prot_Ecto-sp13_S_contig1108.943.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1108.943.1
Unique Nameprot_Ecto-sp13_S_contig1108.943.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length279
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1108.943.1 vs. uniprot
Match: D7G5E9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E9_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 2.290e-77
Identity = 183/207 (88.41%), Postives = 186/207 (89.86%), Query Frame = 0 
Query:    1 MPRLSLTFVTGLVALQSAAGASLRSSNGAAADGRRLQEGLCNSIGCPGGFTPIPNAWEVECGDSCDVATCCEXXXXXXXXXXXXXXXXXXGTTRCTNDDCTTEQCCVSGDDRWNKCPPQPLPSGPHGKTYCNSIGCPGGYTPIPNAWEVECDDDSCEVSQCCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGDTGDSKT 207
            MPRLSLTFVTGLVALQSAAGASLRSSNGAAADGRRLQEGLCNSIGCPGGFTPIPNAWEVECG SCDVATCCEXXXXXXXXXXXXXXXXXXGTTRCT+D CTT QCCVSG+ R  K           G  YCNSIGCPGGYTPIPNAWEVEC DDSCEVSQCCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGDTGD +T
Sbjct:    1 MPRLSLTFVTGLVALQSAAGASLRSSNGAAADGRRLQEGLCNSIGCPGGFTPIPNAWEVECGHSCDVATCCEXXXXXXXXXXXXXXXXXXGTTRCTDDYCTTPQCCVSGNTR--KGEQXXXXXXXAGGLYCNSIGCPGGYTPIPNAWEVECYDDSCEVSQCCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGDTGDGQT 205
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BLAST of mRNA_Ecto-sp13_S_contig1108.943.1 vs. uniprot
Match: A0A6H5KRN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRN6_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 4.360e-50
Identity = 98/139 (70.50%), Postives = 101/139 (72.66%), Query Frame = 0 
Query:   35 RLQEGLCNSIGCPGGFTPIPNAWEVECGDSCDVATCCEXXXXXXXXXXXXXXXXXXGTTRCTNDDCTTEQCCVSGDDRWNKCPPQPLPSGPHGKT---------YCNSIGCPGGYTPIPNAWEVECDDDSCEVSQCCEA 164
            R+ EGLCNSIGCP GFTPIP AWEVECGDSCDVATCCE  XXXXXXXXXXXXX   GTTRC ND+CTTEQCCVSG+             G              YCNSIGCPGGYTPIPNAWEVEC  DSCEVSQCCEA
Sbjct:   10 RVHEGLCNSIGCPDGFTPIPYAWEVECGDSCDVATCCEAFXXXXXXXXXXXXXEDAGTTRCNNDNCTTEQCCVSGNXXXXXXXXXXXXGGNXXXXXXXXXXXVLYCNSIGCPGGYTPIPNAWEVECSGDSCEVSQCCEA 148
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BLAST of mRNA_Ecto-sp13_S_contig1108.943.1 vs. uniprot
Match: D8LCY4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY4_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 2.090e-49
Identity = 110/135 (81.48%), Postives = 113/135 (83.70%), Query Frame = 0 
Query:    1 MPRLSLTFVTGLVALQSAAGASLRSSNGAAA-DGRRLQEGLCNSIGCPGGFTPIPNAWEVECGDSCDVATCCEXXXXXXXXXXXXXXXXXXGTTRCTNDDCTTEQCCVSGDDRWNKCPPQPLPSGPHGKTYCNSI 134
            MPRLSLTFVTGLVALQSAAGASLRSSNGAAA DGRRLQEGLCNSIGCPGG+TPIP AWEVECGDSCDVATCCE  XXXXXXXXXXXXXXXXGT RC ND+CTTEQCCVSGD +       P      G  YCNSI
Sbjct:    9 MPRLSLTFVTGLVALQSAAGASLRSSNGAAAADGRRLQEGLCNSIGCPGGYTPIPYAWEVECGDSCDVATCCEAFXXXXXXXXXXXXXXXXGTIRCNNDNCTTEQCCVSGDGQG------PXXXXXGGVLYCNSI 137
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1108.943.1 vs. uniprot
Match: A0A6H5JPS1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPS1_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 1.380e-19
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0 
Query:  127 GKTYCNSIGCPGGYTPIPNAWEVECDDDSCEVSQCCEA 164
            GKTYCNSIGCPGGYTPIPNAWEVECDDD CEVSQCCEA
Sbjct:    4 GKTYCNSIGCPGGYTPIPNAWEVECDDDPCEVSQCCEA 41
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1108.943.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G5E9_ECTSI2.290e-7788.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRN6_9PHAE4.360e-5070.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCY4_ECTSI2.090e-4981.48Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5JPS1_9PHAE1.380e-1997.37Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..278
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.722

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1108contigEcto-sp13_S_contig1108:861..4920 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1108.943.1mRNA_Ecto-sp13_S_contig1108.943.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1108 167..5624 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1108.943.1 ID=prot_Ecto-sp13_S_contig1108.943.1|Name=mRNA_Ecto-sp13_S_contig1108.943.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=279bp
MPRLSLTFVTGLVALQSAAGASLRSSNGAAADGRRLQEGLCNSIGCPGGF
TPIPNAWEVECGDSCDVATCCEAFCSYHACPDGYIPIEDAGTTRCTNDDC
TTEQCCVSGDDRWNKCPPQPLPSGPHGKTYCNSIGCPGGYTPIPNAWEVE
CDDDSCEVSQCCEAYCSYYACPDSYIPIEDAGTTRCTDDDCTAEQCCVSG
DTGDSKTYCNSIGCPGGYTPIPNAWEVECDDDSCEVSQCCEAYCSYYACP
DGHIPIEDAGTTRCTDDDCTTEQCCESH*
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