prot_Ecto-sp13_S_contig1110.958.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1110.958.1
Unique Nameprot_Ecto-sp13_S_contig1110.958.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length303
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1110.958.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 248..268
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 274..293
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 177..200
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 201..219
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 242..247
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 220..241
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 269..273
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 294..303
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..176
NoneNo IPR availableTMHMMTMhelixcoord: 246..268
NoneNo IPR availableTMHMMTMhelixcoord: 209..231
NoneNo IPR availableTMHMMTMhelixcoord: 175..197
NoneNo IPR availableTMHMMTMhelixcoord: 275..297

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1110contigEcto-sp13_S_contig1110:10586..11494 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1110.958.1mRNA_Ecto-sp13_S_contig1110.958.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1110 10586..11496 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1110.958.1 ID=prot_Ecto-sp13_S_contig1110.958.1|Name=mRNA_Ecto-sp13_S_contig1110.958.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=303bp
LWARLLASVGRMAELPLNDGAFQAALMTCHEAVDLYSLLAPSDTGIFKED
KDLARLLAASRQPSPDATSTDGHVIYGRGRTWELRDMGGKDGLDVIPLSE
QGTPRHLAGAGSPDFFGEELTPCARPLAGARPRGVVLGGVMAQRSQPCEN
GEVKAPFKAVIRCETTLKLRFVLSSMVGWAMAGVALVSLIGAASLGYMVA
SASSFASIVISGSLGATTGEVGWCASLLLAGDPLGVLVSCGTVVRHRVVY
ILLARSLITTVVFISVVAEGSLEALVGLSASFPLILAALGWGTSGQFDGP
IIR
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