prot_Ecto-sp13_S_contig11059.928.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11059.928.1
Unique Nameprot_Ecto-sp13_S_contig11059.928.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length666
Homology
BLAST of mRNA_Ecto-sp13_S_contig11059.928.1 vs. uniprot
Match: D8LD59_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD59_ECTSI)

HSP 1 Score: 865 bits (2234), Expect = 4.220e-308
Identity = 517/662 (78.10%), Postives = 531/662 (80.21%), Query Frame = 0
Query:    1 MLAARRTYGVGRLTLGSSAVAVSRCSRLGALAHSTTTRCRSTRIGSIPQVPVARQQHFSGGSTPGAHGLPSSPNVGLGRPASGGRRPAQLARREGMTEWVRYQNMMHQRTGLARRDQLSSLREGVVGPSVNNDASSGGIATGADSSAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSESTAVIDEWSTSNSSDSRPGSDELHATTNTTARGGPGPDDGDSAASDTVQPIATTRQETSSRISSEDAVITDLDSRREATLNAELERKFGTEPPQREEISGKPRRRRSRGRGRRGAARAVEGTANELQHEPPGAASGGGGIAPAAELETGELNEVPVAEAAGPITGISGDGAKPTSGEGTPRSTGGDESRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-SGDSYSQQQGSAWKNIHAKKKLRWLLKGLASDYGVQEMLALHHISKASLLTRMSCRKHTMSKLLRVFEDLVLDRPDTAFPGEEGQKLQEKLSSLCYHPKFQADAVLMKRPIRTRTTSGRSFTFSSKQPKRGREGPFVKERNDVVEKGLIPRLVELAQESYADEIEATKRVDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGAYRQPGDGPAGLFCGPLRLLALEVYEQV 661
            MLAARRTYG+GR TL +SAVAVSRCSRLGALAH+TT RCRSTRIGS  QVP ARQQHFSGGS PGA+ L SSP VGLGR A  GRRP QLAR++G TEWVRYQNMMHQRTGLARRDQLSS+R GVVGPSVNNDA SGG+ T ADS    XXXXXXXX                          SSESTAVI                            G GPDDGD AA DTV PIATTRQETSSRISSEDAVITDLDSRREA LNAELERKFGTEPPQ EEISGK RRRRSRGRGRRGAARAVEGTANELQHEPP A SGGGGIAPAAE ETGELNEVPV EAAGPITG+SGDGAKP SGEGTPRS   DESR                     XXXXXXXXXXXXXXXXXXXX  S DSYSQQQGSAWKN+HAKKKLRWLLKGLASDYGVQEMLA HHISK           HTMSKLLRVFEDLVLD PDTAFPGE GQKLQE++SSLCYHPKFQADAVLMKRPIRTRTTSGRSFTFSSKQPKRGREGPFVKERNDVVEKGLIPRLVELAQESYADEIEATKR+DSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGA RQPGDGPAGLFCGPLRLLALEVYEQ+
Sbjct:    1 MLAARRTYGLGRSTLSTSAVAVSRCSRLGALAHATTARCRSTRIGSTRQVPAARQQHFSGGSAPGANSLSSSPGVGLGRQAGCGRRPTQLARKKGKTEWVRYQNMMHQRTGLARRDQLSSMRGGVVGPSVNNDAGSGGVETSADSXXXXXXXXXXXXSEPDVATPTAAGSSVTLSPPATMATTSSESTAVI----------------------------GLGPDDGDLAAPDTVPPIATTRQETSSRISSEDAVITDLDSRREAALNAELERKFGTEPPQLEEISGKTRRRRSRGRGRRGAARAVEGTANELQHEPPSAVSGGGGIAPAAESETGELNEVPVGEAAGPITGMSGDGAKPASGEGTPRSKSADESRRGRRNRRGGDATGDGRGGGSLXXXXXXXXXXXXXXXXXXXXXXSEDSYSQQQGSAWKNVHAKKKLRWLLKGLASDYGVQEMLARHHISK-----------HTMSKLLRVFEDLVLDHPDTAFPGEAGQKLQEEMSSLCYHPKFQADAVLMKRPIRTRTTSGRSFTFSSKQPKRGREGPFVKERNDVVEKGLIPRLVELAQESYADEIEATKRMDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGADRQPGDGPAGLFCGPLRLLALEVYEQL 623          
BLAST of mRNA_Ecto-sp13_S_contig11059.928.1 vs. uniprot
Match: A0A6H5K988_9PHAE (RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K988_9PHAE)

HSP 1 Score: 654 bits (1686), Expect = 1.130e-225
Identity = 377/426 (88.50%), Postives = 389/426 (91.31%), Query Frame = 0
Query:  239 TTRQETSSRISSEDAVITDLDSRREATLNAELERKFGTEPPQREEISGKPRRRRSRGRGRRGAARAVEGTANELQHEPPGAASGGGGIAPAAELETGELNEVPVAEAAGPITGISGDGAKPTSGEGTPRSTGGDESRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGDSYSQQQGSAWKNIHAKKKLRWLLKGLASDYGVQEMLALHHISKASLLTRMSCRK---HTMSKLLRVFEDLVLDRPDTAFPGEEGQKLQEKLSSLCYHPKFQADAVLMKRPIRTRTTSGRSFTFSSKQPKRGREGPFVKERNDVVEKGLIPRLVELAQESYADEIEATKRVDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGAYRQPGDGPAGLFCGPLRLLALEVYEQV 661
            TTRQETSS ISSEDAVITDLDSRREA LNAELERKFGTEPPQREEISGKPRRRRSRGR RRGAARAVEGTANELQHEPP AA GGGGIAPAAE ETGELNEVPV+ A GP TG+SGDGAKP SGEGTPRS   +E R               XXXXXXXXXXXXXXXXXXXXXXXXXXGSGDS+SQQQGSAWKNIHAKKKLRWLLKGLASDYGVQEMLALHH+SKAS  TR+SCR+    TMSKLLRVFEDLVLD PDTAFPGEEGQKLQE++SSLCYHPKFQADAVLMKRPIRTRTTSGRSFTFSSKQPKRGREGPFVKERNDVVEKGLIPRLVELAQESYADEIEATKR+D+IVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGA RQPGDGPAGLFCGPLRLLALEVYEQ+
Sbjct:  126 TTRQETSSCISSEDAVITDLDSRREAALNAELERKFGTEPPQREEISGKPRRRRSRGRDRRGAARAVEGTANELQHEPPAAARGGGGIAPAAESETGELNEVPVSAAVGPTTGMSGDGAKPASGEGTPRSRSAEELRRGRRNRRGGHATGDRXXXXXXXXXXXXXXXXXXXXXXXXXXGSGDSFSQQQGSAWKNIHAKKKLRWLLKGLASDYGVQEMLALHHVSKASFSTRISCRQVSVQTMSKLLRVFEDLVLDHPDTAFPGEEGQKLQEEVSSLCYHPKFQADAVLMKRPIRTRTTSGRSFTFSSKQPKRGREGPFVKERNDVVEKGLIPRLVELAQESYADEIEATKRMDNIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQPGDGPAGLFCGPLRLLALEVYEQL 551          
BLAST of mRNA_Ecto-sp13_S_contig11059.928.1 vs. uniprot
Match: A0A482SRD4_9ARCH (Helicase ATP-binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SRD4_9ARCH)

HSP 1 Score: 97.4 bits (241), Expect = 8.310e-19
Identity = 53/105 (50.48%), Postives = 63/105 (60.00%), Query Frame = 0
Query:  560 VVEKGLIPRLVELAQESYADEIEATKRVDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGAYRQPGDGPAGLFCGPLRLLALEVYEQVRRA 664
            V++  L     + A     + I   K V    DL  P Q FP ARL KR+IIYHGGPTNSGKTY AI+RLK A        G  GL+CGPLRLLALE+YE + R+
Sbjct:  119 VLKNFLFQHAYDAALHDLENVIVTNKTVCGASDLTMPHQWFPHARLMKRKIIYHGGPTNSGKTYHAIQRLKAADPT-----GGGGLYCGPLRLLALEIYETLNRS 218          
BLAST of mRNA_Ecto-sp13_S_contig11059.928.1 vs. uniprot
Match: A0A7S3HC17_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HC17_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 9.480e-19
Identity = 52/99 (52.53%), Postives = 66/99 (66.67%), Query Frame = 0
Query:  558 NDVVEKGLIPRLVELAQESYADEIEATKRVDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGAYRQPGDGPAGLFCGPLRLLALE 656
            N VVE  L+PR    A+    + IE+ + + +  DLR P + +P  RL KR+IIYHGGPTNSGKTYQA++RL +A     P  G  GL+CGPLRLLALE
Sbjct:   81 NYVVESVLLPR----AEVELKEVIESYRLLSTATDLRVPHEWYPKTRLMKRKIIYHGGPTNSGKTYQALKRLAEA----DPAKG-GGLYCGPLRLLALE 170          
BLAST of mRNA_Ecto-sp13_S_contig11059.928.1 vs. uniprot
Match: A0A2P6VC43_9CHLO (RNA helicase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VC43_9CHLO)

HSP 1 Score: 99.4 bits (246), Expect = 8.490e-18
Identity = 48/99 (48.48%), Postives = 65/99 (65.66%), Query Frame = 0
Query:  561 VEKGLIPRLVELAQESYADEIEATKRVDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGAYRQPGDGPAGLFCGPLRLLALEVYE 659
            V++ L P   +   E Y  EI+A + +   VDLRNP Q FP+AR  +RRIIYH GPTNSGKTY A++ ++ A          +G++CGPLRLLA+EVY+
Sbjct:  180 VQEALFPLFAQFVLERYTAEIKAYRDMVQTVDLRNPHQWFPMARALQRRIIYHAGPTNSGKTYNALQAMRAA---------KSGVYCGPLRLLAMEVYD 269          
BLAST of mRNA_Ecto-sp13_S_contig11059.928.1 vs. uniprot
Match: A0A2D4BGH6_PYTIN (RNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BGH6_PYTIN)

HSP 1 Score: 98.6 bits (244), Expect = 1.450e-17
Identity = 59/113 (52.21%), Postives = 72/113 (63.72%), Query Frame = 0
Query:  555 KERNDVVEKG----LIPRLVELAQES-YADEI-EATKRVDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGAYRQPGDGPAGLFCGPLRLLALEVYEQV 661
            KER  ++EK       P  +E A+E  Y     E +  +  I DLR P Q +PLA   +RRIIYH GPTNSGKTYQA+ERLK AG      DG  GL+CGPLRLLALE+YE++
Sbjct:  351 KERQQMLEKKNTFVFYPHFLEFAREKDYIPRTGEGSFTLQQITDLRLPHQLYPLANAMQRRIIYHQGPTNSGKTYQALERLKNAGE-----DG--GLYCGPLRLLALEIYERL 456          
BLAST of mRNA_Ecto-sp13_S_contig11059.928.1 vs. uniprot
Match: A0A8K1CEJ7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEJ7_PYTOL)

HSP 1 Score: 97.8 bits (242), Expect = 2.070e-17
Identity = 59/109 (54.13%), Postives = 73/109 (66.97%), Query Frame = 0
Query:  555 KERNDVVEKGLIPRLVELAQ-ESY-ADEIEATKRVDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGAYRQPGDGPAGLFCGPLRLLALEVYEQV 661
            K+RN  V     P  VE AQ ++Y A   E +  +  I DLR P + +PLA   KRRIIYH GPTNSGKTY+A+ERLK+AG      DG  GL+CGPLRLLALE+YE++
Sbjct:  164 KKRNAFV---FYPHFVEFAQTKNYMARSGEGSFTLAQITDLRLPHELYPLANAMKRRIIYHEGPTNSGKTYEALERLKQAGE-----DG--GLYCGPLRLLALEIYERM 262          
BLAST of mRNA_Ecto-sp13_S_contig11059.928.1 vs. uniprot
Match: F0YC56_AURAN (RNA helicase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC56_AURAN)

HSP 1 Score: 96.3 bits (238), Expect = 2.650e-17
Identity = 46/76 (60.53%), Postives = 57/76 (75.00%), Query Frame = 0
Query:  589 SIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGAYRQPGDGPAGLFCGPLRLLALEVYEQVRRA 664
            S  DLR P++ +P ARL +RR+IYHGGPTNSGKTY A+E LK+A A     DG  G++ GPLRLLALEVYE++  A
Sbjct:    2 SAADLRAPEEWYPKARLSRRRVIYHGGPTNSGKTYHALEALKRADA-----DGGGGVYAGPLRLLALEVYERLNAA 72          
BLAST of mRNA_Ecto-sp13_S_contig11059.928.1 vs. uniprot
Match: E1Z5S3_CHLVA (RNA helicase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z5S3_CHLVA)

HSP 1 Score: 96.7 bits (239), Expect = 4.180e-17
Identity = 46/98 (46.94%), Postives = 64/98 (65.31%), Query Frame = 0
Query:  562 EKGLIPRLVELAQESYADEIEATKRVDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGAYRQPGDGPAGLFCGPLRLLALEVYE 659
            ++ L P   +   E Y  +I+A + +   VDLRNP Q FP+AR  +RRIIYH GPTNSGKTY A++ ++ A          +G++CGPLRLLA+EVY+
Sbjct:  174 QQALFPYFAQFVLERYMADIKAYRDMIQTVDLRNPHQWFPVARALQRRIIYHAGPTNSGKTYNALQAMRSA---------QSGIYCGPLRLLAMEVYD 262          
BLAST of mRNA_Ecto-sp13_S_contig11059.928.1 vs. uniprot
Match: A0A482R8U6_9EURY (RNA helicase (Fragment) n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A482R8U6_9EURY)

HSP 1 Score: 95.1 bits (235), Expect = 4.620e-17
Identity = 45/97 (46.39%), Postives = 63/97 (64.95%), Query Frame = 0
Query:  565 LIPRLVELAQESYADEIEATKRVDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGAYRQPGDGPAGLFCGPLRLLALEVYEQV 661
            ++P +  +A+E++ +++ A + +    DLR P   +P AR  KRRII+H GPTNSGKTY A+  LK         D  +GL+CGPLRLLALEVYE +
Sbjct:  218 VLPLVASVAEETFGEQLAAARVMRQCADLRQPHTWYPRARRLKRRIIFHAGPTNSGKTYHALRALK---------DAHSGLYCGPLRLLALEVYESM 305          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11059.928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD59_ECTSI4.220e-30878.10RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5K988_9PHAE1.130e-22588.50RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A482SRD4_9ARCH8.310e-1950.48Helicase ATP-binding domain-containing protein n=1... [more]
A0A7S3HC17_9STRA9.480e-1952.53Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
A0A2P6VC43_9CHLO8.490e-1848.48RNA helicase n=1 Tax=Micractinium conductrix TaxID... [more]
A0A2D4BGH6_PYTIN1.450e-1752.21RNA helicase n=1 Tax=Pythium insidiosum TaxID=1147... [more]
A0A8K1CEJ7_PYTOL2.070e-1754.13Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0YC56_AURAN2.650e-1760.53RNA helicase (Fragment) n=1 Tax=Aureococcus anopha... [more]
E1Z5S3_CHLVA4.180e-1746.94RNA helicase n=1 Tax=Chlorella variabilis TaxID=55... [more]
A0A482R8U6_9EURY4.620e-1746.39RNA helicase (Fragment) n=1 Tax=Euryarchaeota arch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 596..663
e-value: 4.0E-22
score: 80.6
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 537..662
NoneNo IPR availablePANTHERPTHR12131:SF1ATP-DEPENDENT RNA HELICASE SUPV3L1, MITOCHONDRIALcoord: 537..662

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11059contigEcto-sp13_S_contig11059:198..4248 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11059.928.1mRNA_Ecto-sp13_S_contig11059.928.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11059 198..4248 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11059.928.1 ID=prot_Ecto-sp13_S_contig11059.928.1|Name=mRNA_Ecto-sp13_S_contig11059.928.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=666bp
MLAARRTYGVGRLTLGSSAVAVSRCSRLGALAHSTTTRCRSTRIGSIPQV
PVARQQHFSGGSTPGAHGLPSSPNVGLGRPASGGRRPAQLARREGMTEWV
RYQNMMHQRTGLARRDQLSSLREGVVGPSVNNDASSGGIATGADSSAAAA
AAGVAEASASDTATPTAAGSSVTLSPSATMATTSSESTAVIDEWSTSNSS
DSRPGSDELHATTNTTARGGPGPDDGDSAASDTVQPIATTRQETSSRISS
EDAVITDLDSRREATLNAELERKFGTEPPQREEISGKPRRRRSRGRGRRG
AARAVEGTANELQHEPPGAASGGGGIAPAAELETGELNEVPVAEAAGPIT
GISGDGAKPTSGEGTPRSTGGDESRRERRNRRGGHVTGDEKRGGSPGRGG
RGKQAAAASEEGGGEEGSGDSYSQQQGSAWKNIHAKKKLRWLLKGLASDY
GVQEMLALHHISKASLLTRMSCRKHTMSKLLRVFEDLVLDRPDTAFPGEE
GQKLQEKLSSLCYHPKFQADAVLMKRPIRTRTTSGRSFTFSSKQPKRGRE
GPFVKERNDVVEKGLIPRLVELAQESYADEIEATKRVDSIVDLRNPQQGF
PLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGAYRQPGDGPAGLFCGPL
RLLALEVYEQVRRAR*
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