prot_Ecto-sp13_S_contig10863.772.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10863.772.1
Unique Nameprot_Ecto-sp13_S_contig10863.772.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length195
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10863.772.1 vs. uniprot
Match: D8LDZ6_ECTSI (Guanylyl cyclase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ6_ECTSI)

HSP 1 Score: 373 bits (957), Expect = 9.490e-120
Identity = 187/192 (97.40%), Postives = 190/192 (98.96%), Query Frame = 0 
Query:    4 ASTGLPGRVQLSKSAFESLSPEKQSACEIRRGVAMKGKGLIDTHLASFDPDGLGQRLWRNFRRFEKMTKVYDPNFQHKGGGTKKGQDQGVFSQEGKIHMIRVKRLKFTLKGSNYEDSQNTALGDELEKEYQHQYNASHLQHFQIFLLVAWVCVCASLYLDFYRSPSQEATRARVGIRVSVCLLLLIVLLSTR 195
            ASTGLPGRVQLSKSAFESLSPEKQSACE+RRGVAMKGKGLIDTHLASFDPDGLGQRLWRNFRRFEKMTKVYDPNFQHKGGGTKKGQDQGVFSQEGKIHMIRVKRLKFTLKGSNYEDSQNTALGDELEKEYQHQYNASHLQHFQIFLLVAWVCVCAS+YLDFYRSPS E TRARVGIRVSVCLLLL+VLLSTR
Sbjct:  429 ASTGLPGRVQLSKSAFESLSPEKQSACELRRGVAMKGKGLIDTHLASFDPDGLGQRLWRNFRRFEKMTKVYDPNFQHKGGGTKKGQDQGVFSQEGKIHMIRVKRLKFTLKGSNYEDSQNTALGDELEKEYQHQYNASHLQHFQIFLLVAWVCVCASIYLDFYRSPS-EVTRARVGIRVSVCLLLLVVLLSTR 619
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BLAST of mRNA_Ecto-sp13_S_contig10863.772.1 vs. uniprot
Match: A0A835Z2D8_9STRA (Adenylate and guanylate cyclase catalytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2D8_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 4.190e-11
Identity = 52/193 (26.94%), Postives = 90/193 (46.63%), Query Frame = 0 
Query:    5 STGLPGRVQLSKSAFESLSPEKQSACEIRRGVAMKGKGLIDTHLASFDPDGLGQRLWRNFRRFEKMTKVYDPNFQHKGGGTKKGQDQGVFSQEGKIHMIRVKRLKFTLKGSNYEDSQNTALGDELEKEYQHQYNASHLQHFQIFLLVAWVCVCASLYLDFYRSPSQEATRAR---VGIRVSVCLLLLIVLLST 194
            STG   R+QLS SA+ SL+   Q  C  R  V +KGKG+++T+    D D L  R +  FR+F      YDP+ ++ G                 + ++  ++ K        ED    +  + + ++Y   +N+S   H Q  LL+  V  CAS+Y +F+      +  A+   +G+R    ++  +VL ++
Sbjct:  591 STGAKNRIQLSASAYNSLTQAYQERCTARGSVQVKGKGIMNTYWLDCDEDELNAR-YAEFRQFRYAAMQYDPDLKNAG-----------------LDLLNNQQDK-------KEDEFVASTVENVRRDYNTLHNSSRRPHVQRVLLLVLVATCASMYAEFFGEGDDLSVTAKKVWMGLRFGAFVMAAVVLAAS 758
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10863.772.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDZ6_ECTSI9.490e-12097.40Guanylyl cyclase n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A835Z2D8_9STRA4.190e-1126.94Adenylate and guanylate cyclase catalytic domain-c... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 177..194
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 195..195
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 145..165
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..144
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 166..176
NoneNo IPR availableTMHMMTMhelixcoord: 177..194
NoneNo IPR availableTMHMMTMhelixcoord: 142..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10863contigEcto-sp13_S_contig10863:1861..3838 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10863.772.1mRNA_Ecto-sp13_S_contig10863.772.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10863 1861..3838 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10863.772.1 ID=prot_Ecto-sp13_S_contig10863.772.1|Name=mRNA_Ecto-sp13_S_contig10863.772.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=195bp
MCAASTGLPGRVQLSKSAFESLSPEKQSACEIRRGVAMKGKGLIDTHLAS
FDPDGLGQRLWRNFRRFEKMTKVYDPNFQHKGGGTKKGQDQGVFSQEGKI
HMIRVKRLKFTLKGSNYEDSQNTALGDELEKEYQHQYNASHLQHFQIFLL
VAWVCVCASLYLDFYRSPSQEATRARVGIRVSVCLLLLIVLLSTR
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