prot_Ecto-sp13_S_contig11980.1688.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig11980.1688.1
Unique Name	prot_Ecto-sp13_S_contig11980.1688.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	374

Homology

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BLAST of mRNA_Ecto-sp13_S_contig11980.1688.1 vs. uniprot
Match: D7G7U9_ECTSI (E3 ubiquitin protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U9_ECTSI)

HSP 1 Score: 530 bits (1364), Expect = 3.110e-179
Identity = 307/371 (82.75%), Postives = 317/371 (85.44%), Query Frame = 0

Query:    2 PEKSEEAASARERLAGMAGTSNAFYDLDTDGYGLKSRESVKAEAAADIAELDKALKEKARFTGELAGRLFQALQAHLMALPPESRKGTLDKAQLEMVGKKKRLEAERDFLSDELTQARKRCMELSESVTSLRENCRKANRTLDKLAADGVIVEVPSEKGT--LGGRRGSAEGGTAGLGGGAGSTYSVGTGYKRGVNGAGDAEDLLAALEEAQTLAETRCTPM--WLPRCDMNPRRLFLF--DTSLPVVETLCTGPLGYERLSTQLEAEQDMLKLEKARVTELEGQIKQMSGQVEQHEMALQQQMEQQRLRWKSEIVSSNSMLNTAHEDLDKAQGKLKHEQRFGSGMLKSVTIAVSDRGRVTQALRYHESVV 366
            PEKSEEAAS+RERLAGMAGTSNAFYDLDTDGYGLKSRESVKAEAA DIAELDKALKEKARFTGELAGRLFQALQAHLMALPPESRK TLDKAQLEMVGKKKRLEAERDFLSDELTQARKRCMELSESVTSLRENCRKANRTLDKLAADGVIVEVPSEKGT   GGRRGSAEGG A       STYSVGTGYKRGVNGAGD EDLLAALEEAQTLAETR   M  W        R L  F   T L   +   +G   ++RLSTQLEAEQDMLKLEKARVTELEGQIKQMSGQVEQHEMALQQQMEQQRLRWKSEIVSSNSMLNTAHEDLDKAQGKLKHEQRFGSGMLKSVTIA  +  R+ +      S++
Sbjct:  188 PEKSEEAASSRERLAGMAGTSNAFYDLDTDGYGLKSRESVKAEAATDIAELDKALKEKARFTGELAGRLFQALQAHLMALPPESRKDTLDKAQLEMVGKKKRLEAERDFLSDELTQARKRCMELSESVTSLRENCRKANRTLDKLAADGVIVEVPSEKGTSGTGGRRGSAEGGAAXXXXXXXSTYSVGTGYKRGVNGAGDVEDLLAALEEAQTLAETRLKEMERWRTEKTEAERELTQFKASTELETKKADLSGHPQFQRLSTQLEAEQDMLKLEKARVTELEGQIKQMSGQVEQHEMALQQQMEQQRLRWKSEIVSSNSMLNTAHEDLDKAQGKLKHEQRFGSGMLKSVTIAKEEAERLLKQTEQQVSIL 558

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BLAST of mRNA_Ecto-sp13_S_contig11980.1688.1 vs. uniprot
Match: A0A6H5KZC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZC3_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 2.680e-61
Identity = 114/116 (98.28%), Postives = 115/116 (99.14%), Query Frame = 0

Query:    2 PEKSEEAASARERLAGMAGTSNAFYDLDTDGYGLKSRESVKAEAAADIAELDKALKEKARFTGELAGRLFQALQAHLMALPPESRKGTLDKAQLEMVGKKKRLEAERDFLSDELTQ 117
            PEKSEEAASARERLAGMAGTSNAFYDLDTDGYGLKSRESVKAEAAADIAELDKALKEKARFTGELAGRLFQALQAHLMALPPESR+ TLDKAQLEMVGKKKRLEAERDFLSDELTQ
Sbjct:  215 PEKSEEAASARERLAGMAGTSNAFYDLDTDGYGLKSRESVKAEAAADIAELDKALKEKARFTGELAGRLFQALQAHLMALPPESRRDTLDKAQLEMVGKKKRLEAERDFLSDELTQ 330

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig11980.1688.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig11980.1688.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G7U9_ECTSI	3.110e-179	82.75	E3 ubiquitin protein ligase n=1 Tax=Ectocarpus sil...	[more]
A0A6H5KZC3_9PHAE	2.680e-61	98.28	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 253..301
None	No IPR available	COILS	Coil	Coil	coord: 101..149

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig11980	contig	Ecto-sp13_S_contig11980:196..4668 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig11980.1688.1	mRNA_Ecto-sp13_S_contig11980.1688.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig11980 196..4668 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig11980.1688.1 ID=prot_Ecto-sp13_S_contig11980.1688.1|Name=mRNA_Ecto-sp13_S_contig11980.1688.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=374bp
QPEKSEEAASARERLAGMAGTSNAFYDLDTDGYGLKSRESVKAEAAADIA
ELDKALKEKARFTGELAGRLFQALQAHLMALPPESRKGTLDKAQLEMVGK
KKRLEAERDFLSDELTQARKRCMELSESVTSLRENCRKANRTLDKLAADG
VIVEVPSEKGTLGGRRGSAEGGTAGLGGGAGSTYSVGTGYKRGVNGAGDA
EDLLAALEEAQTLAETRCTPMWLPRCDMNPRRLFLFDTSLPVVETLCTGP
LGYERLSTQLEAEQDMLKLEKARVTELEGQIKQMSGQVEQHEMALQQQME
QQRLRWKSEIVSSNSMLNTAHEDLDKAQGKLKHEQRFGSGMLKSVTIAVS
DRGRVTQALRYHESVVWCHMRYR*