prot_Ecto-sp13_S_contig10621.580.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10621.580.1
Unique Nameprot_Ecto-sp13_S_contig10621.580.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length252
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10621.580.1 vs. uniprot
Match: D7G220_ECTSI (FYR N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G220_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 8.790e-10
Identity = 79/100 (79.00%), Postives = 80/100 (80.00%), Query Frame = 0 
Query:  161 AFSAFDMMPSLAXXXXXXXXXXXXXXXXXXXXXXXXXDNDSIVSDSVRSVGSPSAGGGVGSSNLSGRVFGGFGIGGG--------RSSPSLLGGAGGKAG 252
            AFSAFDMMPSLA XXXXXXXXXXXXXXXXXXXXXXXX  DSIVSDSVRSVGS SAG    SSNL+GRV GGFGIG G        RSSPS LGG GGKAG
Sbjct:  246 AFSAFDMMPSLASXXXXXXXXXXXXXXXXXXXXXXXXXXDSIVSDSVRSVGSRSAGXXXXSSNLNGRVLGGFGIGIGXXXXXXXXRSSPSRLGGTGGKAG 345
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10621.580.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G220_ECTSI8.790e-1079.00FYR N-terminal domain-containing protein n=2 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10621contigEcto-sp13_S_contig10621:1444..2199 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10621.580.1mRNA_Ecto-sp13_S_contig10621.580.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10621 1444..2199 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10621.580.1 ID=prot_Ecto-sp13_S_contig10621.580.1|Name=mRNA_Ecto-sp13_S_contig10621.580.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=252bp
RDKGDHGEEPSPTALPSSQRQADGGSGSSSGGAAGSSRFFPIHPSTSFST
TVPSPGHLASGGGSATAPAAAAGQPLPAHNRGDAVEQNASLGGSNGSGDG
GGVATTSRVAAMPPAGVSGPGQTTRPGASCSSSARQQQQQQQQQQGSAGR
RAESPDPPPRAFSAFDMMPSLASEDESLDDDDGNTASSSDGGGAAGGDND
SIVSDSVRSVGSPSAGGGVGSSNLSGRVFGGFGIGGGRSSPSLLGGAGGK
AG
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