prot_Ecto-sp13_S_contig10816.732.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10816.732.1
Unique Nameprot_Ecto-sp13_S_contig10816.732.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length419
Homology
BLAST of mRNA_Ecto-sp13_S_contig10816.732.1 vs. uniprot
Match: D7G9G1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G1_ECTSI)

HSP 1 Score: 614 bits (1583), Expect = 2.580e-218
Identity = 360/424 (84.91%), Postives = 371/424 (87.50%), Query Frame = 0
Query:    1 MRRKSYAQPATSFSVEDTLLLASSALAASASGT--APATPQRRWEASPSTPRNWPIMTSSASNTPSSRHRHIRQWDSTPRRGVVGAGGPAAGEKHGGEPGRRQSWGERKQTEAEEERHGGGVSGF---SGRVPGEGAAARGYVRAKKEQPLGAGVRRAGGGRGRANAPLTGSSPRSGVVLRRSWEERXXXXXXXXXXXXXXXXXXX-REKDDGVARPRGVAGFGVRVSTAGEPXXXXXYGGSXXSTPLSAKPPGCDWDSSVPAAGGLDGRRSSATRAEEEDRWPQDFLEKSPPSEPGSHKTCSTQWSEMESQSQGSGNSYAGSTTSSSAMSAHPAGRRSVHAWSTTTSPRPHAPTIAEAKRPLPASSSPSLAVVVSTGGPRSRPEPCKPREEVSGGDTPNLPTPGALTPGALRARSESAPMIWD 418
            MRRKSY QPATSFSVEDTLLLASS L ASASGT  APATPQRRWEASPSTPRNWP MTSSASNTPSSRHR IRQWDST  RGVVGAGGPAAG+++GGEPGR QSWGERK+TEAEEERHGGGVSGF   SGRVPGEGAAAR YV AK EQPLG GVRRAGGGRGRA+APLT SSP SGVVLRRSWEER       XXXXXXXX     REKD+GVARPRGVA FGV VST GEPXXXXX GGS  STPLSAKPPGCDWDS VPAAGGLDGRRS ATRAEEEDRW +DFLEKSPPSEPGSHKTCSTQWSEMESQSQGSGNSYAGSTTSSSAMSAHPAGRRSVH WS+TTSPRPHAPTIAEAKR  PASSSPSLAVVVSTGGP+SRPEP KPRE+VSGGDTP+L T        LRARSESAPMIWD
Sbjct:    1 MRRKSYTQPATSFSVEDTLLLASSGLTASASGTSPAPATPQRRWEASPSTPRNWPTMTSSASNTPSSRHRRIRQWDSTQLRGVVGAGGPAAGKRYGGEPGRSQSWGERKETEAEEERHGGGVSGFGGWSGRVPGEGAAARVYVGAKLEQPLGVGVRRAGGGRGRASAPLTESSPSSGVVLRRSWEERKFSTKDEXXXXXXXXKRRTSREKDEGVARPRGVASFGVGVSTEGEPXXXXXDGGSPPSTPLSAKPPGCDWDSPVPAAGGLDGRRSRATRAEEEDRWLEDFLEKSPPSEPGSHKTCSTQWSEMESQSQGSGNSYAGSTTSSSAMSAHPAGRRSVHTWSSTTSPRPHAPTIAEAKRHPPASSSPSLAVVVSTGGPKSRPEPWKPREDVSGGDTPSLLTXXXXXXXXLRARSESAPMIWD 424          
BLAST of mRNA_Ecto-sp13_S_contig10816.732.1 vs. uniprot
Match: A0A6H5KGG6_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGG6_9PHAE)

HSP 1 Score: 584 bits (1505), Expect = 6.400e-198
Identity = 357/419 (85.20%), Postives = 367/419 (87.59%), Query Frame = 0
Query:    1 MRRKSYAQPATSFSVEDTLLLASSALAASASGTAPATPQRRWEASPSTPRNWPIMTSSASNTPSSRHRHIRQWDSTPRRGVVGAGGPAAGEKHGGEPGRRQSWGERKQTEAEEERHGGGVSGFSGRVPGEGAAARGYVRAKKEQPLGAGVRRAGGGRGRANAPLTGSSPRSGVVLRRSWEERXXXXXXXXXXXXXXXXXXX-REKDDGVARPRGVAGFGVRVSTAGEPXXXXXYGGSXXSTPLSAKPPGCDWDSSVPAAGGLDGRRSSATRAEEEDRWPQDFLEKSPPSEPGSHKTCSTQWSEMESQSQGSGNSYAGSTTSSSAMSAHPAGRRSVHAWSTTTSPRPHAPTIAEAKRPLPASSSPSLAVVVSTGGPRSRPEPCKPREEVSGGDTPNLPTPGALTPGALRARSESAPMIWD 418
            MRRKSYAQ ATSFSVEDTLLLASS LAAS SGTAPATPQRRWEASPSTPRNWPIMTSSA NTPS RHR IRQ DS+PRRGVVGAGGPAA  +HGGEPGRRQSWGE+KQTEAEEE HGGGVSGFSGRVPGEGAAARGYVR K+EQPLG GVRRAGGGRGRA+APLT SSP  GVVLRRSWE  XXXXXXXXXXXXXXXXXXX REKDDGVAR RGVAGF V VSTAGEPXXXXX  G             CDWDS VPAAGGLDGRRSSATRAEE DRWP+DFLEKSPPSEPGSHKTCSTQWSEM+SQSQGSGNSYAGST SSSAMSAHPAGRRSVH+ STTTSPRPHAPTIAEAKRP PASSSPSLAVVVSTGGP+S PEPC PRE+VSGGDTPNL T        LRARSESAPMIWD
Sbjct:  628 MRRKSYAQRATSFSVEDTLLLASSGLAASGSGTAPATPQRRWEASPSTPRNWPIMTSSAGNTPSRRHRRIRQRDSSPRRGVVGAGGPAAANRHGGEPGRRQSWGEQKQTEAEEEIHGGGVSGFSGRVPGEGAAARGYVRTKQEQPLGVGVRRAGGGRGRASAPLTESSPSGGVVLRRSWEXXXXXXXXXXXXXXXXXXXXXXREKDDGVARLRGVAGFDVGVSTAGEPXXXXXXXG-------------CDWDSPVPAAGGLDGRRSSATRAEE-DRWPEDFLEKSPPSEPGSHKTCSTQWSEMDSQSQGSGNSYAGSTNSSSAMSAHPAGRRSVHSRSTTTSPRPHAPTIAEAKRPPPASSSPSLAVVVSTGGPKSGPEPCNPREDVSGGDTPNLLTXXXXXXXXLRARSESAPMIWD 1032          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10816.732.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G9G1_ECTSI2.580e-21884.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KGG6_9PHAE6.400e-19885.20RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..418
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10816contigEcto-sp13_S_contig10816:2408..4087 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10816.732.1mRNA_Ecto-sp13_S_contig10816.732.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10816 2229..5674 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10816.732.1 ID=prot_Ecto-sp13_S_contig10816.732.1|Name=mRNA_Ecto-sp13_S_contig10816.732.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=419bp
MRRKSYAQPATSFSVEDTLLLASSALAASASGTAPATPQRRWEASPSTPR
NWPIMTSSASNTPSSRHRHIRQWDSTPRRGVVGAGGPAAGEKHGGEPGRR
QSWGERKQTEAEEERHGGGVSGFSGRVPGEGAAARGYVRAKKEQPLGAGV
RRAGGGRGRANAPLTGSSPRSGVVLRRSWEERKSSTRDEEEEEEEGKRRS
SREKDDGVARPRGVAGFGVRVSTAGEPPPPPPYGGSPPSTPLSAKPPGCD
WDSSVPAAGGLDGRRSSATRAEEEDRWPQDFLEKSPPSEPGSHKTCSTQW
SEMESQSQGSGNSYAGSTTSSSAMSAHPAGRRSVHAWSTTTSPRPHAPTI
AEAKRPLPASSSPSLAVVVSTGGPRSRPEPCKPREEVSGGDTPNLPTPGA
LTPGALRARSESAPMIWD*
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