prot_Ecto-sp13_S_contig11486.1300.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11486.1300.1
Unique Nameprot_Ecto-sp13_S_contig11486.1300.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length322
Homology
BLAST of mRNA_Ecto-sp13_S_contig11486.1300.1 vs. uniprot
Match: D7FIC0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIC0_ECTSI)

HSP 1 Score: 498 bits (1283), Expect = 8.660e-174
Identity = 264/322 (81.99%), Postives = 271/322 (84.16%), Query Frame = 0
Query:    1 MAPKRQNAELERLRLACKVESTETITKAQEILRRMDTKCRPGTLGRGDLFRTCIAFDLACRALNCPVPQKTAVKLCGAPSEGVYVAALGTAQRLLGVQRRYTCEEIAESVGDKSAGMKAAVELKQYKERFLASYPVRQVSNIDLDGTVYAVAAFYLCAKKLKHPVDKQRLLDLSLVREDEFMAVCRSMLDLCYSTLGVSVSDKPTAERLSRFQKAAALNSENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVVRRRIPLSWGRDRLGAPGSHVTALARSIQAATQRRRHGGMTVAPLEPGGSNEA 322
            MAPKRQNAELERLRLAC V+STETITKAQEILRRMDTKCRPGTLGRGDLFRTCIAFDLACRALNCPVPQKTAVKLCGAPSE VYVAALGTAQRLLGVQRRYTC+EIAESVGDKSAGMKAAVELK+YKERFLASYPVRQVS IDLDGTVYAVAAFYLCAKKLKHPVDKQRLLDLSLVREDEFMAVCRSMLDLCYSTLGVSVSDKPTAERLSRFQKAAALN++N                                             S  RRRIPLS GR+RLGAPGSHVTALARSIQAATQR+RHGGMTVAPLEPGGSNEA
Sbjct:    1 MAPKRQNAELERLRLACNVDSTETITKAQEILRRMDTKCRPGTLGRGDLFRTCIAFDLACRALNCPVPQKTAVKLCGAPSESVYVAALGTAQRLLGVQRRYTCKEIAESVGDKSAGMKAAVELKRYKERFLASYPVRQVSGIDLDGTVYAVAAFYLCAKKLKHPVDKQRLLDLSLVREDEFMAVCRSMLDLCYSTLGVSVSDKPTAERLSRFQKAAALNNKNNGSSSAPSGVKDEQRPQGSAAQGPARSATLASSGPQRRNGGGFAASGNRRRIPLSGGRERLGAPGSHVTALARSIQAATQRKRHGGMTVAPLEPGGSNEA 322          
BLAST of mRNA_Ecto-sp13_S_contig11486.1300.1 vs. uniprot
Match: A0A6H5J8P6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8P6_9PHAE)

HSP 1 Score: 482 bits (1240), Expect = 5.560e-165
Identity = 258/321 (80.37%), Postives = 264/321 (82.24%), Query Frame = 0
Query:    1 MAPKRQNAELERLRLACKVESTETITKAQEILRRMDTKCRPGTLGRGDLFRTCIAFDLACRALNCPVPQKTAVKLCGAPSEGVYVAALGTAQRLLGVQRRYTCEEIAESVGDKSAGMKAAVELKQYKERFLASYPVRQVSNIDLDGTVYAVAAFYLCAKKLKHPVDKQRLLDLSLVREDEFMAVCRSMLDLCYSTLGVSVSDKPTAERLSRFQKAAALNSENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVVRRRIPLSWGRDRLGAPGSHVTALARSIQAATQRRRHGGMTVAPLEPGGSNE 321
            M PKRQNAELERLRLAC VESTETITKAQEILRRM+TKCRPGTLGRGDLFRTCIAFDLACRALNCPVP KTAVKLCGAPSEGVYVAALGTAQRLLGVQRRYTC EIAESVGDKSAGMKAA ELK+YKERFLASYPVRQVS+IDLDGTVYAVAAFYLCAKKLKHPVDKQRLLDLSLVREDEFMAVCRSMLDLCYSTLGVSVSDKPTAERLSRFQKAAALNS+N                                             S  RRRIPLS  RDRLGA GSHVTALARSIQAATQR+R GGMTVA LEPGG+NE
Sbjct:    1 MEPKRQNAELERLRLACNVESTETITKAQEILRRMNTKCRPGTLGRGDLFRTCIAFDLACRALNCPVPHKTAVKLCGAPSEGVYVAALGTAQRLLGVQRRYTCREIAESVGDKSAGMKAAEELKRYKERFLASYPVRQVSSIDLDGTVYAVAAFYLCAKKLKHPVDKQRLLDLSLVREDEFMAVCRSMLDLCYSTLGVSVSDKPTAERLSRFQKAAALNSKNNGSSSAPSGVKDEQRPPESAAQGPARSANAASTGPQRRNGGGFAASGARRRIPLSGERDRLGATGSHVTALARSIQAATQRKRRGGMTVALLEPGGNNE 321          
BLAST of mRNA_Ecto-sp13_S_contig11486.1300.1 vs. uniprot
Match: A0A251T036_HELAN (Putative origin recognition complex protein 6 n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251T036_HELAN)

HSP 1 Score: 105 bits (261), Expect = 1.220e-22
Identity = 64/193 (33.16%), Postives = 101/193 (52.33%), Query Frame = 0
Query:   20 ESTETITKAQEILRRMDTKCRPGTLGRGDLFRTCIAFDLACRALNCPVPQKTAVKLCGAPSEGVYVAALGTAQRLLGVQRRYTCEEIAESVGDKSAGMKAAVELKQYKERFLASYPVRQVSNIDLDGTVYAVAAFYLCAKKLKHPVDKQRLLDLSLVREDEFMAVCRSMLDLCYSTLGVSVSDK-PTAERLSR 211
            ES + + KA E+ R  D +    + G G++ ++ I  ++A   +     ++TA++L G  SE  Y+ +    Q  +G++ +    E+A   G           L  YKERF+AS P  + ++ D    V+    FYLCAKK K  VDK +L++LS   EDEF +V  SM DLC+   GVS   K P + +++R
Sbjct:   14 ESKQVVRKAAELRRVSDLQFDSSSAGIGEICKSIICLEIAANMMQVIFDRQTAIRLSGM-SEKAYIRSFNVMQNGIGIKNKLDIRELAIQFGCVRLIPLVQKGLSLYKERFIASLPPSRRASADFTRPVFTATGFYLCAKKHKLKVDKNKLIELSGTSEDEFSSVSTSMKDLCHDVFGVSKEKKDPKSVKVNR 205          
BLAST of mRNA_Ecto-sp13_S_contig11486.1300.1 vs. uniprot
Match: UPI00053C0C37 (origin of replication complex subunit 6 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C0C37)

HSP 1 Score: 103 bits (257), Expect = 4.670e-22
Identity = 63/183 (34.43%), Postives = 90/183 (49.18%), Query Frame = 0
Query:   25 ITKAQEILRRMDTKCRPGTLGRGDLFRTCIAFDLACRALNCPVPQKTAVKLCGAPSEGVYVAALGTAQRLLGVQRRYTCEEIAESVGDKSAGMKAAVELKQYKERFLASYPVRQVSNIDLDGTVYAVAAFYLCAKKLKHPVDKQRLLDLSLVREDEFMAVCRSMLDLCYSTLGVSVSDKPTAE 207
            + KA E+ R  D +     +G G++ ++ I  ++A   L     ++ A+KL G  SE  Y  +  T Q  +G++ +    E+A   G           L  YKERF+ S P  + +N D    V+  AAFYLCAKK K  VDK RL+++    E EF  V  SM DLCY   GVS   +   E
Sbjct:   19 VRKAAELRRLCDVQFDSSIIGVGEICKSVICLEIAASRLQVIFDRQAAIKLSGM-SEKAYTRSFNTLQNGIGLKIKLDVRELAIQFGCVRIVRTVREALSLYKERFITSLPASRRANADFTRPVFTAAAFYLCAKKQKLKVDKNRLIEVCGTSESEFSCVSTSMKDLCYDCFGVSKEKRDPKE 200          
BLAST of mRNA_Ecto-sp13_S_contig11486.1300.1 vs. uniprot
Match: A0A118K386_CYNCS (Origin recognition complex, subunit 6 n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A118K386_CYNCS)

HSP 1 Score: 102 bits (253), Expect = 1.720e-21
Identity = 64/193 (33.16%), Postives = 97/193 (50.26%), Query Frame = 0
Query:   20 ESTETITKAQEILRRMDTKCRPGTLGRGDLFRTCIAFDLACRALNCPVPQKTAVKLCGAPSEGVYVAALGTAQRLLGVQRRYTCEEIAESVGDKSAGMKAAVELKQYKERFLASYPVRQVSNIDLDGTVYAVAAFYLCAKKLKHPVDKQRLLDLSLVREDEFMAVCRSMLDLCYSTLGVSVSDK-PTAERLSR 211
            E  + + KA E+ R  D +      G G++ +  I  ++A         ++TA++L G  SE  Y+ +    Q  +GV+ R    E+A   G           L  Y+ERF+AS P  + ++ D    V+    FYLCAKK K  VDK +L++LS   EDEF +V  SM DLC+   GVS   K P + +++R
Sbjct:   14 ELKQVVRKAAELRRMSDLQFDSSNAGIGEVCKAVICLEIAANMKQVLFDRQTAIRLSGM-SEKAYIRSFNVMQNGIGVKNRLDIRELAIQFGCVRLIPLVQKGLSLYRERFIASLPASRRASADCSRPVFTATGFYLCAKKHKLKVDKNKLIELSGTSEDEFSSVSTSMKDLCHDVFGVSKEKKDPKSMKVNR 205          
BLAST of mRNA_Ecto-sp13_S_contig11486.1300.1 vs. uniprot
Match: A0A251U2C8_HELAN (Putative origin recognition complex, subunit 6 n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251U2C8_HELAN)

HSP 1 Score: 100 bits (250), Expect = 4.420e-21
Identity = 64/193 (33.16%), Postives = 99/193 (51.30%), Query Frame = 0
Query:   20 ESTETITKAQEILRRMDTKCRPGTLGRGDLFRTCIAFDLACRALNCPVPQKTAVKLCGAPSEGVYVAALGTAQRLLGVQRRYTCEEIAESVGDKSAGMKAAVELKQYKERFLASYPVRQVSNIDLDGTVYAVAAFYLCAKKLKHPVDKQRLLDLSLVREDEFMAVCRSMLDLCYSTLGVSVSDK-PTAERLSR 211
            E  + + KA E+ R  D +    + G G++ +  I  ++A         ++TA++L G  SE  Y+ +    Q  +GV+     +E+A   G           L  YKERF+AS P  + ++ D    V+  A FYLCAKK K  VDK +L++LS   EDEF +V  SM DLC+   GV+   K P + +++R
Sbjct:   14 EPKQIVRKAAELRRMSDLQFDSSSAGIGEICKAIICLEIAANMKQVLFDRQTAIRLSGM-SEKAYIRSFNVMQNGIGVKNTLDVKELAIQFGCVRLIPLVKKCLSLYKERFIASLPPSRRASADFTRPVFTAAGFYLCAKKHKLKVDKNKLIELSGTSEDEFSSVSTSMKDLCHDVFGVAKEKKDPKSVKVNR 205          
BLAST of mRNA_Ecto-sp13_S_contig11486.1300.1 vs. uniprot
Match: A0A0K9P9W0_ZOSMR (Origin recognition complex subunit 6 n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9P9W0_ZOSMR)

HSP 1 Score: 95.9 bits (237), Expect = 3.310e-19
Identity = 58/187 (31.02%), Postives = 91/187 (48.66%), Query Frame = 0
Query:   21 STETITKAQEILRRMDTKCRPGTLGRGDLFRTCIAFDLACRALNCPVPQKTAVKLCGAPSEGVYVAALGTAQRLLGVQRRYTCEEIAESVGDKSAGMKAAVELKQYKERFLASYPVRQVSNIDLDGTVYAVAAFYLCAKKLKHPVDKQRLLDLSLVREDEFMAVCRSMLDLCYSTLGVSVSDKPTAE 207
            S + I KA+E+ RR D +    ++G G++ +  I  ++A    +    +K AVK  G  SE  Y+      Q  LGV+ R    E+    G           +  YK RF+ + P  + ++ D +  V+   AFYLCAK+ K  VDK +L++L    E EF  V  SM DLC+   G++   K + +
Sbjct:   15 SKQLIRKAEELQRRSDLQFHSSSIGVGEVCKAIICLEIAASGFHMIFDRKMAVKFSGM-SEKAYIRCFNGLQSSLGVKTRLDVRELGIQFGCVRLIPLVHKGISLYKTRFIEALPPSRRASTDFNRPVFTAVAFYLCAKRHKLKVDKNKLIELCGTSESEFACVATSMKDLCFDLFGIAKEKKDSKD 200          
BLAST of mRNA_Ecto-sp13_S_contig11486.1300.1 vs. uniprot
Match: UPI001923CA2F (origin of replication complex subunit 6-like isoform X3 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=UPI001923CA2F)

HSP 1 Score: 66.6 bits (161), Expect = 6.000e-9
Identity = 52/180 (28.89%), Postives = 81/180 (45.00%), Query Frame = 0
Query:   25 ITKAQEILRRMDTKCRPGTLGRGDLFRTCIAFDLAC-RALNCPVPQKTAVKLCGAPSEGVYVAALGTAQRLLGVQRRYTCEEIAESVGDKSAGMKAAVELKQYKERFLASYPVRQVSNIDLDGTVYAVAAFYLCAKKLKHPVDKQRLLDLSLVREDEFMAVCRSMLDLCYSTLGVSVSDK 203
            + KA E+ R  D +     +G G++ +  I  ++A  R       ++ AVKL G  SE  Y  +  + Q  L ++      E+    G         V L  + ++ L+       ++ D    V+   AFYLCAKK K  +DK RL+++    E EF  V  SM DLC+   G+S   K
Sbjct:   19 VRKAAELRRLCDVQFDSSIIGVGEVCKAVICLEIAATRFGEVLFDRQKAVKLSGM-SEKAYNRSFNSLQNGLNIKTTLDIRELGIQFG--------CVRLIPFVKKGLSLQ-----ASADFTRPVFTAVAFYLCAKKHKLKIDKDRLIEVCGTSESEFSCVSTSMKDLCHDVFGISNEKK 184          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11486.1300.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FIC0_ECTSI8.660e-17481.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8P6_9PHAE5.560e-16580.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A251T036_HELAN1.220e-2233.16Putative origin recognition complex protein 6 n=1 ... [more]
UPI00053C0C374.670e-2234.43origin of replication complex subunit 6 n=1 Tax=Ta... [more]
A0A118K386_CYNCS1.720e-2133.16Origin recognition complex, subunit 6 n=1 Tax=Cyna... [more]
A0A251U2C8_HELAN4.420e-2133.16Putative origin recognition complex, subunit 6 n=1... [more]
A0A0K9P9W0_ZOSMR3.310e-1931.02Origin recognition complex subunit 6 n=1 Tax=Zoste... [more]
UPI001923CA2F6.000e-928.89origin of replication complex subunit 6-like isofo... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 100..194
e-value: 1.8E-11
score: 46.2
NoneNo IPR availablePRODOMPD315657coord: 25..159
e-value: 5.0E-12
score: 173.0
IPR020529Origin recognition complex, subunit 6, metazoa/plantPANTHERPTHR13394ORIGIN RECOGNITION COMPLEX SUBUNIT 6coord: 12..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11486contigEcto-sp13_S_contig11486:1..5186 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11486.1300.1mRNA_Ecto-sp13_S_contig11486.1300.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11486 1..5186 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11486.1300.1 ID=prot_Ecto-sp13_S_contig11486.1300.1|Name=mRNA_Ecto-sp13_S_contig11486.1300.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=322bp
MAPKRQNAELERLRLACKVESTETITKAQEILRRMDTKCRPGTLGRGDLF
RTCIAFDLACRALNCPVPQKTAVKLCGAPSEGVYVAALGTAQRLLGVQRR
YTCEEIAESVGDKSAGMKAAVELKQYKERFLASYPVRQVSNIDLDGTVYA
VAAFYLCAKKLKHPVDKQRLLDLSLVREDEFMAVCRSMLDLCYSTLGVSV
SDKPTAERLSRFQKAAALNSENNGGSSAPSDVKDEQRPPGSAAQGPARSA
TAASSGPQRQNGGGFAASVVRRRIPLSWGRDRLGAPGSHVTALARSIQAA
TQRRRHGGMTVAPLEPGGSNEA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020529ORC6_met/pln