prot_Ecto-sp13_S_contig10796.720.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10796.720.1
Unique Nameprot_Ecto-sp13_S_contig10796.720.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length220
Homology
BLAST of mRNA_Ecto-sp13_S_contig10796.720.1 vs. uniprot
Match: D7G403_ECTSI (UDENN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G403_ECTSI)

HSP 1 Score: 356 bits (914), Expect = 2.940e-117
Identity = 191/204 (93.63%), Postives = 197/204 (96.57%), Query Frame = 0
Query:   16 LVDLVLDQHAGLHERLTSVSLDKTMIANEGRLRRLRTSAGITERDVDPWARCRGPGGGAAACGRGVELRNCIRRIQLEKSVGEEVAAEAFELLSECLDTEAELQVLLGLLPESKRGAGLLALGLLSRTARTRRSTVVLFKKLESFESTRPAVLCMNDFFKLALSRQAQELERAPPETAKSASAGGSAVVGVGGGGVPRRRSIRA 219
            LVDLVLDQHAGLHERLTS+SLDKTMIANEGRLRRLR SAGI+ER VDPWARCRGPGGGAAACGRGVELRNCIRRIQLEK VGEEVAA+AFELLSECLDTEAELQVLLGLLPESKRGAGLLALGLLSR+A TRRSTVVLFKKLESFESTRPAVLCMNDFFKLALSRQAQELE APPETA SASA GSAVVG+GGGGVP+RRSIRA
Sbjct:  436 LVDLVLDQHAGLHERLTSLSLDKTMIANEGRLRRLRISAGISERGVDPWARCRGPGGGAAACGRGVELRNCIRRIQLEKFVGEEVAAKAFELLSECLDTEAELQVLLGLLPESKRGAGLLALGLLSRSASTRRSTVVLFKKLESFESTRPAVLCMNDFFKLALSRQAQELESAPPETATSASAAGSAVVGLGGGGVPKRRSIRA 639          
BLAST of mRNA_Ecto-sp13_S_contig10796.720.1 vs. uniprot
Match: A0A836CED8_9STRA (Docking domain of Afi1 for Arf3 in vesicle trafficking-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CED8_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 4.040e-11
Identity = 48/122 (39.34%), Postives = 65/122 (53.28%), Query Frame = 0
Query:   61 VDPWARCRGPGGGAAACGRGVELRNCIRRIQLEKSVG--EEVAAEAFELLSECLDTEAELQVLLGLLPESKRGAGLLALGLLSRTARTRRSTVVLFKKLESFESTRPAVLCMNDFFKLALSR 180
             DPW      GG +     G +LR  +RR+ L    G  ++   E F  L   L +EA LQVLLGL+PESK G  +L  GL+  +A  R   + L ++L +FESTRPA+  MND   +   R
Sbjct:  852 TDPWRYMELAGGIS-----GAQLRRHVRRLTLADGGGLDDQEVKEIFRDLDTALQSEASLQVLLGLMPESKGGIFVLGCGLMHGSAEVRAHALSLHRRLNAFESTRPAIYAMNDLLAMTYMR 968          
BLAST of mRNA_Ecto-sp13_S_contig10796.720.1 vs. uniprot
Match: A0A024USN9_9STRA (UDENN domain-containing protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USN9_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 6.500e-5
Identity = 33/95 (34.74%), Postives = 52/95 (54.74%), Query Frame = 0
Query:   79 RGVELRNCIRRIQLEKSVGEEVAAEAFELLSECLDTEAELQVLLGLLPESKRGAGLLALGLLSRTARTRRSTVVLFKKLESFESTRPAVLCMNDF 173
            RG +L+  +R +  EK   +      +      L+TE E + LL  +P SK G  ++A GL  R+   + +T+VL K+LESF+ST+  V  +N F
Sbjct:  417 RGTDLKRHLRTLMHEKVPDDAQVERIYVDFVTLLNTEDEFKELLSYIPRSKGGLHVVAQGLFHRSISVKYNTIVLLKRLESFDSTKEFVHALNPF 511          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10796.720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G403_ECTSI2.940e-11793.63UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A836CED8_9STRA4.040e-1139.34Docking domain of Afi1 for Arf3 in vesicle traffic... [more]
A0A024USN9_9STRA6.500e-534.74UDENN domain-containing protein n=3 Tax=Aphanomyce... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10796contigEcto-sp13_S_contig10796:901..4390 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10796.720.1mRNA_Ecto-sp13_S_contig10796.720.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10796 901..5540 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10796.720.1 ID=prot_Ecto-sp13_S_contig10796.720.1|Name=mRNA_Ecto-sp13_S_contig10796.720.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=220bp
MGALRVSRLYAGKMALVDLVLDQHAGLHERLTSVSLDKTMIANEGRLRRL
RTSAGITERDVDPWARCRGPGGGAAACGRGVELRNCIRRIQLEKSVGEEV
AAEAFELLSECLDTEAELQVLLGLLPESKRGAGLLALGLLSRTARTRRST
VVLFKKLESFESTRPAVLCMNDFFKLALSRQAQELERAPPETAKSASAGG
SAVVGVGGGGVPRRRSIRA*
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