prot_Ecto-sp13_S_contig11902.1623.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11902.1623.1
Unique Nameprot_Ecto-sp13_S_contig11902.1623.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length269
Homology
BLAST of mRNA_Ecto-sp13_S_contig11902.1623.1 vs. uniprot
Match: D8LCT3_ECTSI (Glycine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCT3_ECTSI)

HSP 1 Score: 426 bits (1095), Expect = 7.780e-147
Identity = 262/269 (97.40%), Postives = 265/269 (98.51%), Query Frame = 0
Query:    1 AGRATLARSNPLARTGSGSSASQQFHRTHRTAQRVAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEPGCSMDELVGLCKRRGFVFPSSEIYNGFSGFFDYGPLGVELKKNIKDAWWRDVVQARDDIVGVDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVELEDGEVIGYVSVLESGTMQEEADAAANKMKRKAAKQGTLKAMSLQDLSRISAEELELVPSPATGTPGALTPPREFNLMFQTNV 269
            AGRATLARSNPLARTGSGSSASQQF RTHRTAQRVA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEPGCSMDELVGLCKRRGFVFPSSEIYNGF+GFFDYGPLGVELKKNIKDAWWRDVVQARDDIVGVDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVELEDGEVIGYVSVLESGTMQEEAD AANK+KRKAAKQGTLKA+SLQDLSRISAEELELVPSPATGTPGALTPPREFNLMFQTNV
Sbjct:   33 AGRATLARSNPLARTGSGSSASQQFRRTHRTAQRVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEPGCSMDELVGLCKRRGFVFPSSEIYNGFAGFFDYGPLGVELKKNIKDAWWRDVVQARDDIVGVDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVELEDGEVIGYVSVLESGTMQEEADTAANKIKRKAAKQGTLKAVSLQDLSRISAEELELVPSPATGTPGALTPPREFNLMFQTNV 301          
BLAST of mRNA_Ecto-sp13_S_contig11902.1623.1 vs. uniprot
Match: A0A6U2HYH8_HEMAN (Glycine--tRNA ligase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2HYH8_HEMAN)

HSP 1 Score: 298 bits (764), Expect = 1.790e-94
Identity = 142/188 (75.53%), Postives = 167/188 (88.83%), Query Frame = 0
Query:   82 SMDELVGLCKRRGFVFPSSEIYNGFSGFFDYGPLGVELKKNIKDAWWRDVVQARDDIVGVDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVELEDGEVIGYVSVLESGTMQEEADAAANKMKRKAAKQGTLKAMSLQDLSRISAEELELVPSPATGTPGALTPPREFNLMFQTNV 269
            SM+++VG+CKRRGFVF SSEIYNGF+GF+DYGPLGVELK NIK  WWRD+V  RDD+VG+DSSII++P++W++SGHV GFSDPMVDCKESK+RYRADQLFYGKVELEDGEV+GYVSV+ESGTMQEEAD  AN MKRKA KQGTLK ++L +++    +ELE VPSPATG PG+LTPPR FNLMFQT V
Sbjct:   98 SMEDIVGVCKRRGFVFQSSEIYNGFAGFYDYGPLGVELKANIKRVWWRDMVHRRDDMVGLDSSIIASPQIWQSSGHVDGFSDPMVDCKESKMRYRADQLFYGKVELEDGEVLGYVSVMESGTMQEEADKTANTMKRKAQKQGTLKPVTLAEVAECPLDELENVPSPATGKPGSLTPPRAFNLMFQTQV 285          
BLAST of mRNA_Ecto-sp13_S_contig11902.1623.1 vs. uniprot
Match: A0A835YRJ7_9STRA (Glycine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRJ7_9STRA)

HSP 1 Score: 291 bits (744), Expect = 1.890e-92
Identity = 142/188 (75.53%), Postives = 166/188 (88.30%), Query Frame = 0
Query:   83 MDELVGLCKRRGFVFPSSEIYNGFSGFFDYGPLGVELKKNIKDAWWRDVVQARDDIVGVDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVEL-EDGEVIGYVSVLESGTMQEEADAAANKMKRKAAKQGTLKAMSLQDLSRISAEELELVPSPATGTPGALTPPREFNLMFQTNV 269
            M+ELV LCKRRGFVF SSEIYNGF+GFFDYGPLGVE+KKNIKD WWRDVV+ RDDIVG+DSSII +PK+WEASGHVAGFSDPMVDC+ESKLRYRADQ+F+ +V L E GEV+G VSV+ESGTM+ EA AAA+KMKRKAAKQG L  + L+DL++ +AE+L ++PSPATG PG LT PR+FNLMFQT V
Sbjct:    1 MEELVALCKRRGFVFQSSEIYNGFAGFFDYGPLGVEIKKNIKDLWWRDVVRRRDDIVGLDSSIIGSPKIWEASGHVAGFSDPMVDCRESKLRYRADQVFWARVALAETGEVLGAVSVMESGTMEAEAQAAADKMKRKAAKQGALAPLDLKDLTQATAEDLSIIPSPATGNPGTLTAPRDFNLMFQTAV 188          
BLAST of mRNA_Ecto-sp13_S_contig11902.1623.1 vs. uniprot
Match: A0A7R9YDS6_9STRA (Glycine--tRNA ligase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDS6_9STRA)

HSP 1 Score: 283 bits (723), Expect = 6.490e-89
Identity = 139/188 (73.94%), Postives = 162/188 (86.17%), Query Frame = 0
Query:   83 MDELVGLCKRRGFVFPSSEIYNGFSGFFDYGPLGVELKKNIKDAWWRDVVQARDDIVGVDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVELEDGEVIGYVSVLESGTMQEEADAAANKMKRKAAKQGTLKA-MSLQDLSRISAEELELVPSPATGTPGALTPPREFNLMFQTNV 269
            M+++V LCKRRGFVF SSEIYNGF+GF+DYGPLGVELKKNIK+AWWR VV ARDD+VG+DSSII +PKVWEASGHVAGFSDPMVDCKESK+RYRADQLF+GKVE +DGE +GYVSV+E   MQ EA+  A KM RK+A+ G LK  + L+DL+  + EE+ELVPSPATG PG+LTPPR FNLMFQT V
Sbjct:   37 MEDVVSLCKRRGFVFQSSEIYNGFNGFYDYGPLGVELKKNIKEAWWRAVVYARDDVVGIDSSIIMSPKVWEASGHVAGFSDPMVDCKESKMRYRADQLFFGKVETQDGETLGYVSVMEDAAMQAEAEKKAEKM-RKSAQAGALKLPIELKDLTEATPEEIELVPSPATGKPGSLTPPRAFNLMFQTQV 223          
BLAST of mRNA_Ecto-sp13_S_contig11902.1623.1 vs. uniprot
Match: A0A6U1N9R4_9STRA (Glycine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1N9R4_9STRA)

HSP 1 Score: 278 bits (712), Expect = 8.420e-88
Identity = 133/188 (70.74%), Postives = 162/188 (86.17%), Query Frame = 0
Query:   83 MDELVGLCKRRGFVFPSSEIYNGFSGFFDYGPLGVELKKNIKDAWWRDVVQARDDIVGVDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVELE-DGEVIGYVSVLESGTMQEEADAAANKMKRKAAKQGTLKAMSLQDLSRISAEELELVPSPATGTPGALTPPREFNLMFQTNV 269
            MDE+V LCKRRG +F SSEIYNGF GF+D+GPLGVEL+ NIK AWW+D+V  R+DIVG+DSSII++P +W+ASGHV GFSDPMVDCKESK RYRADQLF+ KVE+E DGEV+GY+S+LESG MQ++A+  A KMK+KA KQGTLK + L++++  + EEL L+PSPATGTPGALT PREFNLMFQT V
Sbjct:    1 MDEIVALCKRRGIIFQSSEIYNGFQGFYDFGPLGVELRNNIKQAWWKDMVHGREDIVGLDSSIIASPAIWKASGHVDGFSDPMVDCKESKNRYRADQLFFAKVEVEEDGEVLGYLSLLESGDMQDQAEKQAKKMKKKAEKQGTLKPIELKEVAEATEEELALIPSPATGTPGALTAPREFNLMFQTQV 188          
BLAST of mRNA_Ecto-sp13_S_contig11902.1623.1 vs. uniprot
Match: A0A1Z9IHR3_9BACT (Glycine--tRNA ligase n=1 Tax=Opitutales bacterium TMED158 TaxID=1986794 RepID=A0A1Z9IHR3_9BACT)

HSP 1 Score: 273 bits (699), Expect = 9.070e-86
Identity = 132/187 (70.59%), Postives = 153/187 (81.82%), Query Frame = 0
Query:   83 MDELVGLCKRRGFVFPSSEIYNGFSGFFDYGPLGVELKKNIKDAWWRDVVQARDDIVGVDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVELEDGEVIGYVSVLESGTMQEEADAAANKMKRKAAKQGTLKAMSLQDLSRISAEELELVPSPATGTPGALTPPREFNLMFQTNV 269
            MD +V LCKRRGF+F SSEIY G++GFFDYGPLG ELKKNIKDAWW+D+VQ RDDI G+DSSII +PK+W ASGHV GFSDPMVDCK SK+RYRADQLFY  V + DG +IGYVSVLE G+MQ EA+ AANKMKRK  +QG L  + L+D +     E EL+PSPATG PG+LTPPREFNLMF+T V
Sbjct:   12 MDAIVALCKRRGFIFQSSEIYGGYNGFFDYGPLGSELKKNIKDAWWKDMVQRRDDIEGLDSSIIMSPKIWVASGHVGGFSDPMVDCKVSKMRYRADQLFYAPVTV-DGSIIGYVSVLEDGSMQTEAETAANKMKRKGGRQGELGPIELKDYTEADPSEYELIPSPATGEPGSLTPPREFNLMFETKV 197          
BLAST of mRNA_Ecto-sp13_S_contig11902.1623.1 vs. uniprot
Match: A0A1J4XFE5_9BACT (Glycine--tRNA ligase n=1 Tax=Verrucomicrobia bacterium CG1_02_43_26 TaxID=1805421 RepID=A0A1J4XFE5_9BACT)

HSP 1 Score: 270 bits (689), Expect = 2.930e-84
Identity = 129/188 (68.62%), Postives = 160/188 (85.11%), Query Frame = 0
Query:   82 SMDELVGLCKRRGFVFPSSEIYNGFSGFFDYGPLGVELKKNIKDAWWRDVVQARDDIVGVDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVELEDGEVIGYVSVLESGTMQEEADAAANKMKRKAAKQGTLKAMSLQDLSRISAEELELVPSPATGTPGALTPPREFNLMFQTNV 269
            +MD +V LCKRRGF+F SSEIY G +GFFDYGP+G E+++NIK+AWW+D++Q RDD+VG+DSSII +  VW+ASGH+ GFSDPMVDCKESKLRYRADQLF+  V ++D +VIGYVSVLESGTMQEEAD AA  +KRK AKQG+LKA++L+  +    EE ELVPSPATG PG+LT PR+FNLMF+T+V
Sbjct:   10 TMDNIVALCKRRGFIFHSSEIYGGINGFFDYGPMGSEMRRNIKNAWWQDMIQERDDMVGLDSSIIMHSNVWKASGHIEGFSDPMVDCKESKLRYRADQLFFAPVSVDD-DVIGYVSVLESGTMQEEADKAAEALKRKLAKQGSLKAVALKPFTEAKPEEYELVPSPATGKPGSLTAPRDFNLMFETSV 196          
BLAST of mRNA_Ecto-sp13_S_contig11902.1623.1 vs. uniprot
Match: A0A2D8RLT6_9BACT (Glycine--tRNA ligase n=2 Tax=Opitutae TaxID=414999 RepID=A0A2D8RLT6_9BACT)

HSP 1 Score: 267 bits (683), Expect = 2.260e-83
Identity = 128/187 (68.45%), Postives = 153/187 (81.82%), Query Frame = 0
Query:   83 MDELVGLCKRRGFVFPSSEIYNGFSGFFDYGPLGVELKKNIKDAWWRDVVQARDDIVGVDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVELEDGEVIGYVSVLESGTMQEEADAAANKMKRKAAKQGTLKAMSLQDLSRISAEELELVPSPATGTPGALTPPREFNLMFQTNV 269
            MD +VGLCKRRGF+F SSEIY G++GFFD+GPLGVELKKN+KDAWW D+V  RDDI G+DSSII +PK+WEASGHV GFSDPMVDCK SK+RYRADQLFY  V + DG  IGYVSVLE  +M+ +A AAA K+KRK   QG L A+SL++ +   A E +L+PSPATG PG+LTPPR+FNLMF+T V
Sbjct:   12 MDAIVGLCKRRGFIFQSSEIYGGYNGFFDFGPLGVELKKNLKDAWWEDMVHRRDDIEGLDSSIIMSPKIWEASGHVGGFSDPMVDCKASKMRYRADQLFYSPV-IVDGNTIGYVSVLEDHSMESDAQAAAEKLKRKNGVQGELAALSLKEYTEADASEYDLIPSPATGEPGSLTPPRDFNLMFETKV 197          
BLAST of mRNA_Ecto-sp13_S_contig11902.1623.1 vs. uniprot
Match: A0A7X1E6A8_9BACT (Glycine--tRNA ligase n=1 Tax=Puniceicoccus vermicola TaxID=388746 RepID=A0A7X1E6A8_9BACT)

HSP 1 Score: 267 bits (682), Expect = 3.640e-83
Identity = 128/188 (68.09%), Postives = 154/188 (81.91%), Query Frame = 0
Query:   82 SMDELVGLCKRRGFVFPSSEIYNGFSGFFDYGPLGVELKKNIKDAWWRDVVQARDDIVGVDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVELEDGEVIGYVSVLESGTMQEEADAAANKMKRKAAKQGTLKAMSLQDLSRISAEELELVPSPATGTPGALTPPREFNLMFQTNV 269
            +MDE++GLC+RRGFVF SSEIY G +GFFDYGPLGVEL+KNIKDAWW+D+V  RDD+VGVD SII +PKVW+ASGHV GFSDPMVDCKESK+RYRADQLF+  V +E GE IGYVSV+E  +M++EA+  A +MKRK  KQG L  + L+        E EL+PSPATG PG+LTPPR+FNLMF+TNV
Sbjct:   13 TMDEVIGLCRRRGFVFQSSEIYGGINGFFDYGPLGVELRKNIKDAWWQDMVHRRDDVVGVDCSIIMHPKVWQASGHVDGFSDPMVDCKESKMRYRADQLFFAPVIVE-GETIGYVSVMEDASMEDEANKKAAEMKRKLGKQGELSPVELKSYDEADPSEYELIPSPATGKPGSLTPPRDFNLMFETNV 199          
BLAST of mRNA_Ecto-sp13_S_contig11902.1623.1 vs. uniprot
Match: A0A3D4HGA1_9BACT (Glycine--tRNA ligase (Fragment) n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A3D4HGA1_9BACT)

HSP 1 Score: 256 bits (655), Expect = 5.250e-83
Identity = 122/187 (65.24%), Postives = 148/187 (79.14%), Query Frame = 0
Query:   83 MDELVGLCKRRGFVFPSSEIYNGFSGFFDYGPLGVELKKNIKDAWWRDVVQARDDIVGVDSSIISNPKVWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVELEDGEVIGYVSVLESGTMQEEADAAANKMKRKAAKQGTLKAMSLQDLSRISAEELELVPSPATGTPGALTPPREFNLMFQTNV 269
            MD +V LCKRRGF+FPSSEIY G +GFFDYGPLGVEL+KNIKDAWWRD+V  RDD+VG+D+SII NP+ W++SGH+ GF+DPMVDCKESKLRYRAD L+Y  V + DGE IGYVS L+S T+ E+  A A K+KRK A QGTL+ + L+  +     E E +PSP TG PG+LTPPR FNLMF+T V
Sbjct:   11 MDTIVALCKRRGFIFPSSEIYGGINGFFDYGPLGVELRKNIKDAWWRDMVHRRDDVVGLDASIIMNPETWKSSGHIEGFTDPMVDCKESKLRYRADHLYYAPVVV-DGETIGYVSALQSETLDEDTQAQAEKLKRKLAIQGTLEPLKLKPYTAADPSEYEKIPSPETGKPGSLTPPRNFNLMFKTYV 196          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11902.1623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCT3_ECTSI7.780e-14797.40Glycine--tRNA ligase n=1 Tax=Ectocarpus siliculosu... [more]
A0A6U2HYH8_HEMAN1.790e-9475.53Glycine--tRNA ligase n=2 Tax=Hemiselmis andersenii... [more]
A0A835YRJ7_9STRA1.890e-9275.53Glycine--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
A0A7R9YDS6_9STRA6.490e-8973.94Glycine--tRNA ligase n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6U1N9R4_9STRA8.420e-8870.74Glycine--tRNA ligase n=1 Tax=Fibrocapsa japonica T... [more]
A0A1Z9IHR3_9BACT9.070e-8670.59Glycine--tRNA ligase n=1 Tax=Opitutales bacterium ... [more]
A0A1J4XFE5_9BACT2.930e-8468.62Glycine--tRNA ligase n=1 Tax=Verrucomicrobia bacte... [more]
A0A2D8RLT6_9BACT2.260e-8368.45Glycine--tRNA ligase n=2 Tax=Opitutae TaxID=414999... [more]
A0A7X1E6A8_9BACT3.640e-8368.09Glycine--tRNA ligase n=1 Tax=Puniceicoccus vermico... [more]
A0A3D4HGA1_9BACT5.250e-8365.24Glycine--tRNA ligase (Fragment) n=1 Tax=Opitutae b... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002315Glycyl-tRNA synthetasePRINTSPR01043TRNASYNTHGLYcoord: 259..269
score: 49.15
coord: 102..116
score: 64.07
NoneNo IPR availableGENE3D3.30.930.10coord: 80..224
e-value: 1.2E-36
score: 128.3
NoneNo IPR availablePANTHERPTHR10745:SF19coord: 82..268
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 82..268
IPR027031Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2PANTHERPTHR10745GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2coord: 82..268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11902contigEcto-sp13_S_contig11902:1240..5248 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11902.1623.1mRNA_Ecto-sp13_S_contig11902.1623.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11902 1240..5248 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11902.1623.1 ID=prot_Ecto-sp13_S_contig11902.1623.1|Name=mRNA_Ecto-sp13_S_contig11902.1623.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=269bp
AGRATLARSNPLARTGSGSSASQQFHRTHRTAQRVAATTSTRRSMVASSA
AGADTAGKGGAVDEEEGGGAAGGGAGGEPGCSMDELVGLCKRRGFVFPSS
EIYNGFSGFFDYGPLGVELKKNIKDAWWRDVVQARDDIVGVDSSIISNPK
VWEASGHVAGFSDPMVDCKESKLRYRADQLFYGKVELEDGEVIGYVSVLE
SGTMQEEADAAANKMKRKAAKQGTLKAMSLQDLSRISAEELELVPSPATG
TPGALTPPREFNLMFQTNV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002315tRNA-synt_gly
IPR027031Gly-tRNA_synthase/POLG2