prot_Ecto-sp13_S_contig11282.1143.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11282.1143.1
Unique Nameprot_Ecto-sp13_S_contig11282.1143.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length470
Homology
BLAST of mRNA_Ecto-sp13_S_contig11282.1143.1 vs. uniprot
Match: D7G9B2_ECTSI (Magnesium and cobalt transport protein CorA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B2_ECTSI)

HSP 1 Score: 782 bits (2020), Expect = 9.680e-280
Identity = 423/462 (91.56%), Postives = 437/462 (94.59%), Query Frame = 0
Query:    9 SGGEGGPQRIPQSLWDVWRKRRGTGSFDGALGRQSSDDSGGSSGSHGRTGLGFDPGSTVGGAGXXXGTPPGKVPELVRVALFDPDYDTSRQHLVKLFNALDTNGSGTITYEAMRMGLANLGTYSDVNYLMRRAEMDKTKEISLDGFVDIVQDYAEKVFAANQEVPVSCFCYDYSPEEVAFRWVKTGNPNPPSPSVSLRQLMAERDDQKGDVRWVCVTGSDPSLVIHMANRFGIHPLQVEDCLNPRERLKVDAFRATPVKPSRVPSATYKSQAPAKGTKGGTNDEPKVSTTLGGSTEVPVPASTSPAVAATPPTXXXXXXXXXXXXSAAEAAAELEASAAMRNELLPSSTSMLSEAADQSEGVPPRHPPARPEAGRISPVKIAKLSHGADPHTGGTVAGAGPAARGEIGAGSGDGGDVSALTPNDNGGDPAAPAEEILHVVLGRISLREPTLGRPSNFEREQV 470
            +GGEG PQRIP SLWD+WRKRRGTGSFDGALGRQSSDDSGGSSGS+GR GLGFDPGS+VGGAGXXX   PGKVPELVRVALFDPDYDTSRQHLVKLF+ALDTNGSGTITYEAMRMGLANLGTYSDVNYLM+RAEMDKTKEISLDGFVDIVQDYAEKVFAANQEVPVSCFCYDYSPEEVAFRWVKTG+PNPPSPSVSLR+LMAERDDQKGDVRWVCVTGSDPSLVIHMANRFGIHPLQVEDCLNPRERLKVDAF+ATPVKPSR+PSATYK QAPAKGTKG TNDEP VSTT+GGSTEVP+PASTSPAVA     XXXXXXXXXXX SAAEAAAELEASAAMRNELLPSSTSMLS AADQSEG PPRHPPARPEAGR+SPVKIA LSHGADP TGG VAGAG AARGEIGAGSGDGGDV  LTPND+G DP APAEEILHVVLGRISLREPTLGRPSNFEREQV
Sbjct:    2 TGGEGAPQRIPPSLWDIWRKRRGTGSFDGALGRQSSDDSGGSSGSYGRAGLGFDPGSSVGGAGXXXXASPGKVPELVRVALFDPDYDTSRQHLVKLFDALDTNGSGTITYEAMRMGLANLGTYSDVNYLMQRAEMDKTKEISLDGFVDIVQDYAEKVFAANQEVPVSCFCYDYSPEEVAFRWVKTGDPNPPSPSVSLRRLMAERDDQKGDVRWVCVTGSDPSLVIHMANRFGIHPLQVEDCLNPRERLKVDAFQATPVKPSRIPSATYKFQAPAKGTKGSTNDEPTVSTTMGGSTEVPMPASTSPAVATAXXXXXXXXXXXXXXDSAAEAAAELEASAAMRNELLPSSTSMLSGAADQSEGAPPRHPPARPEAGRVSPVKIANLSHGADPDTGGNVAGAGSAARGEIGAGSGDGGDVPTLTPNDDGDDPGAPAEEILHVVLGRISLREPTLGRPSNFEREQV 463          
BLAST of mRNA_Ecto-sp13_S_contig11282.1143.1 vs. uniprot
Match: A0A6H5L3P2_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3P2_9PHAE)

HSP 1 Score: 788 bits (2036), Expect = 3.880e-279
Identity = 420/470 (89.36%), Postives = 436/470 (92.77%), Query Frame = 0
Query:    1 LTSALSSSSGGEGGPQRIPQSLWDVWRKRRGTGSFDGALGRQSSDDSGGSSGSHGRTGLGFDPGSTVGGAGXXXGTPPGKVPELVRVALFDPDYDTSRQHLVKLFNALDTNGSGTITYEAMRMGLANLGTYSDVNYLMRRAEMDKTKEISLDGFVDIVQDYAEKVFAANQEVPVSCFCYDYSPEEVAFRWVKTGNPNPPSPSVSLRQLMAERDDQKGDVRWVCVTGSDPSLVIHMANRFGIHPLQVEDCLNPRERLKVDAFRATPVKPSRVPSATYKSQAPAKGTKGGTNDEPKVSTTLGGSTEVPVPASTSPAVAATPPTXXXXXXXXXXXXSAAEAAAELEASAAMRNELLPSSTSMLSEAADQSEGVPPRHPPARPEAGRISPVKIAKLSHGADPHTGGTVAGAGPAARGEIGAGSGDGGDVSALTPNDNGGDPAAPAEEILHVVLGRISLREPTLGRPSNFEREQV 470
            + SA SS  GGEGGPQRIPQSLWDVWRKRRGTGSFDGA+GRQSSD+SGGSSGS+GR GLGFDPGS +GGAG   GTPPGKVPELVRVALFDPDYDTSRQHLVKLFNALDTNGSGTITYEAMRMGLANLGTYSDVNY+MRRAEMDKTKEISLDGFVDIVQD AEKVFAANQEVPVSCFCYDYSPEEVAFRWV TG+PNPPSPSVSLR+LMAERDDQKGDVRWVCVTGSDPSLVIHMANRFGIHPLQVEDCLNPRERLKVDAFRATPVKPSR+PSATYK QAPAKGTKG TNDEP  STT+GGSTEVP+PASTSPAVA     XXXXXX      SAAEA+AELE+S AMRNELLPSSTSM  EAADQSEGVPPRHPPA PEAGR+SPVKIAKL HGADP TGGTVAGAG AARGEIGAGSGDGGDVSALT +D+GGDPAAPAEEILHVVLGRISLREPTLGRPSNFEREQV
Sbjct:  196 VASASSSIPGGEGGPQRIPQSLWDVWRKRRGTGSFDGAVGRQSSDESGGSSGSYGRAGLGFDPGSNIGGAGGGGGTPPGKVPELVRVALFDPDYDTSRQHLVKLFNALDTNGSGTITYEAMRMGLANLGTYSDVNYVMRRAEMDKTKEISLDGFVDIVQDCAEKVFAANQEVPVSCFCYDYSPEEVAFRWVNTGDPNPPSPSVSLRELMAERDDQKGDVRWVCVTGSDPSLVIHMANRFGIHPLQVEDCLNPRERLKVDAFRATPVKPSRIPSATYKFQAPAKGTKGSTNDEPTFSTTMGGSTEVPMPASTSPAVAXXXXXXXXXXXATETVDSAAEASAELESSTAMRNELLPSSTSMSFEAADQSEGVPPRHPPASPEAGRVSPVKIAKLPHGADPDTGGTVAGAGSAARGEIGAGSGDGGDVSALTLDDDGGDPAAPAEEILHVVLGRISLREPTLGRPSNFEREQV 665          
BLAST of mRNA_Ecto-sp13_S_contig11282.1143.1 vs. uniprot
Match: A0A835YKG6_9STRA (Cora-like Mg2+ transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKG6_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.570e-18
Identity = 76/238 (31.93%), Postives = 113/238 (47.48%), Query Frame = 0
Query:   90 FDPDYDTSRQHLVKLFNALDTNGSGTITYEAMRMGLANL-----------------GTYS--------------------DVNYLMRRAEMDKTKE-ISLDGFVDIVQDYAEKVFAANQEVPVSCFCYDYSPEEVAFRWVKTGN------------PNPPSPS----------------VSLRQLMAE-RDDQKGDVRWVCVTGSDPSLVIHMANRFGIHPLQVEDCLNPR-ERLKVD 259
            FDPDYDTS +HL KLF+ LD N +G+++ + +RMGLA +                 G Y+                     +  L    + DK++  I+   FVD V++ A +++ +N++V    F  DYSP  +    ++T              P  P PS                +SL + + E R      VRW+ +TG +PSLVI +A+++ IHPLQVED L+P  ERLKVD
Sbjct:  186 FDPDYDTSPEHLEKLFDLLDKNKNGSLSVDEVRMGLAGMRPALYPCRWPPGAHVHGGAYTCCAALSITVSSPPLPPPPSLPLLPLQSFLKGDKSQGLITRQVFVDTVRENAARMYRSNKDVNPEMFVCDYSPHSLTQCRIETNRAAVLSPRRASAAPAAPPPSLPPSARSSFRSGDSPVISLEEFLREPRLPGASKVRWIGITGMEPSLVIRLAHKYDIHPLQVEDALSPSTERLKVD 423          
BLAST of mRNA_Ecto-sp13_S_contig11282.1143.1 vs. uniprot
Match: A0A0D2VNK3_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VNK3_CAPO3)

HSP 1 Score: 82.0 bits (201), Expect = 8.130e-13
Identity = 64/212 (30.19%), Postives = 97/212 (45.75%), Query Frame = 0
Query:   91 DPDYDTSRQHLVKLFNALDTNGSGTITYEAMRMGL---ANLGTYSDVNYLMRRAEMDKTKE-ISLDGFVDIVQDYAEKVF------AANQEVPVSCFCYDYSPEEVAFRWV----KTGNPNPPS-----------PSVSLRQLMAERDD-QKGD-----------------VRWVCVTGSDPSLVIHMANRFGIHPLQVEDCLNPRERLKVD 259
            DPD+D S  HL+KLFNALD +  G +    +   L   A  G  S    +M    M K +E ++ + FV  +Q+    +       A   +V +  FCYDY P +   RWV    +    +PP+           PS+         +D Q+G                  VRW+ + G+D S +I ++N + +HPLQ+ED LN +ER KV+
Sbjct:  399 DPDFDLSVPHLLKLFNALDADKDGEVALSRILSSLEPLARAGARSPRQLVMH---MFKGQESVTQEQFVLAMQEIGVMLLSRTTGVAVQDQVMLDMFCYDYGPSQAICRWVSPDPRMSMSSPPNCIGEVHEPATDPSMPTSGSANSLNDIQEGTITLSHFLRRTVPHQSLPVRWINMVGNDASTIIRVSNAYKLHPLQIEDMLNTKERPKVE 607          
BLAST of mRNA_Ecto-sp13_S_contig11282.1143.1 vs. uniprot
Match: A0A4D9CQ61_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQ61_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 4.020e-11
Identity = 51/163 (31.29%), Postives = 83/163 (50.92%), Query Frame = 0
Query:   91 DPDYDTSRQHLVKLFNALDTNGSGTITYEAMRMGLANL-GTYS----DVNYLMRRAEMDKTKEISLDGFVDIVQDYAEKVFAANQEVPVSCFC-YDYSPEEVAFRWVKTGNPNPPSPS-----VSLRQLMAE--RDDQKGDVRWVCVTGSDPSLVIHMANRFG 240
            +PD+D S  HL+KLF  +D +G+G +T++ +   L ++ G  S     ++ L  R + D ++ +S D F+ + Q  A K  A      +  F  YDY P+    R +     +P          SL +   E   D + G VRW+ VTG +PS+V+ +ANR+G
Sbjct:  223 NPDFDVSATHLLKLFAMMDKDGNGVLTHDELYESLLSMPGLQSLPREKLDELFERMDEDGSQGVSQDEFISMFQHIATKALARKGPGRLQEFTVYDYGPDYALCRRIYAKGRHPQDVDKNQVEFSLDEFFEEPIEDVRDGHVRWIAVTGIEPSVVMRLANRWG 385          
BLAST of mRNA_Ecto-sp13_S_contig11282.1143.1 vs. uniprot
Match: I2CPD3_NANGC (Magnesium and cobalt transport protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPD3_NANGC)

HSP 1 Score: 65.1 bits (157), Expect = 9.600e-8
Identity = 41/120 (34.17%), Postives = 63/120 (52.50%), Query Frame = 0
Query:  149 ISLDGFVDIVQDYAEKVFAANQEVPVSCFC-YDYSPEEVAFRWVKTGNPNPPSPS-----VSLRQLMAE--RDDQKGDVRWVCVTGSDPSLVIHMANRFGIHPLQVEDCLNP-RERLKVD 259
            +S D F+ + Q  A K  A      +  F  YDY P+    R + T   +P          SL +   E   D + G VRW+ VTG +PS+V+ +ANR+ +HP+QV++ LN  ++R+K D
Sbjct:    5 VSQDEFISMFQHIATKALARKGPGRLQEFTVYDYGPDYALCRRIYTKGRDPQDVDKNQVEFSLDEFFEEPIEDVRDGHVRWIAVTGIEPSVVMRLANRYRLHPVQVDEVLNSNKQRMKAD 124          
BLAST of mRNA_Ecto-sp13_S_contig11282.1143.1 vs. uniprot
Match: H3GJE9_PHYRM (EF-hand domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJE9_PHYRM)

HSP 1 Score: 65.1 bits (157), Expect = 1.610e-7
Identity = 56/201 (27.86%), Postives = 93/201 (46.27%), Query Frame = 0
Query:   79 GKVPELVRVALFDPDYDTSRQHLVKLFNALDTNGSGTITYEAMRMGLANLGTYSD----VNYLMRRAEMDKTKEISLDGFVDIVQDYA-EKVFAANQEVPVSCFCYDYSPEEVAFRWVKTGNPNPPSPSVS---LRQLMAERDDQK---------GDVRWVCVTGSDPSLVIHMANRFGIHPLQVEDCLNPR-ERLKVDAF 261
            G V E   ++L DP YD +   ++KLF+  +    G ++YE  R GL  +G   D        + + + DK+  ++   F+  +Q+    ++F  N++     F  D  PE    +  +TG+    S   S   +R +      QK           VRWV V G DP L+  ++ R+ +HPL +ED L+P  ER K + +
Sbjct:  151 GLVDEADDLSLMDPHYDLTSAKMMKLFSLFNPGDDGMVSYEGFRCGLEAMGIGCDDDEQFQTFIDKVDDDKSGGVTYQEFLFAIQEIKLAQLF--NED-----FLRDMPPEYTHLKRGRTGHALLGSIEYSSDRIRSVYPIDQVQKFIYSAKPGWASVRWVSVEGIDPLLMRRLSVRYRLHPLAIEDTLDPDVERPKYEEY 344          
BLAST of mRNA_Ecto-sp13_S_contig11282.1143.1 vs. uniprot
Match: A0A0L0FC12_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FC12_9EUKA)

HSP 1 Score: 62.8 bits (151), Expect = 6.620e-7
Identity = 34/97 (35.05%), Postives = 52/97 (53.61%), Query Frame = 0
Query:   92 PDYDTSRQHLVKLFNALDTNGSGTITYEAMRMGLANLGTYSDV-----NYLMRRAEMDKTKEISLDGFVDIVQDYAEKVFAANQEVPVSCFCYDYSP 183
            PD+D S +HL +LFN LDTNG G +TY  M++G  ++  + D+     + L+   + D +  +SL  FV  + +YA    A   E     F +DY P
Sbjct:   68 PDFDVSVKHLEQLFNVLDTNGDGELTYAQMKLGFESMNAFPDLETEQLDKLIVEIDTDNSGTVSLTEFVVSMHEYA--ALALGDEAVFVVFVHDYGP 162          
BLAST of mRNA_Ecto-sp13_S_contig11282.1143.1 vs. uniprot
Match: A0A835Z9I1_9STRA (Cora-like Mg2+ transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9I1_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.330e-5
Identity = 27/42 (64.29%), Postives = 35/42 (83.33%), Query Frame = 0
Query:  219 VRWVCVTGSDPSLVIHMANRFGIHPLQVEDCLNPR-ERLKVD 259
            VRW+ VTG +PSLVI +A+++ +HPLQ+ED LNP  ERLKVD
Sbjct:  370 VRWIGVTGVEPSLVIRLAHKYNLHPLQMEDALNPSTERLKVD 411          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11282.1143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G9B2_ECTSI9.680e-28091.56Magnesium and cobalt transport protein CorA n=1 Ta... [more]
A0A6H5L3P2_9PHAE3.880e-27989.36EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YKG6_9STRA2.570e-1831.93Cora-like Mg2+ transporter protein-domain-containi... [more]
A0A0D2VNK3_CAPO38.130e-1330.19Uncharacterized protein n=1 Tax=Capsaspora owczarz... [more]
A0A4D9CQ61_9STRA4.020e-1131.29Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
I2CPD3_NANGC9.600e-834.17Magnesium and cobalt transport protein (Fragment) ... [more]
H3GJE9_PHYRM1.610e-727.86EF-hand domain-containing protein n=1 Tax=Phytopht... [more]
A0A0L0FC12_9EUKA6.620e-735.05Uncharacterized protein (Fragment) n=1 Tax=Sphaero... [more]
A0A835Z9I1_9STRA1.330e-564.29Cora-like Mg2+ transporter protein-domain-containi... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 100..128
e-value: 0.0081
score: 25.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 96..131
score: 12.226
NoneNo IPR availableGENE3D1.10.238.10coord: 96..173
e-value: 3.1E-10
score: 41.9
NoneNo IPR availableGENE3D3.30.460.20coord: 174..266
e-value: 1.9E-9
score: 39.3
NoneNo IPR availablePANTHERPTHR46494:SF1coord: 92..261
NoneNo IPR availablePANTHERPTHR46494FAMILY NOT NAMEDcoord: 92..261
NoneNo IPR availableSUPERFAMILY143865CorA soluble domain-likecoord: 198..262
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 97..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11282contigEcto-sp13_S_contig11282:576..5322 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11282.1143.1mRNA_Ecto-sp13_S_contig11282.1143.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11282 576..5322 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11282.1143.1 ID=prot_Ecto-sp13_S_contig11282.1143.1|Name=mRNA_Ecto-sp13_S_contig11282.1143.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=470bp
LTSALSSSSGGEGGPQRIPQSLWDVWRKRRGTGSFDGALGRQSSDDSGGS
SGSHGRTGLGFDPGSTVGGAGGGGGTPPGKVPELVRVALFDPDYDTSRQH
LVKLFNALDTNGSGTITYEAMRMGLANLGTYSDVNYLMRRAEMDKTKEIS
LDGFVDIVQDYAEKVFAANQEVPVSCFCYDYSPEEVAFRWVKTGNPNPPS
PSVSLRQLMAERDDQKGDVRWVCVTGSDPSLVIHMANRFGIHPLQVEDCL
NPRERLKVDAFRATPVKPSRVPSATYKSQAPAKGTKGGTNDEPKVSTTLG
GSTEVPVPASTSPAVAATPPTTITTTTATETVDSAAEAAAELEASAAMRN
ELLPSSTSMLSEAADQSEGVPPRHPPARPEAGRISPVKIAKLSHGADPHT
GGTVAGAGPAARGEIGAGSGDGGDVSALTPNDNGGDPAAPAEEILHVVLG
RISLREPTLGRPSNFEREQV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair