prot_Ecto-sp13_S_contig11851.1590.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11851.1590.1
Unique Nameprot_Ecto-sp13_S_contig11851.1590.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length196
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11851.1590.1 vs. uniprot
Match: D7G3I0_ECTSI (Calponin-homology (CH) domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3I0_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 2.350e-45
Identity = 87/101 (86.14%), Postives = 89/101 (88.12%), Query Frame = 0 
Query:    1 METCRRWPPYRRRLESARRVQRSRLHRVPPAPFPAPAFLGRFRRRGDRGVGQQTELPQATTTSLLKPWLRRRRSHERPSLRSARAFAVARKPNLSLFPPRR 101
            METCRRWPP RRRLESAR  QRSRLHRV P+PFPAPA L RF RRGDRGVGQQTELPQATTTSLL+PWLRRR SHERP LRSARAF VARKPN S FPPRR
Sbjct:  496 METCRRWPPQRRRLESARHEQRSRLHRVLPSPFPAPASLARFWRRGDRGVGQQTELPQATTTSLLQPWLRRRPSHERPYLRSARAFVVARKPNPSSFPPRR 596
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11851.1590.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3I0_ECTSI2.350e-4586.14Calponin-homology (CH) domain-containing protein n... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11851contigEcto-sp13_S_contig11851:3162..4082 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11851.1590.1mRNA_Ecto-sp13_S_contig11851.1590.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11851 690..4995 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11851.1590.1 ID=prot_Ecto-sp13_S_contig11851.1590.1|Name=mRNA_Ecto-sp13_S_contig11851.1590.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=196bp
METCRRWPPYRRRLESARRVQRSRLHRVPPAPFPAPAFLGRFRRRGDRGV
GQQTELPQATTTSLLKPWLRRRRSHERPSLRSARAFAVARKPNLSLFPPR
RRRRCEEAARRRHRRHRPSGPSAFLPATAVMALIRMSPTAGGPHFSPTWR
RLKRWPRLQGAKAASWRRRRRQRRRRGGRSTTRRLWQPLLRGRHR*
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