prot_Ecto-sp13_S_contig11231.1094.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11231.1094.1
Unique Nameprot_Ecto-sp13_S_contig11231.1094.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length111
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11231.1094.1 vs. uniprot
Match: D7G3C3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C3_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 3.840e-23
Identity = 95/110 (86.36%), Postives = 96/110 (87.27%), Query Frame = 0 
Query:    2 PVFLMSQSFGYDTETEKTIERVCLEQGLVREVVWDELHLAPTTLATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLV-SRPLRAGTKLQRFWRA 110
            PVFLMSQSFGYD ETEKTIER C+EQGLVREVVWDELHLAPTT    XXXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXLLV SRPLRAGTKLQRFWRA
Sbjct:  356 PVFLMSQSFGYDPETEKTIERACVEQGLVREVVWDELHLAPTTPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEHPSPXXXXXXXXXXLLVVSRPLRAGTKLQRFWRA 465
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BLAST of mRNA_Ecto-sp13_S_contig11231.1094.1 vs. uniprot
Match: A0A6H5KXF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXF9_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 1.230e-22
Identity = 94/110 (85.45%), Postives = 95/110 (86.36%), Query Frame = 0 
Query:    2 PVFLMSQSFGYDTETEKTIERVCLEQGLVREVVWDELHLAPTT-LATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLVSRPLRAGTKLQRFWRA 110
            PVFLMSQSFGYD ETEK+IER CLEQGLVREVVWDELHLAPTT     XXXXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXX LLVSRPLRAGTKLQRFW A
Sbjct:  336 PVFLMSQSFGYDAETEKSIERACLEQGLVREVVWDELHLAPTTPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEHPSXXXXXXXXXXXLLLVSRPLRAGTKLQRFWHA 445
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11231.1094.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3C3_ECTSI3.840e-2386.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXF9_9PHAE1.230e-2285.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11231contigEcto-sp13_S_contig11231:455..787 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11231.1094.1mRNA_Ecto-sp13_S_contig11231.1094.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11231 2..1716 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11231.1094.1 ID=prot_Ecto-sp13_S_contig11231.1094.1|Name=mRNA_Ecto-sp13_S_contig11231.1094.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=111bp
MPVFLMSQSFGYDTETEKTIERVCLEQGLVREVVWDELHLAPTTLATTQE
RQEQQEPPPPEQRQQRGADEAAAKGEHSSPARREGGGKEELLLVSRPLRA
GTKLQRFWRA*
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