prot_Ecto-sp13_S_contig10606.566.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10606.566.1
Unique Nameprot_Ecto-sp13_S_contig10606.566.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length97
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10606.566.1 vs. uniprot
Match: A0A6H5K9F0_9PHAE (Cyclin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9F0_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 8.830e-51
Identity = 90/97 (92.78%), Postives = 91/97 (93.81%), Query Frame = 0 
Query:    1 MSELRCLLPRGGEDTDLLCVEVSALGQAPVPATMLPRVSCDGWQQQEKQEVFRDSSADQAHEEFLTSLLAKTNAYRPLETSWQVMENAEFLDMRGAV 97
            MSEL  LLPRG EDTDLLCVEVSALGQAPVPAT LPRVSCDGWQ QEKQEVFRD SADQAHEEFLTSLLAKTNAYRPLETSWQVME+AEFLDMRGAV
Sbjct:    1 MSELSRLLPRGEEDTDLLCVEVSALGQAPVPATRLPRVSCDGWQLQEKQEVFRDGSADQAHEEFLTSLLAKTNAYRPLETSWQVMEDAEFLDMRGAV 97
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10606.566.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K9F0_9PHAE8.830e-5192.78Cyclin N-terminal domain-containing protein n=2 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10606contigEcto-sp13_S_contig10606:4870..5719 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10606.566.1mRNA_Ecto-sp13_S_contig10606.566.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10606 4866..5719 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10606.566.1 ID=prot_Ecto-sp13_S_contig10606.566.1|Name=mRNA_Ecto-sp13_S_contig10606.566.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=97bp
MSELRCLLPRGGEDTDLLCVEVSALGQAPVPATMLPRVSCDGWQQQEKQE
VFRDSSADQAHEEFLTSLLAKTNAYRPLETSWQVMENAEFLDMRGAV
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