prot_Ecto-sp13_S_contig1062.577.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1062.577.1
Unique Nameprot_Ecto-sp13_S_contig1062.577.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1137
Homology
BLAST of mRNA_Ecto-sp13_S_contig1062.577.1 vs. uniprot
Match: D8LHJ8_ECTSI (CHROMODOMAIN HELICASE DNA BINDING n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHJ8_ECTSI)

HSP 1 Score: 1033 bits (2670), Expect = 0.000e+0
Identity = 861/1142 (75.39%), Postives = 872/1142 (76.36%), Query Frame = 0
Query:    1 MASVGDRSLADVAAVCRAMIAVMLQMEAVHNAQAIVKREREDQIVQRLVAIGNKAREEATAAXXXXXXXXXXXXXXXXXXXXXXXXAXXXXVAENGAAGSSTAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEVKPAAVASAERAPSAIEGGSGTAGAVVXXXXXXXXXXXXXXXVQKETDTMTILNQVWKPKNVQVGSKFRASLVRITSKLSTLDEIDDLRQMLNSHDPPFGRHLNQVPAGWGPAHDKWLAHAALQQGWFTSMQKKKAMKIIEDARGLWPGLISMPDHVILGRRLKQLVAKFRTEASRHAAAAKKVERERADAAYKQRKFLADMERQKLKREQEERIRREWQAREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEILRAPTQQQPEQPPVRPYLPPGLDASSPNVMTVHDARGNIAGYQVWPSMAESQLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDG------REGMAQKVPLVGAGGAGGVGRAMIGPASAPTPASSSNGSSRAAATAMSAPPGGLSIAACAAMSDDGIMLRHAVHNLGVPVSMLLSHNPAAGGGSASAYSPLRAVLDMSWLRLANGNDLNAKGAESIGVHLLSKAASIVGDNLGLRLPPYPSHPISVSERTTLTAMLQSAAKATQLRASLLAYTKLKEMQSFAARLAQLTELKAAPMPSWWKPAVHDAHLLIASCIYGSSSDYGVDKAMKETTLAMLQENGLAFAAQEKENNNKAGGGPSIVKGDGAGGVAASLVPGCQSAEPMEPLAAMTNPPLTAAAAKSRIKALQTAAFVSARHHSSLPAQPQRSAAVSGVNXXXXXXXXXXNTDDCVVVSVATSGDGXXXXXGDRVHRPLAGAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSISNAASGLPAVAATTPSTAKRPVPEVVVLDLSGDEGSGDKREAGVLESPAKKAKLLEHPLSPQASKTRPIARTTASMAGTXXXXXXXXXATGRAAVSNGSGVDVSSKAGGKGNEVAAGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKATPGPKTGTLDSFWSSG 1136
            MASV DRSLADVAAVCRAMIAVMLQMEAVHNAQAIVKREREDQIVQRLVAIGNKAREEA AAXXXXXXXXXXXXXXXXXXXXXXXX XXXX                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             PEVK AAVASA  APS             XXXXXXXXXXXXXX VQKETDTMTILNQVWKPKNVQVGSKFRASLVRITSKLSTLDEI+DLRQML+SHDPPFGRHLNQVPAGW PAHDKWLAHAALQQGWFTSMQKKKAMKIIEDARGLWPGLISMPDHVILGRRLKQLVAKFRTEASRHAAAAKKVERERADAA+KQ+KFLADMERQKLKREQEE IRREWQARE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEILRAPTQ+QPEQPPVRPYLPPGLDASSPNVMTVHDARGNIAGYQVWPSMAE QLAA                    XXXXXXXXXXXXXX        REG+ QKVP VGA       RAMIGP SA +  S SNGSSRAAA AMSAPPGGLSIAACAAMSDDGIMLRHAVHNLGVPVSMLLSHNPAAGGGSASAYSPLRAVLDMS                                               VSERTTLTAMLQSAAKATQLRASLLAYT+LKEMQSFAARLAQLTELKAAPMPSWWKPAVHDAHLLIASCIYGSSSDYGV+KAMKETTLAMLQENGLAFAAQEKENN KAGGGPS VK DGAGG+AASLVPGCQSAEPMEPL AMTNPPLTAAAAKSRIKALQTAAFVSARHHSSLPAQPQRSAAV                                                                                                            VVLDLSGDEG GDKREAGV ESPAKKAKLLEHPLSPQ SKTRPIAR TA  AG XXXXXXX  ATGRAAVSNGSGVDVSSKAGG G+EVAAGE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKK TPGPKTGTLDSFWSSG
Sbjct: 1495 MASVTDRSLADVAAVCRAMIAVMLQMEAVHNAQAIVKREREDQIVQRLVAIGNKAREEANAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGAGGLGADGAAGPEVKLAAVASAXGAPSVAXXXXXXXXXXXXXXXXXXXXXXXXXVVQKETDTMTILNQVWKPKNVQVGSKFRASLVRITSKLSTLDEIEDLRQMLSSHDPPFGRHLNQVPAGWEPAHDKWLAHAALQQGWFTSMQKKKAMKIIEDARGLWPGLISMPDHVILGRRLKQLVAKFRTEASRHAAAAKKVERERADAAFKQKKFLADMERQKLKREQEESIRREWQAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEILRAPTQKQPEQPPVRPYLPPGLDASSPNVMTVHDARGNIAGYQVWPSMAERQLAAAAAAMAGSASNKDGRVLSSGXXXXXXXXXXXXXXXXXXXXXXREGVTQKVPFVGAXXXXXXXRAMIGP-SAASAXSRSNGSSRAAAIAMSAPPGGLSIAACAAMSDDGIMLRHAVHNLGVPVSMLLSHNPAAGGGSASAYSPLRAVLDMS-----------------------------------------------VSERTTLTAMLQSAAKATQLRASLLAYTELKEMQSFAARLAQLTELKAAPMPSWWKPAVHDAHLLIASCIYGSSSDYGVEKAMKETTLAMLQENGLAFAAQEKENN-KAGGGPSTVKADGAGGIAASLVPGCQSAEPMEPLLAMTNPPLTAAAAKSRIKALQTAAFVSARHHSSLPAQPQRSAAV------------------------------------------------------------------------------------------------------------VVLDLSGDEGCGDKREAGVSESPAKKAKLLEHPLSPQTSKTRPIARKTAPTAGXXXXXXXXSGATGRAAVSNGSGVDVSSKAGGNGDEVAAGE-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKVTPGPKTGTLDSFWSSG 2463          
BLAST of mRNA_Ecto-sp13_S_contig1062.577.1 vs. uniprot
Match: A0A6H5JB56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB56_9PHAE)

HSP 1 Score: 919 bits (2374), Expect = 8.600e-300
Identity = 762/985 (77.36%), Postives = 774/985 (78.58%), Query Frame = 0
Query:  154 PEVKPAAVASAERAPSAIEGGSGTAGAVVXXXXXXXXXXXXXXXVQKETDTMTILNQVWKPKNVQVGSKFRASLVRITSKLSTLDEIDDLRQMLNSHDPPFGRHLNQVPAGWGPAHDKWLAHAALQQGWFTSMQKKKAMKIIEDARGLWPGLISMPDHVILGRRLKQLVAKFRTEASRHAAAAKKVERERADAAYKQRKFLADMERQKLKREQEERIRREWQAREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEILRAPTQQQPEQPPVRPYLPPGLDASSPNVMTVHDARGNIAGYQVWPSMAESQLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGREGMAQKVPLVGAGGAGGVGRAMIGPASAPTPASSSNGSSRAAATAMSAPPGGLSIAACAAMSDDGIMLRHAVHNLGVPVSMLLSHNPAAGGGSASAYSPLRAVLDMSWLRLANGNDLNAKGAESIGVHLLSKAASIVGDNLGLRLPPYPSHPISVSERTTLTAMLQSAAKATQLRASLLAYTKLKEMQSFAARLAQLTELKAAPMPSWWKPAVHDAHLLIASCIYGSSSDYGVDKAMKETTLAMLQENGLAFAAQEKENNNKAGGGPSIVKGDGAGGVAASLVPGCQSAEPMEPLAAMTNPPLTAAAAKSRIKALQTAAFVSARHHSSLPAQPQRSAAVSGVNXXXXXXXXXXNTDDCVVVSVATSGDGXXXXXGDRVHRPLAGAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VSSISNAASGLPAVAATTPSTAKRPVPEVVVLDLSGDEGSGDKREAGVLESPAKKAKLLEHPLSPQASKTRPIARTTASMAGTXXXXXXXXXATGRAAVSNGSGVDVSSKAGGKGNEVAAGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKATPGPKTGTLDSFWSSG 1136
            PEVKP          S  EGGSG AGAV XXXXXXXXXXXXXXXVQKETDTMTILNQVWKPKNVQVGSKFRASLVR                      PPFGRHLNQVPAGWGPAHDKWLAHAAL+QGWFTSMQKKKAMKIIEDARGLWPGLISMPDHVILGRRLKQLVAKFRTEASRHAAAAKKVERERADAAYKQRKFLADMERQK+KREQEERIRREWQARE XXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEILRAPTQ+QPEQPPVRPYLP GLDASSPNV TVHDARGNIAGYQVWPS+AE QLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     DGREG+ QKVP VGAG AG VG AM GP+SA                AM APPGGLSIAACAAMSDDGIMLRHAVHNLGVPVSMLLSHNP+AGGGSASAYSPLRAVLDMS                                                                               +QSFAARLAQL ELKAAPMPSWWKPAVHDAHLLIASCIYGSSSDYGVDKAMKETTLAMLQENGLAFAAQE+ENN KAGGGPS +K D AGGVAASLVPGCQSAEPMEPLAAMTNPPLT AAAKSRIKALQTAAFVSARHHSSLPAQPQRSAAVSGVN XXXXXXXXX                XXXXX               XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VSS+ NAASGLPAVAATTPSTAKRPVPEVVVLDLSGD+G GDKREAGV ESPAKKAKLLEHPLSPQ SKTRPI   TA MAGT         ATGRAAVSNGSGVDVS KAG  GNEVAAGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   KKATPGPKTGTLDSFWSSG
Sbjct: 1708 PEVKPXXXXXXXXXXSVAEGGSGAAGAVXXXXXXXXXXXXXXXXVQKETDTMTILNQVWKPKNVQVGSKFRASLVR----------------------PPFGRHLNQVPAGWGPAHDKWLAHAALEQGWFTSMQKKKAMKIIEDARGLWPGLISMPDHVILGRRLKQLVAKFRTEASRHAAAAKKVERERADAAYKQRKFLADMERQKVKREQEERIRREWQAREXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEILRAPTQEQPEQPPVRPYLPSGLDASSPNVRTVHDARGNIAGYQVWPSVAERQLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----DGREGVTQKVPFVGAGSAGEVGSAMTGPSSAXXXXXXXXXXXXXXXIAMLAPPGGLSIAACAAMSDDGIMLRHAVHNLGVPVSMLLSHNPSAGGGSASAYSPLRAVLDMS-------------------------------------------------------------------------------IQSFAARLAQLAELKAAPMPSWWKPAVHDAHLLIASCIYGSSSDYGVDKAMKETTLAMLQENGLAFAAQERENN-KAGGGPSTIKADDAGGVAASLVPGCQSAEPMEPLAAMTNPPLTTAAAKSRIKALQTAAFVSARHHSSLPAQPQRSAAVSGVNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSVLNAASGLPAVAATTPSTAKRPVPEVVVLDLSGDDGCGDKREAGVSESPAKKAKLLEHPLSPQVSKTRPIESKTAPMAGTAASSESAAGATGRAAVSNGSGVDVSCKAGENGNEVAAGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--KKATPGPKTGTLDSFWSSG 2583          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1062.577.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHJ8_ECTSI0.000e+075.39CHROMODOMAIN HELICASE DNA BINDING n=1 Tax=Ectocarp... [more]
A0A6H5JB56_9PHAE8.600e-30077.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 357..377
NoneNo IPR availableCOILSCoilCoilcoord: 412..435

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1062contigEcto-sp13_S_contig1062:1275..10932 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1062.577.1mRNA_Ecto-sp13_S_contig1062.577.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1062 1230..11238 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1062.577.1 ID=prot_Ecto-sp13_S_contig1062.577.1|Name=mRNA_Ecto-sp13_S_contig1062.577.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1137bp
MASVGDRSLADVAAVCRAMIAVMLQMEAVHNAQAIVKREREDQIVQRLVA
IGNKAREEATAAAAAAPAAAAAPAPSAAPSAAPSAAAAAAAVAENGAAGS
STAPVPAPAAAAAAPAIAVTASSAAGSSSGDAPAAAPAPATGAGGLGADG
AAGPEVKPAAVASAERAPSAIEGGSGTAGAVVAAAAAAAAAAAAAAVVQK
ETDTMTILNQVWKPKNVQVGSKFRASLVRITSKLSTLDEIDDLRQMLNSH
DPPFGRHLNQVPAGWGPAHDKWLAHAALQQGWFTSMQKKKAMKIIEDARG
LWPGLISMPDHVILGRRLKQLVAKFRTEASRHAAAAKKVERERADAAYKQ
RKFLADMERQKLKREQEERIRREWQAREAKRAQDKAAKQKEASMAAKHAR
DANRTAAVRARAEELANERDRAAAARARLAAAARERNPAASLAEILRAPT
QQQPEQPPVRPYLPPGLDASSPNVMTVHDARGNIAGYQVWPSMAESQLAA
AAAAVAGSASGKDGPTLSSSNGGGGGGSSGGGGGDGREGMAQKVPLVGAG
GAGGVGRAMIGPASAPTPASSSNGSSRAAATAMSAPPGGLSIAACAAMSD
DGIMLRHAVHNLGVPVSMLLSHNPAAGGGSASAYSPLRAVLDMSWLRLAN
GNDLNAKGAESIGVHLLSKAASIVGDNLGLRLPPYPSHPISVSERTTLTA
MLQSAAKATQLRASLLAYTKLKEMQSFAARLAQLTELKAAPMPSWWKPAV
HDAHLLIASCIYGSSSDYGVDKAMKETTLAMLQENGLAFAAQEKENNNKA
GGGPSIVKGDGAGGVAASLVPGCQSAEPMEPLAAMTNPPLTAAAAKSRIK
ALQTAAFVSARHHSSLPAQPQRSAAVSGVNGSGGSTGSSGNTDDCVVVSV
ATSGDGGGAGGGDRVHRPLAGAATGASTAAAAPAVGGGTTAVGTAAAAAA
AGGGGVSSISNAASGLPAVAATTPSTAKRPVPEVVVLDLSGDEGSGDKRE
AGVLESPAKKAKLLEHPLSPQASKTRPIARTTASMAGTAASSESAAGATG
RAAVSNGSGVDVSSKAGGKGNEVAAGEDGGGGAATKTAADGGGKDAAVSE
NGDVSAAGSVAAAAAAAKKATPGPKTGTLDSFWSSG*
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