPADDSTGG
VKDRSVDPGDAANTEDDAPSSSSNGGLSTGEAVGVGVACSVVAVVGAVGL
TRWAKGGA*
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