prot_Ecto-sp13_S_contig119.1618.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig119.1618.1
Unique Nameprot_Ecto-sp13_S_contig119.1618.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1062
Homology
BLAST of mRNA_Ecto-sp13_S_contig119.1618.1 vs. uniprot
Match: A0A6H5JNQ0_9PHAE (KIX_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNQ0_9PHAE)

HSP 1 Score: 1185 bits (3065), Expect = 0.000e+0
Identity = 863/1186 (72.77%), Postives = 872/1186 (73.52%), Query Frame = 0
Query:    1 MGFPRQNSIGSSTGMVGVSAGMVMSTGHAGGGGVG---GGSGTLTGQHEAALKEERAKQHRSRRAEELRNIYQEDIHYFVQHGSSLLKKLHKTRPASQNSEQVLKLVQYVKEGHNALLYINRCHDTGHVPSAASLQSLEHTLIRVHKASNALQVMIRDHSKTQYGXXXXXXXXXXXXXXXXXXXXXQQPSRQYSADQNAFSPGQSNSTLGPLVSTTGGVGTPVSSVGPTLAGSIDGGDSAALSLDPIPLPDTGTGYRTPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAHERQQVETARXXXXXXXXXXXXXXXXXXLQHQQXQQXLRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAQTXXNXXXXXXQQNAASASSGALPDARLSLMQGESSNDMFWGSVDIGDLEPTPLSGSLEDQVIPPNLEEGGDFDMPVEDFLDLDPFPLEGMPLDGDDWLSTQSLPEGSGNKPGGSPRAGNVSMDSSAVGGSGGASTRPGAYVPTSGALGASGAGGLAVSSGLQRQQQ-GLPQLQTQLSVGGLNPLGNGASGVAPVNPADPISED-------------------------------------------------------------------------------------------------------------------------NPALLQNVINHQLGPMPRLLNGLVSGCTVVVPAPSVAAVPPAGSGSRGSGTTHDXXXXXXXXXXXAQPALSNKRTKDECGDGGDGRPEKKIALGGSGGRDRSRSSSPTMSPSMAXXXXXXXXXXXXXXXXXLLGXXXXXXXXXXXXXXXXXXXXNLLARPASADFRHGGGEELMALLKAKVGRLFSLSAEYTHVRTGVVPENGSPAARGGGEVGKKQEDGLTNXXXXXXXXXXXXXGTTTAGDVKSDVGGGGLRRVLARVKAVRAGHFVVHIMFDVAGSNECRPCDVSVLSWNEAQEGESAFAGGADARVKVEGGGNSGGGFMDTVHGSKPWRTSQHTAFIRVSGHAFQALHGFVNKRTDGNVGEALASFLTWMANYDRVFQDPCTIANKLVATDSCTGEPLPPTLRTSDGSALLAESLAGTPQRKPQSPASSQTVSAAAAGTGVATAEA 1061
            MGFPRQNSIGSSTGMVGVSAGMVMSTGH GGGGVG   GGSGT TGQHEAALKEERAKQHRSRRAEELR IYQEDIHYFVQHGSSLLKKLHKTRPASQNSEQVLKLVQYVKEGHNALLYINRCH+TGHVPSAASLQSLEHTLIRVHKASNALQVMIRDHSKTQYG   XXXXXXXXXXXXXX    QQPSRQYSADQNAFSPGQSNSTLGPL  T GGV TPV SVGPTL GSIDGGDSAALSLD IPLPDTGTGYRTPQ XXXXXX                                                    +QQV TAR                  LQ   X  X   XXXXXXXXXXXXXXX      XX   XXXXXXXXXXXXXXXXXXXXXXX       XX XXXXXX    ASASSGALPDARL L QGESSNDMFWGSVDIGDLEPTPLSG LEDQVIPPNLEEGGDFDMPVEDFLDLDPFPLEGMPLDGDDWLSTQ LPEGSGNKPGGSPRAGN SMDSSAVGG GGASTRPGAYVP  GALG SGAGGLAVSSGLQ+QQQ GLPQLQTQLSVGGL PLGNGASGVAP+NPADPI E                                                                                                                          NPALL NVINHQLGPMPRLLNGLVSGCTVVVPAPSVAAVPPA SGSRGSG   D   XXXXXXXX   ALSNKRTKDECGDG DGRPEKKIALG                    XXXXXXXXXXXXXXXXX   XXXXXXXXXXXXXXXXXXXXNLLARPASADFRHGGGEELMALL+AKVGRLFSLSAEYTHVRTG +  NGS AA GG EVGKKQEDGLT XXXXXXXXXXXXX   TAGDVK DVGGGGLRRVL+RVKAVRAGHFVVHI FDVAGSNECRPCDVSVLSWNEAQEGESA AGGADARVKVEGG     GFMDTVHGSKPWR SQHTAF+RVSGHAFQALHGFVNKRTDGNVGEALASFLTWMANYDRVFQDPCTIANKLVATDS TGEPLPPTLRTSDGSALLAESLAGTPQR+PQSPASSQT S AA GTGVAT EA
Sbjct:  262 MGFPRQNSIGSSTGMVGVSAGMVMSTGHTGGGGVGAVGGGSGTSTGQHEAALKEERAKQHRSRRAEELRTIYQEDIHYFVQHGSSLLKKLHKTRPASQNSEQVLKLVQYVKEGHNALLYINRCHETGHVPSAASLQSLEHTLIRVHKASNALQVMIRDHSKTQYGGCGXXXXXXXXXXXXXX----QQPSRQYSADQNAFSPGQSNSTLGPLGGTAGGVVTPVCSVGPTLTGSIDGGDSAALSLDAIPLPDTGTGYRTPQQXXXXXXNFLR----------------------------------------------QTQQQVGTARRQRAHQLQ----------LQXXXXXXXXXXXXXXXXXXXXXXXXXLQQQQLXXQQNXXXXXXXXXXXXXXXXXXXXXXXMPFRQXXXXXXXXXXXXXXXASASSGALPDARLLLAQGESSNDMFWGSVDIGDLEPTPLSGPLEDQVIPPNLEEGGDFDMPVEDFLDLDPFPLEGMPLDGDDWLSTQCLPEGSGNKPGGSPRAGNNSMDSSAVGGCGGASTRPGAYVPPPGALGDSGAGGLAVSSGLQQQQQQGLPQLQTQLSVGGLTPLGNGASGVAPINPADPIPEPLPQTVVDRLAAVVAGGGTAASNLGRLAGSVSAQLGFRAPGSTAAAADSSRSYLGGAAQDPDLLAAEASLGMGQSGRASGXXXXXXCGALTASGLRSAGQTLCRQANSAFEAMATAADVNKGNPALLHNVINHQLGPMPRLLNGLVSGCTVVVPAPSVAAVPPARSGSRGSGAAQDGTAXXXXXXXXXXXALSNKRTKDECGDGDDGRPEKKIALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLLARPASADFRHGGGEELMALLRAKVGRLFSLSAEYTHVRTGGMSGNGSSAALGG-EVGKKQEDGLTXXXXXXXXXXXXXX--XTAGDVKPDVGGGGLRRVLSRVKAVRAGHFVVHINFDVAGSNECRPCDVSVLSWNEAQEGESASAGGADARVKVEGG-----GFMDTVHGSKPWRASQHTAFVRVSGHAFQALHGFVNKRTDGNVGEALASFLTWMANYDRVFQDPCTIANKLVATDSGTGEPLPPTLRTSDGSALLAESLAGTPQREPQSPASSQTASTAA-GTGVATVEA 1378          
BLAST of mRNA_Ecto-sp13_S_contig119.1618.1 vs. uniprot
Match: D7FX92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX92_ECTSI)

HSP 1 Score: 851 bits (2199), Expect = 1.640e-298
Identity = 538/626 (85.94%), Postives = 544/626 (86.90%), Query Frame = 0
Query:  439 MQGESSNDMFWGSVDIGDLEPTPLSGSLEDQVIPPNLEEGGDFDMPVEDFLDLDPFPLEGMPLDGDDWLSTQSLPEGSGNKPGGSPRAGNVSMDSSAVGGSGGASTRPGAYVPTSGALGASGAGGLAVSSGLQRQQQ-GLPQLQTQLSVGGLNPLGNGASGVAPVNPADPISEDNPALLQNVINHQLGPMPRLLNGLVSGCTVVVPAPSVAAVPPAGSGSRGSGTTHDXXXXXXXXXXXAQPALSNKRTKDECGDGGDGRPEKKIALGGSGGRDRSRSSSPTMSPSMAXXXXXXXXXXXXXXXXXLLGXXXXXXXXXXXXXXXXXXXXNLLARPASADFRHGGGEELMALLKAKVGRLFSLSAEYTHVRTGVVPENGSPAARGGGEVGKKQEDGLTNXXXXXXXXXXXXXGTTT-AGDVKSDVGGGGLRRVLARVKAVRAGHFVVHIMFDVAGSNECRPCDVSVLSWNEAQEGESAFAGGADARVKVEGGGNSGGGFMDTVHGSKPWRTSQHTAFIRVSGHAFQALHGFVNKRTDGNVGEALASFLTWMANYDRVFQDPCTIANKLVATDSCTGEPLPPTLRTSDGSALLAESLAGTPQRKPQSPASSQTVSAAAA-GTGVATAEA 1061
            MQGESSNDMFWGSVDIGDLEPTPLSGSLEDQVIPPNLEEGGDFDMPVEDFLDLDPFPLEGMPL+GDDWLSTQSLPEGSGNKPGGSPRAGNVSMDSSAVGGSGGASTRPGAYVP  GALGASGAGGLAVSSGLQ+QQQ GLPQLQTQLSVGGL PLGNGASGVAP+NPADPI E NPALLQNVINHQLGPMPRLLNGLVSGCTVVVPAPSVAAVP              XXXXXXXXXXX      NKRTKDECGDG DGRP                           XXXXXXXXXXXXXXXXX   XXXXXXXXXXXXXXXXXXXXNLLARPASADFRHGGGEELMA LKAKVGRLFSLSAEYTHVRTGVVPENGSPAA GGGEVGKKQE GLTNXXXXXXXXXXXXX     AGDVKSDVGGGGLRRVLARVKAVRAGHFVVHI FDVAGSNECRPCDVSVLSWNEAQEGESA  GGADARVKVEGGG SGGGFMDTVHGSKPWRTSQHTAF+RVSGHAFQALHG+VNKRTDGNVGEAL SFLTWMANYDRVFQDPCTIANKLVATDS TGEPLPPTLRT DGSALLAESLAGTPQR+PQSPAS          GTGVATAEA
Sbjct:    1 MQGESSNDMFWGSVDIGDLEPTPLSGSLEDQVIPPNLEEGGDFDMPVEDFLDLDPFPLEGMPLEGDDWLSTQSLPEGSGNKPGGSPRAGNVSMDSSAVGGSGGASTRPGAYVPPPGALGASGAGGLAVSSGLQQQQQQGLPQLQTQLSVGGLTPLGNGASGVAPINPADPIPEGNPALLQNVINHQLGPMPRLLNGLVSGCTVVVPAPSVAAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKRTKDECGDGDDGRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLLARPASADFRHGGGEELMARLKAKVGRLFSLSAEYTHVRTGVVPENGSPAALGGGEVGKKQEAGLTNXXXXXXXXXXXXXXXXXXAGDVKSDVGGGGLRRVLARVKAVRAGHFVVHIKFDVAGSNECRPCDVSVLSWNEAQEGESASTGGADARVKVEGGGQSGGGFMDTVHGSKPWRTSQHTAFVRVSGHAFQALHGYVNKRTDGNVGEALVSFLTWMANYDRVFQDPCTIANKLVATDSGTGEPLPPTLRTPDGSALLAESLAGTPQREPQSPASXXXXXXXXXXGTGVATAEA 626          
BLAST of mRNA_Ecto-sp13_S_contig119.1618.1 vs. uniprot
Match: A0A835Z449_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z449_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.340e-14
Identity = 52/98 (53.06%), Postives = 64/98 (65.31%), Query Frame = 0
Query:   62 AEELRNIYQEDIHYFVQHGSSLLKKLHKTRPASQ------NSEQVLKLVQYVKEGHNALLYINRCHDTGHVPSAASLQSLEHTLIRVHKASNALQVMI 153
            AE+LR  Y+ DI  FVQ G S+L K H   P S        ++Q+ KL QYV+EG NAL+Y+ RCH  GHVPSA SLQSLE TL +VH AS  L+ M+
Sbjct:  447 AEQLRRRYEADIRAFVQQGRSVLLK-HDGSPRSMAAHGSGGADQIRKLRQYVREGQNALVYMERCHSRGHVPSAVSLQSLEQTLAKVHCASRTLRQMM 543          
BLAST of mRNA_Ecto-sp13_S_contig119.1618.1 vs. uniprot
Match: A0A836CHY1_9STRA (KIX_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHY1_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 5.710e-7
Identity = 32/54 (59.26%), Postives = 41/54 (75.93%), Query Frame = 0
Query:   99 QVLKLVQYVKEGHNALLYINRCHDTGHVPSAASLQSLEHTLIRVHKASNALQVM 152
            +V KLVQY++EG NAL+Y+ RCH   H+PS  SL+SL  TL +VHKAS AL+ M
Sbjct:   70 RVRKLVQYIREGQNALMYMERCHLQHHIPSGPSLESLHLTLQKVHKASLALRSM 123          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig119.1618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JNQ0_9PHAE0.000e+072.77KIX_2 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FX92_ECTSI1.640e-29885.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z449_9STRA1.340e-1453.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CHY1_9STRA5.710e-759.26KIX_2 domain-containing protein n=1 Tax=Tribonema ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 331..379
NoneNo IPR availableCOILSCoilCoilcoord: 281..326
NoneNo IPR availableCOILSCoilCoilcoord: 400..421
IPR021627Mediator complex, subunit Med27PFAMPF11571Med27coord: 941..1021
e-value: 1.5E-10
score: 41.3
IPR039332Protein FAM186A/FAM186BPANTHERPTHR33590FAMILY NOT NAMEDcoord: 254..575

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig119contigEcto-sp13_S_contig119:27425..33006 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig119.1618.1mRNA_Ecto-sp13_S_contig119.1618.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig119 27191..34110 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig119.1618.1 ID=prot_Ecto-sp13_S_contig119.1618.1|Name=mRNA_Ecto-sp13_S_contig119.1618.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1062bp
MGFPRQNSIGSSTGMVGVSAGMVMSTGHAGGGGVGGGSGTLTGQHEAALK
EERAKQHRSRRAEELRNIYQEDIHYFVQHGSSLLKKLHKTRPASQNSEQV
LKLVQYVKEGHNALLYINRCHDTGHVPSAASLQSLEHTLIRVHKASNALQ
VMIRDHSKTQYGGGGGGGGGGGGGGGGGGGMPPQQPSRQYSADQNAFSPG
QSNSTLGPLVSTTGGVGTPVSSVGPTLAGSIDGGDSAALSLDPIPLPDTG
TGYRTPQQQQQQQNFLRQTQQQRQRRAMQQHQLLQQQQAQQQQQQQQLQL
QQQQLQQQQQQKAAHERQQVETARRQRAHQLQLQQQQLHNQQLQHQQHQQ
QLRQQQHHLQQQQLQHQQQQQQQQQQQNQPQQQQTQPQVQQQTQQQQMPF
RQKQQQLAQTQQNQQQQQQQQNAASASSGALPDARLSLMQGESSNDMFWG
SVDIGDLEPTPLSGSLEDQVIPPNLEEGGDFDMPVEDFLDLDPFPLEGMP
LDGDDWLSTQSLPEGSGNKPGGSPRAGNVSMDSSAVGGSGGASTRPGAYV
PTSGALGASGAGGLAVSSGLQRQQQGLPQLQTQLSVGGLNPLGNGASGVA
PVNPADPISEDNPALLQNVINHQLGPMPRLLNGLVSGCTVVVPAPSVAAV
PPAGSGSRGSGTTHDGTTAAAAAAGAAQPALSNKRTKDECGDGGDGRPEK
KIALGGSGGRDRSRSSSPTMSPSMAAAAAAAAAAATSASNDALLGSENGG
GASSSPATAAPPASSNLLARPASADFRHGGGEELMALLKAKVGRLFSLSA
EYTHVRTGVVPENGSPAARGGGEVGKKQEDGLTNGGAAAAAATATAVGTT
TAGDVKSDVGGGGLRRVLARVKAVRAGHFVVHIMFDVAGSNECRPCDVSV
LSWNEAQEGESAFAGGADARVKVEGGGNSGGGFMDTVHGSKPWRTSQHTA
FIRVSGHAFQALHGFVNKRTDGNVGEALASFLTWMANYDRVFQDPCTIAN
KLVATDSCTGEPLPPTLRTSDGSALLAESLAGTPQRKPQSPASSQTVSAA
AAGTGVATAEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021627Mediator_Med27
IPR039332FAM186A/FAM186B