prot_Ecto-sp13_S_contig10870.780.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10870.780.1
Unique Nameprot_Ecto-sp13_S_contig10870.780.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length742
Homology
BLAST of mRNA_Ecto-sp13_S_contig10870.780.1 vs. uniprot
Match: D8LMT0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMT0_ECTSI)

HSP 1 Score: 476 bits (1226), Expect = 2.490e-156
Identity = 353/750 (47.07%), Postives = 366/750 (48.80%), Query Frame = 0
Query:    1 YGYVRPARVVLDTNTAAATVAPPGVPSVGRVPTGAKTGVRPADNGCHKSRPHQCETMGGGXXGFVAAGD-VATAGSGAAAGTEKEGNAESGDGLEAGGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGSPPTPASP----GLADWEITEG--AREMLQRAQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSCGIGVGVGRVDDGTPSESSGXXXXXXXXXXXXXXXXXXXXXXXXPPTPARMKFEGWTPEERDPAGAGGNRVSSSGTPSLGFRSPLNSDVTASLIETALSVGKRQDVTSTPSEEVAYHLGSEITRPKPAPIKRLSLQGNESSVTGSLPKGPRGDFWGNASPESSVEASSRENTAEHRPDPSHSPETPATPRMLSPRFLAESTSGGDHTGRGGGAASACPSDRVTRSASRAVNPAAPKATDGPGGEVDANDNTDWCGSDHDSRGSSDGFDSDACPTPELSSPLRSATISVRDLQVLTPSAKVNTGDRGGXXXXXXXXXXXXXXXXXXXXXSEQCPTPELSSPLRSTGSAALCRRRLEEADGDGGRGDD-EVAGVGCSSGPLDFVSEEEYARAPKFLTIQVSRSVLNDTIGNLNAYAAPRLASPSELLLTVDEIMGIIDKGELSRTLLLSAAHLKRIEV 742
            YGYVRPARV LDTNTA AT APPGV SV R+PTGAKTG RPA NGCHKSRPHQCET GGG  GFVAAGD  ATA    AAGTEKEG+AESG+GLEAGGVT                                  XXXXXXX                      XXX              GLADWEITE   +R   +R Q +                                                                                         RSCG  VGVGRVDDGTPSESSG                        PPTPARMKFEGWTPEERDPAG GGNRVSS+GTPSLGFRSPLNSDVTASLIETALSVGKR DV STPSEE A   G+EITRPKP PIKR+SLQGNE+SVTG LPKGPRGDFWGNASPESSV ASSRENTAEHRPDP  +PETPAT                                                                                                                                                              AALCRRRLEEADGDG RGDD EVAGVG S GPLDFVSEEEYARAPKFLTIQVSRSVLNDTIGNLNAYA PRLASPSELLLTVDEIMGIID+GELSRTLLLSAAHLKRIE+
Sbjct:  119 YGYVRPARVALDTNTAVATAAPPGVSSVARLPTGAKTGGRPAANGCHKSRPHQCETRGGGG-GFVAAGDGAATAXXXXAAGTEKEGDAESGEGLEAGGVTTGAEAFVGSGVAGGGEVGAEEEEEEDAIADGAVAXXXXXXXGTGGVATPARAASTLPVPQEGEXXXXXXXXXXXXXXXXXGLADWEITEAGLSRSSSRRQQRR-----------------------------------------------------------------------------------------RSCG--VGVGRVDDGTPSESSGGAGAADTPMTGRAAASPWGGSSSNPPTPARMKFEGWTPEERDPAGVGGNRVSSTGTPSLGFRSPLNSDVTASLIETALSVGKRPDVASTPSEEGACRSGTEITRPKPTPIKRVSLQGNEASVTGGLPKGPRGDFWGNASPESSVVASSRENTAEHRPDPPRTPETPAT--------------------------------------------------------------------------------------------------------------------------------------------------------------AALCRRRLEEADGDGSRGDDDEVAGVGGSIGPLDFVSEEEYARAPKFLTIQVSRSVLNDTIGNLNAYAEPRLASPSELLLTVDEIMGIIDQGELSRTLLLSAAHLKRIEM 618          
BLAST of mRNA_Ecto-sp13_S_contig10870.780.1 vs. uniprot
Match: A0A6H5JWA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWA7_9PHAE)

HSP 1 Score: 276 bits (707), Expect = 7.830e-85
Identity = 164/217 (75.58%), Postives = 172/217 (79.26%), Query Frame = 0
Query:  478 MLSPRFLAESTSGGDHTGRGGGAASACPSDRVTRSASRAVNPAAPKATDGPGGEVDANDNTDWCGSDHDSRGSSDGFDSDACPTPELSSPLRSATISVRDLQVLTPSAKVNTGDRGGXXXXXXXXXXXXXXXXXXXXXSEQCPTPELSSPLRSTGSAALCRRRLEEADGDGGRGDD-EVAGVGCSSGPLDFVSEEEYARA---------PKFLTIQV 684
            M SPRFLAE  SGGD TGRGGG ASACPSDRVTRS SRA+ PAA KA DGPGG+VDAN NTDW GSDHD  GSSDGFDSDACPTPELSSPLRSAT+SVRDLQVLTPSA VNT D GG          XXXXXX     SEQCPTPELSSPLRS GSAALCRRRLEEA GDGGRGDD EVAGVG +SGPLDFVSEEEYARA         P++L++ V
Sbjct:    1 MFSPRFLAEGASGGDDTGRGGGTASACPSDRVTRSPSRAMKPAASKAADGPGGDVDANVNTDWRGSDHDGCGSSDGFDSDACPTPELSSPLRSATVSVRDLQVLTPSAMVNTADGGGHRGGSTYNYDXXXXXX-----SEQCPTPELSSPLRSAGSAALCRRRLEEAGGDGGRGDDDEVAGVGGTSGPLDFVSEEEYARAGGVPRCNSPPRWLSVAV 212          
BLAST of mRNA_Ecto-sp13_S_contig10870.780.1 vs. uniprot
Match: A0A6H5JNT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNT8_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.520e-29
Identity = 63/67 (94.03%), Postives = 67/67 (100.00%), Query Frame = 0
Query:  676 APKFLTIQVSRSVLNDTIGNLNAYAAPRLASPSELLLTVDEIMGIIDKGELSRTLLLSAAHLKRIEV 742
            APKFLTIQVSRSVLN+T+GNLNAYAAPRLASPSELLLTVDEIMGIID+GELSRTLLLSAAHLKRIE+
Sbjct:    3 APKFLTIQVSRSVLNETVGNLNAYAAPRLASPSELLLTVDEIMGIIDQGELSRTLLLSAAHLKRIEM 69          
BLAST of mRNA_Ecto-sp13_S_contig10870.780.1 vs. uniprot
Match: A0A4D9D5B5_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5B5_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 6.120e-7
Identity = 35/79 (44.30%), Postives = 51/79 (64.56%), Query Frame = 0
Query:  664 PLDFVSEEEYARAPKFLTIQVSRSVLNDTIGNLNAYAAPRL--ASPSELLLTVDEIMGIIDKGELSRTLLLSAAHLKRI 740
            P+  V EEE+ARAP F+ IQV+R +LND I   N++   +          L +D++  II +G+LS+T+LLS AHLKR+
Sbjct:  965 PIPEVPEEEFARAPSFIQIQVTREMLNDAIKVFNSHMKGKQHGGKSGVQALPLDQVTEIIAQGDLSKTILLSLAHLKRV 1043          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10870.780.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LMT0_ECTSI2.490e-15647.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWA7_9PHAE7.830e-8575.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNT8_9PHAE1.520e-2994.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9D5B5_9STRA6.120e-744.30Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10870contigEcto-sp13_S_contig10870:79..5528 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10870.780.1mRNA_Ecto-sp13_S_contig10870.780.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10870 79..5528 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10870.780.1 ID=prot_Ecto-sp13_S_contig10870.780.1|Name=mRNA_Ecto-sp13_S_contig10870.780.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=742bp
YGYVRPARVVLDTNTAAATVAPPGVPSVGRVPTGAKTGVRPADNGCHKSR
PHQCETMGGGGGGFVAAGDVATAGSGAAAGTEKEGNAESGDGLEAGGVTT
AAAGGEGEAEEEEEEEEENATADGAVTAAEGAASGTGGVSTPTRATTTLA
VPEEGGEEEEDDDDEPGSPPTPASPGLADWEITEGAREMLQRAQPQQQQQ
QQQQQDQSERSSSGGDATAAAPRSLEELLAENSSLSSGGSRGGNSGGGGG
GGGRRSSVSSNWSPPPSSTAEAALSRSSSRRQQRRRSCGIGVGVGRVDDG
TPSESSGGAGAADTPTTGGGRMSPGGGSSSNPPTPARMKFEGWTPEERDP
AGAGGNRVSSSGTPSLGFRSPLNSDVTASLIETALSVGKRQDVTSTPSEE
VAYHLGSEITRPKPAPIKRLSLQGNESSVTGSLPKGPRGDFWGNASPESS
VEASSRENTAEHRPDPSHSPETPATPRMLSPRFLAESTSGGDHTGRGGGA
ASACPSDRVTRSASRAVNPAAPKATDGPGGEVDANDNTDWCGSDHDSRGS
SDGFDSDACPTPELSSPLRSATISVRDLQVLTPSAKVNTGDRGGGGGGGY
SGGSTYNYDDDDDDDSEQCPTPELSSPLRSTGSAALCRRRLEEADGDGGR
GDDEVAGVGCSSGPLDFVSEEEYARAPKFLTIQVSRSVLNDTIGNLNAYA
APRLASPSELLLTVDEIMGIIDKGELSRTLLLSAAHLKRIEV
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