prot_Ecto-sp13_S_contig11765.1517.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11765.1517.1
Unique Nameprot_Ecto-sp13_S_contig11765.1517.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length989
Homology
BLAST of mRNA_Ecto-sp13_S_contig11765.1517.1 vs. uniprot
Match: D7FT23_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT23_ECTSI)

HSP 1 Score: 1670 bits (4326), Expect = 0.000e+0
Identity = 905/987 (91.69%), Postives = 923/987 (93.52%), Query Frame = 0
Query:    1 TLLAGTSGRGAPLPFSGDYSVREAIDAVLARARVAVEFFEADRMAGRETSSGDGKXXXXXXXGVDRSAAVAGVQPGEVNGSSAGRLHLFLQHTAAVTCALRILAPYAWAARVKARTNGADEAGKKLEFGVRGQKRGSSTPRVASTRKRSPGTRKRSSAGDRGWPSLIGQLAEAFGAALRTVSRYKTSASSGGGQESRESGASAPRAVAGLWDMLVSCAADVSTPFIVRRPSGGNNEAGTGGRAA-GSRGELPSSPLGMTIRSVAEKALEFVVAPGWGYANEALEGLVLTGTALGPAEAPAPFPLKCFLLAAALSKGSGPGDDADDFGAAGVGGSRLRQRSSRGENDNEEGLPKKKRARGDDRRGSLRAGDSGRENHTGGGGTVDNHEDGDEFVFDVEETFLAVLRHDGSALVTQCSVAALPTLSLCGTRRGECLSNVSSSSVGRFTEHAATCNWKTRWLPALLELCENGGQGGSEEVRLELASGLLRLGASLDRTARNAGFATEATAAAAAALRRVQRPRHHPSRGGLPLGAMLGERVPKGPNVFVDMLPLWPALLKDESVAVRAATARAVLAAAAAAPLSRLRAAGRAGAAVLRLLTSMLSCGDPEVSWVVAGGAGLFVAEGGKMLRAMYHYDSVDAAAQGARGEEMDVEEXXXXXXXXXXXXXXXXARSREKALSRFIETIGNMLQEHGDGLRLGRWQSLHEFTALLRALGSIGCESDPSDDLGRTVYLWTLIRLVDVWVDEGNECAPAAHEQIVRVCNHGKAPLPHLLRLPPVSASHLGGSGDRQRDRGARALRAEARGDASRLGGRRGRSAPLGVVELEMDSGSILAPLIEKLMETGHVEEFVEQALGSRNFRAFLEDSVAHVLPVFVTGSKAVAVEQLAALCDQFEVGDARGKDPPQRLLNRHLPHVLTDVLMRGRSAWTDEKSSPGLQFLLKYFPESTPKRLIEGVLPQILEQVSWQLCGPRREEATVALQAVAHISYQYA 986
            T LAG SGRG PLPFSGD SVREAI AVLARARVAVEFFE DRMA RETSSGDG+       GVDR AAVAGVQP EV+GSSAGRLHL LQHTAAVTCALRILAPYA AARVKARTNGADEAGKKLEFGVRGQKRGSSTPRVASTRKRSPGTRKRSSAGDRGWPSLI QLAEAFGAALRTVSRYKTSASSGGGQESRESGASAPRAVAGLWDMLVSCAADV  PFIVRRP GG+NE GTGGRAA GSRGELPSS LG T+RS AEKALEFV+APGWGYANEALEGL LTGT LGP EAPAPFPLKCFLLAAALSKGSGPGDDADDFGAAGVGGSRLR+RSSRGE+DNEEG PKKKRARGD+RRGSL AGD GRENHTGGGGT DNHE GD FVFDVEE FLAVLRHDGSALVT+CSVAALPTLSLCG  RGECLSNVSSS  GRFTEHAATCNWKTRWLPALLELCENGGQGGSEEVRLELASGLLRLGASLDRTARN+G ATEATA AAAALRR+QRPRHHPSRGGLPLGAMLG+RVP GPNVFVDMLPLWPALLKDESVAVRAA ARAVLAAA AAPLSRLR AGRAGAAVLRLLTSMLSCGDPEVSWVVAGGAGLF+AEGGKMLRAMYHY+SVDAAAQGA GEEM+V  XXXXXXXXXXXXXXXX RSREKALSRFIETIG MLQEHGDGLRLGRWQSLHEFTALLRALGSIGCESDPSDDLGRTVYLWTLIRLVDVWVDEGNECAPAAHEQIVRVCNHGKAPLPHLLRLPPVSAS+LGGSGDRQRDRGARA R      A RLGGRRGRSAPLGVV LEMDSGSILAPLIEKLMETGHVEEFVEQALGSRNFRAFLEDS+AHVLPVFV GSKA AVE LAALCDQFEVGDARGKDPPQRLLNRHLPHVLTDVLMRGRSAWTDEKSSPGLQFLLKYFPESTPKRLIEGVLPQILEQVSWQLCGPRREEATVALQAVAHISYQ+A
Sbjct:  660 TPLAGRSGRGVPLPFSGDSSVREAIHAVLARARVAVEFFETDRMAARETSSGDGEGDGGGIGGVDRPAAVAGVQPEEVSGSSAGRLHLLLQHTAAVTCALRILAPYARAARVKARTNGADEAGKKLEFGVRGQKRGSSTPRVASTRKRSPGTRKRSSAGDRGWPSLIDQLAEAFGAALRTVSRYKTSASSGGGQESRESGASAPRAVAGLWDMLVSCAADVPAPFIVRRPPGGSNETGTGGRAAAGSRGELPSSRLGTTVRSAAEKALEFVLAPGWGYANEALEGLALTGTLLGPVEAPAPFPLKCFLLAAALSKGSGPGDDADDFGAAGVGGSRLRRRSSRGEDDNEEGRPKKKRARGDNRRGSLGAGDRGRENHTGGGGTADNHEGGDNFVFDVEEAFLAVLRHDGSALVTRCSVAALPTLSLCGPNRGECLSNVSSSGCGRFTEHAATCNWKTRWLPALLELCENGGQGGSEEVRLELASGLLRLGASLDRTARNSGVATEATATAAAALRRLQRPRHHPSRGGLPLGAMLGKRVPVGPNVFVDMLPLWPALLKDESVAVRAAAARAVLAAAGAAPLSRLRLAGRAGAAVLRLLTSMLSCGDPEVSWVVAGGAGLFLAEGGKMLRAMYHYNSVDAAAQGAPGEEMEVXXXXXXXXXXXXXXXXXXXRSREKALSRFIETIGKMLQEHGDGLRLGRWQSLHEFTALLRALGSIGCESDPSDDLGRTVYLWTLIRLVDVWVDEGNECAPAAHEQIVRVCNHGKAPLPHLLRLPPVSASYLGGSGDRQRDRGARASR------APRLGGRRGRSAPLGVVGLEMDSGSILAPLIEKLMETGHVEEFVEQALGSRNFRAFLEDSIAHVLPVFVAGSKAAAVEHLAALCDQFEVGDARGKDPPQRLLNRHLPHVLTDVLMRGRSAWTDEKSSPGLQFLLKYFPESTPKRLIEGVLPQILEQVSWQLCGPRREEATVALQAVAHISYQHA 1640          
BLAST of mRNA_Ecto-sp13_S_contig11765.1517.1 vs. uniprot
Match: A0A8K1FDT3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDT3_PYTOL)

HSP 1 Score: 60.1 bits (144), Expect = 2.820e-5
Identity = 43/170 (25.29%), Postives = 74/170 (43.53%), Query Frame = 0
Query:  826 GSILAPLIEKLMETGHVEEFVEQALGSRNFRAFLEDSVAHVLPVFVTGSKAVAVEQLAALCDQFEVGDARGKDPPQ----------RLLNRHLPHVLTDVLMRGRSAWTDEKSSPGLQFLLKYFPES-TPKRLIEGVLPQILEQVSWQLCGPRREEATVALQAVAHISYQ 984
            G +  PL++ L+ T  V++FV   +G    +  L DS A+VLP +V       + Q    C+Q + GD   +D             +LL  ++  V  +++M        E       FL K+FPE+ T   ++     Q+L  ++ +L G R   A +A   ++    Q
Sbjct:  457 GEVYFPLVDNLLRTRSVKDFVSTFMGQTMTKGILTDSAAYVLPHYVIHRDEDMLNQFVLECNQGD-GDVEMEDVDSEAHSENTSIGQLLQENISSVFKELIMHQVQEGKKEDHMKDWNFLFKFFPENFTIGDVLSLRQLQVLSAIAAELGGERHHHAKLAFHEISQYVIQ 625          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11765.1517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FT23_ECTSI0.000e+091.69Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8K1FDT3_PYTOL2.820e-525.29Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 651..671
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 455..761

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11765contigEcto-sp13_S_contig11765:173..5296 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11765.1517.1mRNA_Ecto-sp13_S_contig11765.1517.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11765 173..5296 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11765.1517.1 ID=prot_Ecto-sp13_S_contig11765.1517.1|Name=mRNA_Ecto-sp13_S_contig11765.1517.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=989bp
TLLAGTSGRGAPLPFSGDYSVREAIDAVLARARVAVEFFEADRMAGRETS
SGDGKGDGGGSGGVDRSAAVAGVQPGEVNGSSAGRLHLFLQHTAAVTCAL
RILAPYAWAARVKARTNGADEAGKKLEFGVRGQKRGSSTPRVASTRKRSP
GTRKRSSAGDRGWPSLIGQLAEAFGAALRTVSRYKTSASSGGGQESRESG
ASAPRAVAGLWDMLVSCAADVSTPFIVRRPSGGNNEAGTGGRAAGSRGEL
PSSPLGMTIRSVAEKALEFVVAPGWGYANEALEGLVLTGTALGPAEAPAP
FPLKCFLLAAALSKGSGPGDDADDFGAAGVGGSRLRQRSSRGENDNEEGL
PKKKRARGDDRRGSLRAGDSGRENHTGGGGTVDNHEDGDEFVFDVEETFL
AVLRHDGSALVTQCSVAALPTLSLCGTRRGECLSNVSSSSVGRFTEHAAT
CNWKTRWLPALLELCENGGQGGSEEVRLELASGLLRLGASLDRTARNAGF
ATEATAAAAAALRRVQRPRHHPSRGGLPLGAMLGERVPKGPNVFVDMLPL
WPALLKDESVAVRAATARAVLAAAAAAPLSRLRAAGRAGAAVLRLLTSML
SCGDPEVSWVVAGGAGLFVAEGGKMLRAMYHYDSVDAAAQGARGEEMDVE
EEEEEETCDAQEEEEREARSREKALSRFIETIGNMLQEHGDGLRLGRWQS
LHEFTALLRALGSIGCESDPSDDLGRTVYLWTLIRLVDVWVDEGNECAPA
AHEQIVRVCNHGKAPLPHLLRLPPVSASHLGGSGDRQRDRGARALRAEAR
GDASRLGGRRGRSAPLGVVELEMDSGSILAPLIEKLMETGHVEEFVEQAL
GSRNFRAFLEDSVAHVLPVFVTGSKAVAVEQLAALCDQFEVGDARGKDPP
QRLLNRHLPHVLTDVLMRGRSAWTDEKSSPGLQFLLKYFPESTPKRLIEG
VLPQILEQVSWQLCGPRREEATVALQAVAHISYQYAVSF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold