prot_Ecto-sp13_S_contig1185.1588.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1185.1588.1
Unique Nameprot_Ecto-sp13_S_contig1185.1588.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length645
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1185.1588.1 vs. uniprot
Match: A0A6H5KR82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR82_9PHAE)

HSP 1 Score: 870 bits (2249), Expect = 1.070e-298
Identity = 519/652 (79.60%), Postives = 530/652 (81.29%), Query Frame = 0 
Query:    1 MLIHTAVASLAPRQAMRHRKGRQRKAVSLTPPSDFLSGGDREVLASYTAFSYQGNFSDVACRLMDTLPHQSPASEMGRKRLGRDRAGGGSRTDGGGGLTGIERVRHHDGDHVFYLYVTAELGILCVTDGIPVDREVFAYLALVEKAVSSAVAPLRRAADAEAVRRAASLALVESMNTWTSQADGGGRASPDPXXXXXXXXXXXXXXXXXXXXXXSRSPDLESRKTLERCLIEAVRRLHIERVETSLACLQQQAGENGGXXXXXXXXXXXXXXPNRALQPPLLTPKARRPTLPSPRGPLSPGVHGVLIEGLDGDDNXXXXXXXXXXXXXXXXSSVASRGRDGSGWGRRLNPAPPQQATEMLLSLSGSTTAENQRKGLSMPESSGRASPIATTPRSPSNTGHDVLAGAGAAAGAAKQGSTPIVGGWDELALGASTAAGARGGRGSADGGQQQRSRHA----------KEHGANSGSFTAPVLVDLAFDDGTGPAXXXXXXXXXXXXXXXXXXXXXXXXXXVGGMFRSAEHPQQDVSLPMRSPVGLSQQGHPQQQYFVGIQRAISVGHPVARGWDSGVSPSPAAGRPGPTGMRAATPPLGQHHQYTACPSQPPPHPPEPCVFGQNPPPRNPPPGRALPRPPSPASFAGYGEPQQG 642
            MLIHTAVASLAPRQAMR RKGRQRKAVSLTPPSDFLSGGDREVLASYTAFSYQGNFSDVACRL+DTLPHQSP+S MGRKRLGRDRAGG SRTDGGGGLTG+ERVRHHDGDHVFYLYVTAELGILCVTDGIP+D+EVF YLALVEKAVSSAVAPLRRAAD EAVRRAA LALVESMNTWTSQADGGGRASPD                       SRSPDLES+KTLERCLIEAVRRLHIERVETSLACLQQQAGENGGXXXXXXXXXXXX  PNRALQPPLLTPKARRPTLPSPRGPLSPGVHG+LIEGLDGD++ XXXXXXXXX        VASRGRDGSGWGRRLNPAPPQQATEMLL LSGSTTAENQRKGLSMPESSGRASP  TTPRSP +TGHDVLAGAGAAAGAAKQGS PIVGGWDELALGASTAAGAR GRGSA                     KEHGA+SGSFTAPVLVDLAFDDGTGPA     XXXXXX               VGGM RSAE PQQDVSL MRSPVGLSQQGHPQQQYF GIQRAISVGHPVARGWD GV PSPAAGRPGPTGMRAATPPLGQ HQYT                          PGRALPRPPSPASFAGYGE  QG
Sbjct:    1 MLIHTAVASLAPRQAMRQRKGRQRKAVSLTPPSDFLSGGDREVLASYTAFSYQGNFSDVACRLIDTLPHQSPSSGMGRKRLGRDRAGGESRTDGGGGLTGVERVRHHDGDHVFYLYVTAELGILCVTDGIPIDQEVFGYLALVEKAVSSAVAPLRRAADVEAVRRAAKLALVESMNTWTSQADGGGRASPDSRSSPTPTRSTTPISEDSLRSSTSRSPDLESQKTLERCLIEAVRRLHIERVETSLACLQQQAGENGGXXXXXXXXXXXXGSPNRALQPPLLTPKARRPTLPSPRGPLSPGVHGLLIEGLDGDNSSXXXXXXXXX--------VASRGRDGSGWGRRLNPAPPQQATEMLLLLSGSTTAENQRKGLSMPESSGRASPTTTTPRSPFSTGHDVLAGAGAAAGAAKQGSMPIVGGWDELALGASTAAGARAGRGSAXXXXXXXXXXXXXXXXXXXXXKEHGASSGSFTAPVLVDLAFDDGTGPAAGGGIXXXXXXTRASAAAAGVRGGVCVGGMPRSAERPQQDVSLSMRSPVGLSQQGHPQQQYFGGIQRAISVGHPVARGWDGGVPPSPAAGRPGPTGMRAATPPLGQPHQYTTGXXXXXXXXXXXXXXXXXXXXXXXXPGRALPRPPSPASFAGYGEHHQG 644
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BLAST of mRNA_Ecto-sp13_S_contig1185.1588.1 vs. uniprot
Match: D7FU19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU19_ECTSI)

HSP 1 Score: 362 bits (930), Expect = 3.780e-118
Identity = 186/192 (96.88%), Postives = 188/192 (97.92%), Query Frame = 0 
Query:    1 MLIHTAVASLAPRQAMRHRKGRQRKAVSLTPPSDFLSGGDREVLASYTAFSYQGNFSDVACRLMDTLPHQSPASEMGRKRLGRDRAGGGSRTDGGGGLTGIERVRHHDGDHVFYLYVTAELGILCVTDGIPVDREVFAYLALVEKAVSSAVAPLRRAADAEAVRRAASLALVESMNTWTSQADGGGRASPDP 192
            MLIHTAVASLAPRQAMRHRKGRQRKAVSLTPPSDFLSGGDREVLASYTAFSYQGNFSDV CRLMDTLPHQSPAS MGRKRLGRDRAGGGSRTDGGGGLTGIERVRHHDGDHVFYLYVTAELGILCVTDGIPVD+EVFAYLALVE+AVSSAVAPLRRAADAE VRRAASLALVESMNTWTSQ DGGGRASPDP
Sbjct:    1 MLIHTAVASLAPRQAMRHRKGRQRKAVSLTPPSDFLSGGDREVLASYTAFSYQGNFSDVVCRLMDTLPHQSPASGMGRKRLGRDRAGGGSRTDGGGGLTGIERVRHHDGDHVFYLYVTAELGILCVTDGIPVDQEVFAYLALVEEAVSSAVAPLRRAADAETVRRAASLALVESMNTWTSQVDGGGRASPDP 192
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1185.1588.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KR82_9PHAE1.070e-29879.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FU19_ECTSI3.780e-11896.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1185contigEcto-sp13_S_contig1185:4746..11695 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1185.1588.1mRNA_Ecto-sp13_S_contig1185.1588.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1185 4746..11932 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1185.1588.1 ID=prot_Ecto-sp13_S_contig1185.1588.1|Name=mRNA_Ecto-sp13_S_contig1185.1588.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=645bp
MLIHTAVASLAPRQAMRHRKGRQRKAVSLTPPSDFLSGGDREVLASYTAF
SYQGNFSDVACRLMDTLPHQSPASEMGRKRLGRDRAGGGSRTDGGGGLTG
IERVRHHDGDHVFYLYVTAELGILCVTDGIPVDREVFAYLALVEKAVSSA
VAPLRRAADAEAVRRAASLALVESMNTWTSQADGGGRASPDPRCSPTPTR
STTPTSGDSRRSSTSRSPDLESRKTLERCLIEAVRRLHIERVETSLACLQ
QQAGENGGGGGGVGGTDGKPGSPNRALQPPLLTPKARRPTLPSPRGPLSP
GVHGVLIEGLDGDDNSSGGGGGGGGGGGGGASSVASRGRDGSGWGRRLNP
APPQQATEMLLSLSGSTTAENQRKGLSMPESSGRASPIATTPRSPSNTGH
DVLAGAGAAAGAAKQGSTPIVGGWDELALGASTAAGARGGRGSADGGQQQ
RSRHAKEHGANSGSFTAPVLVDLAFDDGTGPATGGGIGANGGATRASAAA
AGVRGGVRVGGMFRSAEHPQQDVSLPMRSPVGLSQQGHPQQQYFVGIQRA
ISVGHPVARGWDSGVSPSPAAGRPGPTGMRAATPPLGQHHQYTACPSQPP
PHPPEPCVFGQNPPPRNPPPGRALPRPPSPASFAGYGEPQQGASH
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