prot_Ecto-sp13_S_contig11721.1487.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11721.1487.1
Unique Nameprot_Ecto-sp13_S_contig11721.1487.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length122
Homology
BLAST of mRNA_Ecto-sp13_S_contig11721.1487.1 vs. uniprot
Match: D7G6A0_ECTSI (Flagellar inner arm dynein light chain Tctex1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6A0_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 6.980e-72
Identity = 107/121 (88.43%), Postives = 107/121 (88.43%), Query Frame = 0
Query:    1 MDFQDDAAEFSSEDVDTIVKNAITGCLTDVMYNPKKVTDWTNTIVDNCLKELQPLNKPYKYIITCIIMQKNGAGVNTCASMVWDTTKDNFCQVPWENQNMHCIVTVYGCAVHIDNANELES 121
            MDFQDDAAEFSSEDVDTIVKNAITGCLTDVMYNPKK              ELQPLNKPYKYIITCIIMQKNGAGVNTCASMVWDTTKDNFCQVPWENQNMHCIVTVYGCAVHIDNANELES
Sbjct:    1 MDFQDDAAEFSSEDVDTIVKNAITGCLTDVMYNPKK--------------ELQPLNKPYKYIITCIIMQKNGAGVNTCASMVWDTTKDNFCQVPWENQNMHCIVTVYGCAVHIDNANELES 107          
BLAST of mRNA_Ecto-sp13_S_contig11721.1487.1 vs. uniprot
Match: A0A835YRL3_9STRA (Flagellar inner arm dynein light chain Tctex1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRL3_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.450e-69
Identity = 98/120 (81.67%), Postives = 108/120 (90.00%), Query Frame = 0
Query:    1 MDFQDDAAEFSSEDVDTIVKNAITGCLTDVMYNPKKVTDWTNTIVDNCLKELQPLNKPYKYIITCIIMQKNGAGVNTCASMVWDTTKDNFCQVPWENQNMHCIVTVYGCAVHIDNANELE 120
            MDF DDAA++S EDVDTIVKNAI GCLTDV YN KKVTDWTN IVDNCL+ELQ LNKP+KYIITCIIMQKNGAG+NT A+M WD  KDN+CQVPWENQNMHCIVTVYGCAV+IDN +EL+
Sbjct:    1 MDFADDAAKYSVEDVDTIVKNAIAGCLTDVTYNAKKVTDWTNHIVDNCLRELQSLNKPFKYIITCIIMQKNGAGLNTSATMFWDPEKDNYCQVPWENQNMHCIVTVYGCAVNIDNTHELD 120          
BLAST of mRNA_Ecto-sp13_S_contig11721.1487.1 vs. uniprot
Match: A0A6U1NWB1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NWB1_9STRA)

HSP 1 Score: 187 bits (475), Expect = 2.380e-59
Identity = 86/120 (71.67%), Postives = 97/120 (80.83%), Query Frame = 0
Query:    1 MDFQDDAAEFSSEDVDTIVKNAITGCLTDVMYNPKKVTDWTNTIVDNCLKELQPLNKPYKYIITCIIMQKNGAGVNTCASMVWDTTKDNFCQVPWENQNMHCIVTVYGCAVHIDNANELE 120
            M+FQDDAAEFS EDV+T  KNAI  CL    Y  KKV DWTNTIVD CLKELQ +N+PYKY++TCIIMQKNGAG+NT ASM WDTTKD  C+V WEN  +HCIVTV+G AVHIDN NEL+
Sbjct:    1 MEFQDDAAEFSQEDVETTAKNAIRSCLDKHNYQAKKVDDWTNTIVDTCLKELQSMNRPYKYVVTCIIMQKNGAGMNTTASMFWDTTKDGLCKVYWENHTIHCIVTVFGLAVHIDNQNELD 120          
BLAST of mRNA_Ecto-sp13_S_contig11721.1487.1 vs. uniprot
Match: A0A482SIW0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SIW0_9ARCH)

HSP 1 Score: 159 bits (403), Expect = 5.010e-48
Identity = 72/118 (61.02%), Postives = 91/118 (77.12%), Query Frame = 0
Query:    3 FQDDAAEFSSEDVDTIVKNAITGCLTDVMYNPKKVTDWTNTIVDNCLKELQPLNKPYKYIITCIIMQKNGAGVNTCASMVWDTTKDNFCQVPWENQNMHCIVTVYGCAVHIDNANELE 120
            FQDD+AEFS+EDV+ IV+ AI   L D  YN KKV +WTN IV NCLK+LQ L +P+KYIITC+IMQK GAG+NT  SM WDT KD +C+VPW+N  M C VTVYG +V+ID+  +++
Sbjct:   28 FQDDSAEFSTEDVEGIVRLAIQNSLNDASYNSKKVNEWTNNIVTNCLKDLQGLGRPFKYIITCMIMQKTGAGLNTTTSMFWDTAKDGYCKVPWQNNTMTCTVTVYGLSVNIDDPQDVD 145          
BLAST of mRNA_Ecto-sp13_S_contig11721.1487.1 vs. uniprot
Match: A0A7S3JST1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JST1_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.030e-43
Identity = 64/115 (55.65%), Postives = 89/115 (77.39%), Query Frame = 0
Query:    6 DAAEFSSEDVDTIVKNAITGCLTDVMYNPKKVTDWTNTIVDNCLKELQPLNKPYKYIITCIIMQKNGAGVNTCASMVWDTTKDNFCQVPWENQNMHCIVTVYGCAVHIDNANELE 120
            D   F  ED+++IVKNAIT  L+D +YN KKV DW N+IVD CLKELQ LN+P+KY++TC IMQKNGAG++T  +++WD +KD    +PWEN +MH I+TV+G A+++DN  E++
Sbjct:    2 DDESFPQEDIESIVKNAITSTLSDHLYNSKKVNDWINSIVDACLKELQSLNRPFKYVVTCGIMQKNGAGLDTGVALIWDHSKDGLVCIPWENTSMHVIITVFGLALNVDNLAEMD 116          
BLAST of mRNA_Ecto-sp13_S_contig11721.1487.1 vs. uniprot
Match: A0A7S2DAW6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DAW6_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.560e-43
Identity = 70/111 (63.06%), Postives = 86/111 (77.48%), Query Frame = 0
Query:   10 FSSEDVDTIVKNAITGCLTDVMYNPKKVTDWTNTIVDNCLKELQPLNKPYKYIITCIIMQKNGAGVNTCASMVWDTTKDNFCQVPWENQNMHCIVTVYGCAVHIDNANELE 120
            FS EDVD+IVK AIT  L DVMYN KKV D  N IVD CL+EL+ L +P++YI+TCIIMQKNGAG+NT A+M WDT+KD  C V W N  M+ +VTV+G AV+IDN+ EL+
Sbjct:    8 FSPEDVDSIVKLAITQNLADVMYNQKKVNDQINKIVDKCLEELRKLERPFRYIVTCIIMQKNGAGMNTAATMFWDTSKDGKCVVQWSNDTMNVVVTVFGLAVNIDNSGELD 118          
BLAST of mRNA_Ecto-sp13_S_contig11721.1487.1 vs. uniprot
Match: F0YFG3_AURAN (Uncharacterized protein DLC1 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFG3_AURAN)

HSP 1 Score: 134 bits (338), Expect = 1.540e-38
Identity = 60/115 (52.17%), Postives = 83/115 (72.17%), Query Frame = 0
Query:    6 DAAEFSSEDVDTIVKNAITGCLTDVMYNPKKVTDWTNTIVDNCLKELQPLNKPYKYIITCIIMQKNGAGVNTCASMVWDTTKDNFCQVPWENQNMHCIVTVYGCAVHIDNANELE 120
            D  +F  ED++ +VKNAI+ CL++  Y  K V +  + IVD CLKELQ LN+P+KYI+TCIIMQKNGAG++T A++ WD  KD    +PWEN  M  +VTV+G A+++DN  EL+
Sbjct:    2 DEDQFPQEDIENLVKNAISACLSEFQYQAKLVNNKIHAIVDACLKELQTLNRPFKYIVTCIIMQKNGAGLDTGAALFWDNAKDGLVCIPWENSQMSVVVTVFGTALNVDNLAELD 116          
BLAST of mRNA_Ecto-sp13_S_contig11721.1487.1 vs. uniprot
Match: A0A7R9W941_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W941_9STRA)

HSP 1 Score: 133 bits (334), Expect = 7.250e-38
Identity = 59/118 (50.00%), Postives = 83/118 (70.34%), Query Frame = 0
Query:    3 FQDDAAEFSSEDVDTIVKNAITGCLTDVMYNPKKVTDWTNTIVDNCLKELQPLNKPYKYIITCIIMQKNGAGVNTCASMVWDTTKDNFCQVPWENQNMHCIVTVYGCAVHIDNANELE 120
            FQD   EF  EDV+T++KNAI   L+D  Y   K  DW+N+++   LK L+ LN+PYKY IT +I+QKNGAG+ + +S  WD +KD  C+V WEN  MHC+VTV+G +V++D+  EL+
Sbjct:    4 FQDLGEEFVVEDVETVIKNAIGVVLSDASYISSKANDWSNSVISAALKGLESLNRPYKYCITVMIVQKNGAGLVSASSTYWDASKDGLCKVTWENSTMHCVVTVFGTSVNVDSPTELD 121          
BLAST of mRNA_Ecto-sp13_S_contig11721.1487.1 vs. uniprot
Match: A0A0P1ABG3_PLAHL (Dynein light chain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ABG3_PLAHL)

HSP 1 Score: 125 bits (315), Expect = 5.130e-35
Identity = 60/104 (57.69%), Postives = 72/104 (69.23%), Query Frame = 0
Query:    8 AEFSSEDVDTIVKNAITGCLTDVMYNPKKVTDWTNTIVDNCLKELQPLNKPYKYIITCIIMQKNGAGVNTCASMVWDTTKDNFCQVPWENQNMHCIVTVYGCAV 111
            +EFS EDV  I K AI   L D +YN KKV DW+NT+V   L  LQ LNKP+KY +TC+IMQK GAG+ T A+  WDTT D  C V WEN  ++CIVTVYG A+
Sbjct:    6 SEFSQEDVLPIAKMAIEAALKDTVYNRKKVLDWSNTLVATVLAGLQSLNKPFKYAVTCLIMQKTGAGMATAAACFWDTTMDGNCTVLWENSTINCIVTVYGVAI 109          
BLAST of mRNA_Ecto-sp13_S_contig11721.1487.1 vs. uniprot
Match: A0A485KQ34_9STRA (Aste57867_10139 protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KQ34_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.510e-34
Identity = 58/104 (55.77%), Postives = 71/104 (68.27%), Query Frame = 0
Query:    8 AEFSSEDVDTIVKNAITGCLTDVMYNPKKVTDWTNTIVDNCLKELQPLNKPYKYIITCIIMQKNGAGVNTCASMVWDTTKDNFCQVPWENQNMHCIVTVYGCAV 111
            +EFSS+DV  I KNAI   L D +YN KKV DWTN++V   L  LQ +NKP+KY +TC+IMQK GAGV T A+  WD   D  C V WEN  + C+VTVYG A+
Sbjct:    6 SEFSSDDVVPISKNAIESTLKDTVYNRKKVNDWTNSLVAIVLSGLQNINKPFKYAVTCLIMQKTGAGVTTAAACYWDAVVDGHCTVLWENSTIQCVVTVYGVAI 109          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11721.1487.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6A0_ECTSI6.980e-7288.43Flagellar inner arm dynein light chain Tctex1 n=2 ... [more]
A0A835YRL3_9STRA1.450e-6981.67Flagellar inner arm dynein light chain Tctex1 n=1 ... [more]
A0A6U1NWB1_9STRA2.380e-5971.67Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A482SIW0_9ARCH5.010e-4861.02Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S3JST1_9STRA1.030e-4355.65Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2DAW6_9STRA1.560e-4363.06Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0YFG3_AURAN1.540e-3852.17Uncharacterized protein DLC1 n=1 Tax=Aureococcus a... [more]
A0A7R9W941_9STRA7.250e-3850.00Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A0P1ABG3_PLAHL5.130e-3557.69Dynein light chain n=1 Tax=Plasmopara halstedii Ta... [more]
A0A485KQ34_9STRA1.510e-3455.77Aste57867_10139 protein n=7 Tax=Saprolegniaceae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 119..121
NoneNo IPR availablePANTHERPTHR21255:SF4DYNEIN LIGHT CHAIN TCTEX-TYPEcoord: 4..110
IPR005334Dynein light chain Tctex-1 likePFAMPF03645Tctex-1coord: 15..109
e-value: 4.1E-28
score: 97.6
IPR005334Dynein light chain Tctex-1 likePANTHERPTHR21255T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAINcoord: 4..110
IPR038586Tctex-1-like superfamilyGENE3D3.30.1140.40coord: 12..111
e-value: 5.0E-38
score: 131.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11721contigEcto-sp13_S_contig11721:1375..3087 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11721.1487.1mRNA_Ecto-sp13_S_contig11721.1487.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11721 1194..3450 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11721.1487.1 ID=prot_Ecto-sp13_S_contig11721.1487.1|Name=mRNA_Ecto-sp13_S_contig11721.1487.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=122bp
MDFQDDAAEFSSEDVDTIVKNAITGCLTDVMYNPKKVTDWTNTIVDNCLK
ELQPLNKPYKYIITCIIMQKNGAGVNTCASMVWDTTKDNFCQVPWENQNM
HCIVTVYGCAVHIDNANELES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005334Tctex-1-like
IPR038586Tctex-1-like_sf