prot_Ecto-sp13_S_contig10642.594.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10642.594.1
Unique Nameprot_Ecto-sp13_S_contig10642.594.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length218
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10642.594.1 vs. uniprot
Match: A0A6H5KUE0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUE0_9PHAE)

HSP 1 Score: 410 bits (1053), Expect = 3.000e-140
Identity = 207/217 (95.39%), Postives = 212/217 (97.70%), Query Frame = 0 
Query:    1 MSDEDLYQAKLGAHRAMLCHFLSLLSSSLGKQQLKTGLSLGEVVAATRSAYLAVPEDRLAAVYPLFDTHGDGHLDAESADLAVDAVVLSVTAASERCYAAAARPALDKKTAAVMPATMKYVLWDVMEIPMKRRCSFAWAEDRKQVGPDEWRVGWEQFAPSRRQHFPEMDSVARNYVAEFSRRRSAWHTSRKGRKEAMVYGSALFVAVLFIDNLLKMV 217
            MSDEDLYQA+LGAHRAMLCHFLSLLSSSLGKQQLKTGLSLGEVVAATRSAYLA PEDRLAAVYPLFDTHGDGHLD ES DLAVDAVVLSVTAASERCYAAAARPALDKKTAAVMPATMKYVLWDVME+PMKRRCSFAWAE+RKQVGPDEWRV W+QFAPSRRQHFPEMDSVAR+YVAEFSRRRSAWHTSRKGRKEAMVYGSALFVAVL IDNLLKMV
Sbjct:  273 MSDEDLYQARLGAHRAMLCHFLSLLSSSLGKQQLKTGLSLGEVVAATRSAYLAAPEDRLAAVYPLFDTHGDGHLDTESVDLAVDAVVLSVTAASERCYAAAARPALDKKTAAVMPATMKYVLWDVMEVPMKRRCSFAWAENRKQVGPDEWRVSWDQFAPSRRQHFPEMDSVARDYVAEFSRRRSAWHTSRKGRKEAMVYGSALFVAVLIIDNLLKMV 489
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BLAST of mRNA_Ecto-sp13_S_contig10642.594.1 vs. uniprot
Match: A0A836CPD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPD1_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 8.810e-19
Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 0 
Query:  114 MPATMKYVLWDVMEIPMKRRCSFAWAEDRKQVGPDEWRVGWEQFAPSRRQHFPEMDSVARNYVAEFSRRRSAWHTSRKGRKEAMVYGSALFVAVLFIDN 212
            MP+ ++Y  WD ++ P KRRC+FA+AE RKQVGP EW V  + F  ++R +F ++  V    +      R  WH  RK RK A +YG+ LF A + +D 
Sbjct:    1 MPSALRYATWDRLDFPSKRRCAFAFAEGRKQVGPVEWHVTADAFLETQRTYFVDLVRVGGALMDVMEDERWQWHMLRKRRKRAAIYGALLFSATVVLDT 99
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10642.594.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KUE0_9PHAE3.000e-14095.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CPD1_9STRA8.810e-1941.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..195
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 215..217
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 196..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10642contigEcto-sp13_S_contig10642:1967..4643 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10642.594.1mRNA_Ecto-sp13_S_contig10642.594.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10642 1439..5646 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10642.594.1 ID=prot_Ecto-sp13_S_contig10642.594.1|Name=mRNA_Ecto-sp13_S_contig10642.594.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=218bp
MSDEDLYQAKLGAHRAMLCHFLSLLSSSLGKQQLKTGLSLGEVVAATRSA
YLAVPEDRLAAVYPLFDTHGDGHLDAESADLAVDAVVLSVTAASERCYAA
AARPALDKKTAAVMPATMKYVLWDVMEIPMKRRCSFAWAEDRKQVGPDEW
RVGWEQFAPSRRQHFPEMDSVARNYVAEFSRRRSAWHTSRKGRKEAMVYG
SALFVAVLFIDNLLKMV*
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