prot_Ecto-sp13_S_contig11732.1493.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11732.1493.1
Unique Nameprot_Ecto-sp13_S_contig11732.1493.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length386
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11732.1493.1 vs. uniprot
Match: D7FZA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA5_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 4.680e-79
Identity = 360/397 (90.68%), Postives = 363/397 (91.44%), Query Frame = 0 
Query:    1 MENSLRLKEAELKELRTTADKADKDKGTGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-CQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEKLEEEREVHSTKVYALEEELRSVASQPRLHGQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------GGQGDQRCGQGSEGEIGRRDHDDGGDSRPGLHDAPGPXXXXXXXXXLETAATEDDMDDLYGDMGDAVGQAFEP--AEGQEGAGAGASAGGDPMXXXXXXXXXXXXXXXXXXXX--VATRARSTRRSTRSRK 385
            MENSLRLKEAELKELRTTADKADKDKG GAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEKLEEEREVHSTKVYALEEELR VASQP LHGQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              GGQ ++R GQG EGEIGR DHDDGG+SRPG HD    XXXXXXXXX ETAATEDDMDDLYGDMGDAVGQAFEP  AEGQEG GAGASAGGDPMXXXXXXXXXXXXXXXXXXX   VATRARSTRRSTRSRK
Sbjct:   71 MENSLRLKEAELKELRTTADKADKDKGKGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEKLEEEREVHSTKVYALEEELRLVASQPHLHGQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSWNEAVQQXHDYDGGQRERRRGQGGEGEIGRNDHDDGGNSRPGSHDEXXXXXXXXXXXXXETAATEDDMDDLYGDMGDAVGQAFEPNSAEGQEGPGAGASAGGDPMXXXXXXXXXXXXXXXXXXXPPPVATRARSTRRSTRSRK 467
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BLAST of mRNA_Ecto-sp13_S_contig11732.1493.1 vs. uniprot
Match: A0A6H5L7M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7M1_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 3.300e-52
Identity = 224/396 (56.57%), Postives = 227/396 (57.32%), Query Frame = 0 
Query:    1 MENSLRLKEAELKELRTTADKADKDKGTGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEKLEEEREVHSTKVYALEEELRSVASQPRLHGQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGQGDQRCGQGSEGEIGRRDHDDGGDSRPGLHDAPGPXXXXXXXXXLETAATEDDMDDLYGDMGDAVGQAFEPAEGQEGAGAGASAGGDPMXXXXXXXXXXXXXXXXXXXX-----------VATRARSTRRSTRSRK 385
            MENSLRLKEAELKELRTTADKADKDKGTGAAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEKLEEERE+HSTKVYALEEELR VA                                                                                                                                               PG HD PGPXXXXXXXXXLETAATEDD+DDLYGDMGDAVGQAFEPAEGQ+GAG          XXXXXXXXXXXXXXXXXXXX           VATRARSTRRSTRSRK
Sbjct:   71 MENSLRLKEAELKELRTTADKADKDKGTGAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEKLEEEREMHSTKVYALEEELRLVA-----------------------------------------------------------------------------------------------------------------------------------------------PGSHDEPGPXXXXXXXXXLETAATEDDIDDLYGDMGDAVGQAFEPAEGQDGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPPPVATRARSTRRSTRSRK 323
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11732.1493.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZA5_ECTSI4.680e-7990.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7M1_9PHAE3.300e-5256.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..91
NoneNo IPR availableCOILSCoilCoilcoord: 104..138
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 28..181
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 28..181
IPR029732WTAP/Mum2 familyPFAMPF17098Wtapcoord: 1..132
e-value: 5.3E-25
score: 88.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11732contigEcto-sp13_S_contig11732:2446..5194 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11732.1493.1mRNA_Ecto-sp13_S_contig11732.1493.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11732 1723..5302 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11732.1493.1 ID=prot_Ecto-sp13_S_contig11732.1493.1|Name=mRNA_Ecto-sp13_S_contig11732.1493.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=386bp
MENSLRLKEAELKELRTTADKADKDKGTGAAAKGTGAAGKPPPAGGTGSN
SGASAKGESTVARASALVARCQRLEQENEELAASADVAKVAQLTSEKAVA
EAYAGELKTALEEAYEYIEKLEEEREVHSTKVYALEEELRSVASQPRLHG
QQQEQQQQPQQGHEQQQQQEQQQQHHEQQHQQHHQQQQQHQHQDHHDPNQ
HQQHHHLQQQQDYRAAPQQRSLGAASSVSDMQQQSSPSSRDDKSSWNEAV
QQQHHHHHGGQGDQRCGQGSEGEIGRRDHDDGGDSRPGLHDAPGPPPPSP
PAAALETAATEDDMDDLYGDMGDAVGQAFEPAEGQEGAGAGASAGGDPME
EEETQEQEQERRREETPPPVATRARSTRRSTRSRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029732WTAP/Mum2