prot_Ecto-sp13_S_contig10567.528.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10567.528.1
Unique Nameprot_Ecto-sp13_S_contig10567.528.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length104
Homology
BLAST of mRNA_Ecto-sp13_S_contig10567.528.1 vs. uniprot
Match: D8LCV8_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCV8_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 8.320e-72
Identity = 102/104 (98.08%), Postives = 104/104 (100.00%), Query Frame = 0
Query:    1 MSDYATELLRRQLQELNKNPPEGVSVGLADDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQ 104
            MSDYATELLRRQLQELNKNPPEGVSVGLA+DDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTF+SEMFHPNVYPDGRVCISILHPPGEDKFNEQ
Sbjct:    1 MSDYATELLRRQLQELNKNPPEGVSVGLANDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFISEMFHPNVYPDGRVCISILHPPGEDKFNEQ 104          
BLAST of mRNA_Ecto-sp13_S_contig10567.528.1 vs. uniprot
Match: A0A836CP86_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP86_9STRA)

HSP 1 Score: 187 bits (476), Expect = 3.660e-59
Identity = 85/104 (81.73%), Postives = 94/104 (90.38%), Query Frame = 0
Query:    1 MSDYATELLRRQLQELNKNPPEGVSVGLADDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQ 104
            M+DYATELLRRQL ELN+NPPEGVSVGL DD N++ WELLIVGP DTLYE G FKA LEFPKDFPN+PPTMTF S+M+HPNVY DGRVCISILHPPGED+FN+Q
Sbjct:    1 MTDYATELLRRQLNELNRNPPEGVSVGLVDDSNIYQWELLIVGPPDTLYEEGLFKATLEFPKDFPNSPPTMTFTSDMWHPNVYEDGRVCISILHPPGEDRFNDQ 104          
BLAST of mRNA_Ecto-sp13_S_contig10567.528.1 vs. uniprot
Match: A0A4D9D8W7_9STRA (UBC core domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8W7_9STRA)

HSP 1 Score: 182 bits (462), Expect = 4.790e-57
Identity = 85/104 (81.73%), Postives = 94/104 (90.38%), Query Frame = 0
Query:    1 MSDYATELLRRQLQELNKNPPEGVSVGLADDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQ 104
            M+DYATELL+RQL ELNKNPPEGVSVGL DD ++F WELL+VGPADTLYEGGFFKA+L FP DFPN PPTMTF +EM+HPNVY DGRVCISILHPPGED+FN Q
Sbjct:    1 MTDYATELLKRQLHELNKNPPEGVSVGLVDD-SVFEWELLLVGPADTLYEGGFFKARLTFPSDFPNMPPTMTFQTEMWHPNVYEDGRVCISILHPPGEDRFNSQ 103          
BLAST of mRNA_Ecto-sp13_S_contig10567.528.1 vs. uniprot
Match: A0A024UPR9_9STRA (UBC core domain-containing protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024UPR9_9STRA)

HSP 1 Score: 175 bits (443), Expect = 3.740e-54
Identity = 78/102 (76.47%), Postives = 89/102 (87.25%), Query Frame = 0
Query:    3 DYATELLRRQLQELNKNPPEGVSVGLADDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQ 104
            DY  ELLRRQ  EL++NPPEGVSVGL DD+N+F WE+++VGP DTLYEG FFKA+LEFPKDFPN PP MTFVSEM+HPNVYP+G VCISILHPPGED+ N Q
Sbjct:    2 DYGRELLRRQFTELSRNPPEGVSVGLGDDENLFNWEIMLVGPPDTLYEGAFFKARLEFPKDFPNMPPKMTFVSEMWHPNVYPNGVVCISILHPPGEDRMNAQ 103          
BLAST of mRNA_Ecto-sp13_S_contig10567.528.1 vs. uniprot
Match: A0A067CW50_SAPPC (UBC core domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CW50_SAPPC)

HSP 1 Score: 175 bits (443), Expect = 3.740e-54
Identity = 77/102 (75.49%), Postives = 90/102 (88.24%), Query Frame = 0
Query:    3 DYATELLRRQLQELNKNPPEGVSVGLADDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQ 104
            DY  ELLRRQL EL++NPPEGVSVGL DD+N+F WE+++VGP DTLYEGGFF+A+LEFPKDFPN PP MTF+S+M+HPNVYP G VCISILHPPGED+ N Q
Sbjct:    2 DYGRELLRRQLTELSRNPPEGVSVGLGDDENIFHWEIMLVGPPDTLYEGGFFRARLEFPKDFPNMPPKMTFISDMWHPNVYPSGVVCISILHPPGEDQMNAQ 103          
BLAST of mRNA_Ecto-sp13_S_contig10567.528.1 vs. uniprot
Match: A0A7S2AVY1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AVY1_9STRA)

HSP 1 Score: 172 bits (437), Expect = 4.320e-53
Identity = 75/101 (74.26%), Postives = 89/101 (88.12%), Query Frame = 0
Query:    4 YATELLRRQLQELNKNPPEGVSVGLADDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQ 104
            Y  ELLRRQL +LN+NPP+GVSVGL DDDN+ +WE++++GP++T+YEGGFFKA LEFP DFPN PP M FVSEM+HPNVY DGRVCISILHPPGEDK+N Q
Sbjct:   14 YCIELLRRQLADLNRNPPDGVSVGLVDDDNIMIWEIMLIGPSETMYEGGFFKATLEFPPDFPNMPPEMRFVSEMWHPNVYADGRVCISILHPPGEDKYNAQ 114          
BLAST of mRNA_Ecto-sp13_S_contig10567.528.1 vs. uniprot
Match: A0A1Z5JLS8_FISSO (Ubiquitin-conjugating enzyme E2 G1 n=7 Tax=Bacillariophyta TaxID=2836 RepID=A0A1Z5JLS8_FISSO)

HSP 1 Score: 171 bits (434), Expect = 9.030e-53
Identity = 80/104 (76.92%), Postives = 89/104 (85.58%), Query Frame = 0
Query:    1 MSDYATELLRRQLQELNKNPPEGVSVGLADDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQ 104
            MSDY TELLRRQL +L KNP + VSVGL DD N++ WE+LI+GP  TLYEGGFFKAKL FP DFPN PPTMTF SEM+HPNVY DGRVCISILHPPGED+FN+Q
Sbjct:    1 MSDYGTELLRRQLTDLAKNPIDLVSVGLVDDSNVYEWEILIMGPDGTLYEGGFFKAKLVFPPDFPNMPPTMTFTSEMWHPNVYTDGRVCISILHPPGEDEFNQQ 104          
BLAST of mRNA_Ecto-sp13_S_contig10567.528.1 vs. uniprot
Match: A0A7S2RLK2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLK2_9STRA)

HSP 1 Score: 171 bits (432), Expect = 3.500e-52
Identity = 77/100 (77.00%), Postives = 86/100 (86.00%), Query Frame = 0
Query:    4 YATELLRRQLQELNKNPPEGVSVGLADDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNE 103
            YA ELLRRQL E+N+NPP+GVSVGLADD N+F WEL+IVGPADTLYEGGFFKA L+FP DFPN PP M F S M+HPNV+PDG+VCISILH PGED  NE
Sbjct:   25 YAIELLRRQLHEMNRNPPDGVSVGLADDSNLFKWELMIVGPADTLYEGGFFKATLDFPPDFPNMPPEMAFTSPMWHPNVFPDGKVCISILHAPGEDPHNE 124          
BLAST of mRNA_Ecto-sp13_S_contig10567.528.1 vs. uniprot
Match: A0A8K1CH94_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CH94_PYTOL)

HSP 1 Score: 169 bits (429), Expect = 5.370e-52
Identity = 75/102 (73.53%), Postives = 89/102 (87.25%), Query Frame = 0
Query:    2 SDYATELLRRQLQELNKNPPEGVSVGLADDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNE 103
            +DYA ELL+RQ  E++KNPPEGVSVGL DD+N+F WE+L++GP DTLYEGGFFKA LEFP +FPN PP MTF SEM+HPNVYP+G VCISILHPPGED+ N+
Sbjct:    3 TDYARELLKRQFIEMSKNPPEGVSVGLGDDENIFRWEILLIGPPDTLYEGGFFKAVLEFPPNFPNMPPKMTFTSEMWHPNVYPNGIVCISILHPPGEDQLNQ 104          
BLAST of mRNA_Ecto-sp13_S_contig10567.528.1 vs. uniprot
Match: A0A7S0XFZ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XFZ8_9STRA)

HSP 1 Score: 167 bits (423), Expect = 4.260e-51
Identity = 75/104 (72.12%), Postives = 88/104 (84.62%), Query Frame = 0
Query:    1 MSDYATELLRRQLQELNKNPPEGVSVGLADDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQ 104
            MS Y  ELLRRQL +L++NPP+GVSVGL +DDN+F WE++IVGP DTLYEGG FKA L+FP+DFPNNPP M F S M+HPNV+ DG+VCISILHPPG D FNEQ
Sbjct:    7 MSTYGGELLRRQLIDLSRNPPDGVSVGLREDDNIFHWEVMIVGPPDTLYEGGLFKATLDFPEDFPNNPPVMAFTSAMWHPNVFADGKVCISILHPPGVDHFNEQ 110          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10567.528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCV8_ECTSI8.320e-7298.08UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CP86_9STRA3.660e-5981.73Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
A0A4D9D8W7_9STRA4.790e-5781.73UBC core domain-containing protein n=1 Tax=Nannoch... [more]
A0A024UPR9_9STRA3.740e-5476.47UBC core domain-containing protein n=7 Tax=Saprole... [more]
A0A067CW50_SAPPC3.740e-5475.49UBC core domain-containing protein n=3 Tax=Saprole... [more]
A0A7S2AVY1_9STRA4.320e-5374.26Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A1Z5JLS8_FISSO9.030e-5376.92Ubiquitin-conjugating enzyme E2 G1 n=7 Tax=Bacilla... [more]
A0A7S2RLK2_9STRA3.500e-5277.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8K1CH94_PYTOL5.370e-5273.53Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S0XFZ8_9STRA4.260e-5172.12Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 7..103
e-value: 9.7E-19
score: 78.2
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 1..99
NoneNo IPR availablePANTHERPTHR24067:SF237UBIQUITIN-CONJUGATING ENZYME E2 13-RELATEDcoord: 1..99
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 9..94
e-value: 5.4E-33
score: 113.6
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 7..104
score: 28.811
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 2..104
e-value: 4.0E-43
score: 149.0
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 5..101
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 78..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10567contigEcto-sp13_S_contig10567:36..2758 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10567.528.1mRNA_Ecto-sp13_S_contig10567.528.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10567 36..2758 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10567.528.1 ID=prot_Ecto-sp13_S_contig10567.528.1|Name=mRNA_Ecto-sp13_S_contig10567.528.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=104bp
MSDYATELLRRQLQELNKNPPEGVSVGLADDDNMFMWELLIVGPADTLYE
GGFFKAKLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDK
FNEQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
IPR023313UBQ-conjugating_AS