prot_Ecto-sp13_S_contig1166.1440.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1166.1440.1
Unique Nameprot_Ecto-sp13_S_contig1166.1440.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length222
Homology
BLAST of mRNA_Ecto-sp13_S_contig1166.1440.1 vs. uniprot
Match: D8LBX1_ECTSI (Histone-like transcription factor family (CBF/NF-Y) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX1_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 2.290e-56
Identity = 153/221 (69.23%), Postives = 158/221 (71.49%), Query Frame = 0
Query:    1 MSELNPGVPPAQQLNVEGQVPVEQHPSSHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAVGTXXXXXXXXXXXXRQDPVPTAGGTRNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPLPVGLPKSMVRRIMKLGEETRNISNEALVIVVKASEIFLEKFAARAFDHAEKLGRKTIKYRDVSDVRVEDPNLLFLEAVVPP 221
            MSE +PGVPP QQL+VEGQVPVEQ PSSHN         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  RQDPVPTAGGT++                              TPLPVGLP SMV+RIMKLGEETRNIS EALVIVVKASEIFLEK AARAFDHAEKLGRKTIKYRDVSDVRVEDPNLLFLEAVVPP
Sbjct:    3 MSEPDPGVPPTQQLSVEGQVPVEQQPSSHNNGSTSAPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPAAADTAEA------RQDPVPTAGGTKDEPGTPSASAASGAVKKEGGSQPRSAKRPRDTPLPVGLPPSMVKRIMKLGEETRNISKEALVIVVKASEIFLEKLAARAFDHAEKLGRKTIKYRDVSDVRVEDPNLLFLEAVVPP 217          
BLAST of mRNA_Ecto-sp13_S_contig1166.1440.1 vs. uniprot
Match: A0A6H5JWZ4_9PHAE (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWZ4_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 3.600e-49
Identity = 144/221 (65.16%), Postives = 148/221 (66.97%), Query Frame = 0
Query:    1 MSELNPGVPPAQQLNVEGQVPVEQHPSSHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAVGTXXXXXXXXXXXXRQDPVPTAGGTRNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPLPVGLPKSMVRRIMKLGEETRNISNEALVIVVKASEIFLEKFAARAFDHAEKLGRKTIKYRDVSDVRVEDPNLLFLEAVVPP 221
            MSE +PGVPP QQLNVE      Q PS HN            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  RQDPVP AG T++G                             TPLPVGLP SMVRRIMKLGEETRNIS EALVIVVKASEIFLEKFAARAFDHAEKLGRKTIKYRDVSDVR+EDPNLLFLEAVVPP
Sbjct:    1 MSEPDPGVPPTQQLNVE------QQPSPHNNGSLSAPPSAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAVPAAADEA--RQDPVPAAGETKDGPGTTSAPAASGAVKKEGGSQPRSAKRPRDTPLPVGLPPSMVRRIMKLGEETRNISKEALVIVVKASEIFLEKFAARAFDHAEKLGRKTIKYRDVSDVRLEDPNLLFLEAVVPP 213          
BLAST of mRNA_Ecto-sp13_S_contig1166.1440.1 vs. uniprot
Match: A0A6V1PCP5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PCP5_HETAK)

HSP 1 Score: 85.9 bits (211), Expect = 1.560e-17
Identity = 41/77 (53.25%), Postives = 55/77 (71.43%), Query Frame = 0
Query:  144 LPKSMVRRIMKLGEETRNISNEALVIVVKASEIFLEKFAARAFDHAEKLGRKTIKYRDVSDVRVEDPNLLFLEAVVP 220
            LP++ V+RIMKL +E + I+ E   +V KA+ +FLEKFA  +F  A+  G K I+Y DV+D RV DPNLLFLE V+P
Sbjct:   75 LPRASVKRIMKLDDEIKQINKEGTTLVEKAAVLFLEKFAQDSFAKAQTRGAKMIRYEDVADARVSDPNLLFLEGVIP 151          
BLAST of mRNA_Ecto-sp13_S_contig1166.1440.1 vs. uniprot
Match: A0A7S2G0X5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G0X5_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 2.760e-15
Identity = 36/79 (45.57%), Postives = 56/79 (70.89%), Query Frame = 0
Query:  142 VGLPKSMVRRIMKLGEETRNISNEALVIVVKASEIFLEKFAARAFDHAEKLGRKTIKYRDVSDVRVEDPNLLFLEAVVP 220
            + +PK+ V+RIMKL ++ + +  EA+++V KA+E+FLE FA  +  HA K+ RK IKY D+ + RV D NL FL+ ++P
Sbjct:   51 LAIPKNAVKRIMKLEDDVKQVQAEAVLLVAKATELFLESFALDSHKHAVKMERKQIKYEDLLETRVADSNLEFLKHIIP 129          
BLAST of mRNA_Ecto-sp13_S_contig1166.1440.1 vs. uniprot
Match: A0A7S2UXP1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXP1_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 9.940e-15
Identity = 37/77 (48.05%), Postives = 55/77 (71.43%), Query Frame = 0
Query:  144 LPKSMVRRIMKLGEETRNISNEALVIVVKASEIFLEKFAARAFDHAEKLGRKTIKYRDVSDVRVEDPNLLFLEAVVP 220
            LPK+ VRRIMKL +ET+ ++ EA+ +  KA+EI +EK A  +F+ A+  G + I+Y DV+  R+ DPNL FL+ V+P
Sbjct:   65 LPKNAVRRIMKLDQETKTVTQEAVYLAGKATEILVEKLARDSFEQAKTRGGRMIRYEDVAKARIADPNLDFLKDVMP 141          
BLAST of mRNA_Ecto-sp13_S_contig1166.1440.1 vs. uniprot
Match: F0Y9H8_AURAN (CBFD_NFYB_HMF domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9H8_AURAN)

HSP 1 Score: 74.3 bits (181), Expect = 5.370e-14
Identity = 35/77 (45.45%), Postives = 51/77 (66.23%), Query Frame = 0
Query:  144 LPKSMVRRIMKLGEETRNISNEALVIVVKASEIFLEKFAARAFDHAEKLGRKTIKYRDVSDVRVEDPNLLFLEAVVP 220
            +PK+ V+RIMKL  E   ++N+A+++V KA+E+FLEKF+A A   A    R T+KY D++D    D N  FL  V+P
Sbjct:    4 IPKAAVKRIMKLDPEVNQVANDAVILVAKATEMFLEKFSAEARAQATLRSRTTVKYEDIADTVSGDKNYEFLATVIP 80          
BLAST of mRNA_Ecto-sp13_S_contig1166.1440.1 vs. uniprot
Match: A0A7S3JZM4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZM4_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.780e-12
Identity = 32/81 (39.51%), Postives = 52/81 (64.20%), Query Frame = 0
Query:  141 PVGLPKSMVRRIMKLGEETRNISNEALVIVVKASEIFLEKFAARAFDHAEKLGRKTIKYRDVSDVRVEDPNLLFLEAVVPP 221
            P+ +PK  ++RIMK+  +   ++N+A+++V KA+E+F+EK    A D A   GRK I Y D+ + R  D  L F+E ++PP
Sbjct:   61 PLTIPKGSIKRIMKIDGDVNQVANDAIILVAKATELFMEKLTKDAHDIATANGRKIINYNDLVNARELDSELHFMEPILPP 141          
BLAST of mRNA_Ecto-sp13_S_contig1166.1440.1 vs. uniprot
Match: W7TNB3_9STRA (Histone-like transcription factor family protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNB3_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.240e-12
Identity = 31/79 (39.24%), Postives = 54/79 (68.35%), Query Frame = 0
Query:  142 VGLPKSMVRRIMKLGEETRNISNEALVIVVKASEIFLEKFAARAFDHAEKLGRKTIKYRDVSDVRVEDPNLLFLEAVVP 220
            + +P++ ++RIMKL  +T+ +S +A++++ KA+E+F++K A  +   A    RKTIKY D++D R    N+ FL+ VVP
Sbjct:  118 LAIPRASIKRIMKLDPDTKQLSQDAIMVMAKATELFIDKLAKASHSMAVTNKRKTIKYEDIADARFSQKNMEFLDGVVP 196          
BLAST of mRNA_Ecto-sp13_S_contig1166.1440.1 vs. uniprot
Match: A0A7S2RT01_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RT01_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.460e-11
Identity = 33/80 (41.25%), Postives = 55/80 (68.75%), Query Frame = 0
Query:  142 VGLPKSMVRRIMKLGEETRNISNEALVIVVKASEIFLEKFAARAFDHAEKLGRKTIKYRDVSDVRVEDPNLL-FLEAVVP 220
            V +P++ V+RIMKL E+ + +  EA+++V KA+E+FLEKFA  +   +++  RK +KY D+ + R+ D N L FL  ++P
Sbjct:   74 VAIPRNAVKRIMKLQEDVKQVQAEAVLLVAKATELFLEKFAKDSHATSQRAERKQLKYEDLLETRLNDENTLAFLTHIIP 153          
BLAST of mRNA_Ecto-sp13_S_contig1166.1440.1 vs. uniprot
Match: F0ZTN1_DICPU (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZTN1_DICPU)

HSP 1 Score: 63.5 bits (153), Expect = 4.650e-9
Identity = 29/77 (37.66%), Postives = 50/77 (64.94%), Query Frame = 0
Query:  144 LPKSMVRRIMKLGEETRNISNEALVIVVKASEIFLEKFAARAFDHAEKLGRKTIKYRDVSDVRVEDPNLLFLEAVVP 220
            LP + ++RIMK  ++ + IS++AL++V K++E+FL+ F   A+   +  GRK + Y+D+S    +  NL FL  +VP
Sbjct:   84 LPIARIKRIMKNDKDVKLISSDALMLVTKSTELFLDYFCKEAYKKTKSQGRKILSYKDISSAIKDIENLTFLTEIVP 160          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1166.1440.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBX1_ECTSI2.290e-5669.23Histone-like transcription factor family (CBF/NF-Y... [more]
A0A6H5JWZ4_9PHAE3.600e-4965.16CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ec... [more]
A0A6V1PCP5_HETAK1.560e-1753.25Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2G0X5_9STRA2.760e-1545.57Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2UXP1_9STRA9.940e-1548.05Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0Y9H8_AURAN5.370e-1445.45CBFD_NFYB_HMF domain-containing protein (Fragment)... [more]
A0A7S3JZM4_9STRA1.780e-1239.51Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
W7TNB3_9STRA3.240e-1239.24Histone-like transcription factor family protein n... [more]
A0A7S2RT01_9STRA1.460e-1141.25Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0ZTN1_DICPU4.650e-937.66CBFD_NFYB_HMF domain-containing protein n=1 Tax=Di... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 144..203
e-value: 1.0E-15
score: 57.7
IPR009072Histone-foldGENE3D1.10.20.10coord: 121..220
e-value: 4.4E-18
score: 67.6
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 142..203
NoneNo IPR availablePANTHERPTHR10252:SF93DNA POLYMERASE EPSILON SUBUNIT Ccoord: 39..220
NoneNo IPR availablePANTHERPTHR10252HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATEDcoord: 39..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1166contigEcto-sp13_S_contig1166:3154..6032 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1166.1440.1mRNA_Ecto-sp13_S_contig1166.1440.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1166 2156..6073 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1166.1440.1 ID=prot_Ecto-sp13_S_contig1166.1440.1|Name=mRNA_Ecto-sp13_S_contig1166.1440.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=222bp
MSELNPGVPPAQQLNVEGQVPVEQHPSSHNNGSSSAPPSAATPSPPTTAA
TNTEQATSSAATPTSAAASSTTAAAASTAVGTSTAVPAAADTEARQDPVP
TAGGTRNGPGTPSAPAASGAVKKEGGSQPRSAKRPRDTPLPVGLPKSMVR
RIMKLGEETRNISNEALVIVVKASEIFLEKFAARAFDHAEKLGRKTIKYR
DVSDVRVEDPNLLFLEAVVPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003958CBFA_NFYB_domain
IPR009072Histone-fold