prot_Ecto-sp13_S_contig10527.500.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10527.500.1
Unique Nameprot_Ecto-sp13_S_contig10527.500.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length470
Homology
BLAST of mRNA_Ecto-sp13_S_contig10527.500.1 vs. uniprot
Match: D7FLZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLZ7_ECTSI)

HSP 1 Score: 746 bits (1927), Expect = 1.420e-263
Identity = 422/466 (90.56%), Postives = 436/466 (93.56%), Query Frame = 0
Query:    1 VQLGRFVEALRSVEAVLGRRKGTADDYVLRAKIRWAVGMVGPGNIDLGIAKTLQSDHPEVVMFGRRCLGNAEGLYAKAKELADAGDDVRAVKVLNQVADFTPEDVKVPIMRAACKRRLKDFVGALQDYDECSFRHFREVHVGRRALDQAASKLRSRVISRRGEDTGGLGVAVPGGLGRGAGREGARGGGDVVLAAASGQVADGENTTGVENSASDALAGGGDVGKVSGKEREQDTPADVGETKRGGGGGDGDNAKVEPGRAAGSESPFPPLSESVNTAERETNPPRISTTEASRIEEDMEMQVDCERLADEELRRRFRLAIPHAGPDPTYTLRRLEPQXXXXXXXXXXXXXXXXXXXXXXXLSSTLSGGIPSEGKGGLLNTAIIEGERGQKSQGEGKEREGYSEPPYITRQRCLVLNDWALSLFEVGEYEKAVYALDLAIDGDRASALATGGAMESKFFLNRQGIC 466
            V+LGRFVEALRSVEAVLGRRKGTADDYVLRAKIRWAVGMVGPGNIDLGIAKTLQSDHPEVVMFGRRCLGNAEGLYAKAKELADAGDDVRAVK+LNQVAD TPEDVKVPIMRAACKRRLKDF GAL DYDECSFRHFREVHVGRRALD+AAS+LRSR  SRRGEDTG LGVAVPGGLG GAG EGAR GGDVVLAAASGQV DGENT GVENSASDALAGGGDVGKV+G++ EQDTPA V ETKRGGGGGDG+NA VEPGRA  SESPFPPLSES+NTAER T+PPR+STTEASRI+EDMEMQVDCERLADEELRR FRLAIPHAGPDPTYTLR  +PQ XXXXXXXXXXXXXXXXXXXXXX SS  SGGIPSEGKGGLL T IIEGERGQ+SQGEGKEREGYSEPPYITRQRCLVLNDWALSLFE GEYEKAVYALDLAIDGDRASALATGGAMESKFFLNR G C
Sbjct:  275 VKLGRFVEALRSVEAVLGRRKGTADDYVLRAKIRWAVGMVGPGNIDLGIAKTLQSDHPEVVMFGRRCLGNAEGLYAKAKELADAGDDVRAVKILNQVADLTPEDVKVPIMRAACKRRLKDFAGALCDYDECSFRHFREVHVGRRALDRAASRLRSRASSRRGEDTGRLGVAVPGGLGGGAGIEGARAGGDVVLAAASGQVVDGENTEGVENSASDALAGGGDVGKVTGEKGEQDTPAGVRETKRGGGGGDGENATVEPGRAGVSESPFPPLSESINTAERGTDPPRLSTTEASRIQEDMEMQVDCERLADEELRRMFRLAIPHAGPDPTYTLRPFQPQQXXXXXXXXXXXXXXXXXXXXXXXSSAPSGGIPSEGKGGLLKTVIIEGERGQQSQGEGKEREGYSEPPYITRQRCLVLNDWALSLFEFGEYEKAVYALDLAIDGDRASALATGGAMESKFFLNR-GDC 739          
BLAST of mRNA_Ecto-sp13_S_contig10527.500.1 vs. uniprot
Match: A0A6H5K7M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M7_9PHAE)

HSP 1 Score: 253 bits (646), Expect = 1.180e-78
Identity = 155/164 (94.51%), Postives = 157/164 (95.73%), Query Frame = 0
Query:  301 MQVDCERLADEELRRRFRLAIPHAGPDPTYTLRRLEPQXXXXXXXXXXXXXXXXXXXXXXXLSSTLSGGIPSEGKGGLLNTAIIEGERGQKSQGEGKEREGYSEPPYITRQRCLVLNDWALSLFEVGEYEKAVYALDLAIDGDRASALATGGAMESKFFLNRQG 464
            M+VDCERLADEELRRRFRLAIPHAGPDPTY LR LEPQ XXXXXXXXXXXXXXXXXXXXXXLSSTLSGGIPSEG GGLL T IIEGERGQ+SQ EGKEREGYSEPPYITRQRCLVLNDWALSLFEVGEYEKAVYALDLAIDGDRASALATGGAMESKFFLNRQG
Sbjct:    4 MRVDCERLADEELRRRFRLAIPHAGPDPTYILRSLEPQQXXXXXXXXXXXXXXXXXXXXXXLSSTLSGGIPSEGNGGLLKTVIIEGERGQQSQAEGKEREGYSEPPYITRQRCLVLNDWALSLFEVGEYEKAVYALDLAIDGDRASALATGGAMESKFFLNRQG 167          
BLAST of mRNA_Ecto-sp13_S_contig10527.500.1 vs. uniprot
Match: A0A6H5K4B5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4B5_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 3.350e-50
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0
Query:    1 VQLGRFVEALRSVEAVLGRRKGTADDYVLRAKIRWAVGMVGPGNIDLGIAKTLQSDHPEVVMFGRRCLGNAEGLYAKAKELADAGDDVRAVKV 93
            V+LGRFVEALRSVEAVLGRRKGTADDYVLRAKIRWAVGMVGPGNIDLGIAKTLQSDHPEVVMFGRRCLGNAEGLYAKAKELADAGDDVRAVKV
Sbjct:  297 VKLGRFVEALRSVEAVLGRRKGTADDYVLRAKIRWAVGMVGPGNIDLGIAKTLQSDHPEVVMFGRRCLGNAEGLYAKAKELADAGDDVRAVKV 389          
BLAST of mRNA_Ecto-sp13_S_contig10527.500.1 vs. uniprot
Match: F0YK37_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK37_AURAN)

HSP 1 Score: 58.9 bits (141), Expect = 1.780e-5
Identity = 37/128 (28.91%), Postives = 60/128 (46.88%), Query Frame = 0
Query:   24 ADDYVLRAKIRWAVGMVGPGNIDLGIAKTLQSDHPEVVMFGRRCLGNAEGLYAKAKELADAGDDVRAVKVLNQVADFTPEDVKVPIMRAACKRRLKDFVGALQDYDECSFRHFREVHVGRRALDQAAS 151
            A+ +VLRAK+ WA+G++  G  D+ +A +L  DH EV  F       +  LY  A       D   A+K+L       P D+K+ + RA+  R+      AL D  + S      +    R +++ A+
Sbjct:  164 AEQFVLRAKLYWALGLIDVGIKDMSMAMSLAPDHIEVRRFNDMMQRKSAELYRTALNHMMHHDFSSAIKLLTAALRIAPRDIKLLVTRASAHRQAGACDIALVDLSQASTAFCHSMRPSSRTVEEQAN 291          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10527.500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FLZ7_ECTSI1.420e-26390.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7M7_9PHAE1.180e-7894.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4B5_9PHAE3.350e-5098.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0YK37_AURAN1.780e-528.91Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..151
e-value: 2.7E-6
score: 28.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 70..441
NoneNo IPR availablePANTHERPTHR45153FAMILY NOT NAMEDcoord: 2..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10527contigEcto-sp13_S_contig10527:14..5781 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10527.500.1mRNA_Ecto-sp13_S_contig10527.500.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10527 14..5781 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10527.500.1 ID=prot_Ecto-sp13_S_contig10527.500.1|Name=mRNA_Ecto-sp13_S_contig10527.500.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=470bp
VQLGRFVEALRSVEAVLGRRKGTADDYVLRAKIRWAVGMVGPGNIDLGIA
KTLQSDHPEVVMFGRRCLGNAEGLYAKAKELADAGDDVRAVKVLNQVADF
TPEDVKVPIMRAACKRRLKDFVGALQDYDECSFRHFREVHVGRRALDQAA
SKLRSRVISRRGEDTGGLGVAVPGGLGRGAGREGARGGGDVVLAAASGQV
ADGENTTGVENSASDALAGGGDVGKVSGKEREQDTPADVGETKRGGGGGD
GDNAKVEPGRAAGSESPFPPLSESVNTAERETNPPRISTTEASRIEEDME
MQVDCERLADEELRRRFRLAIPHAGPDPTYTLRRLEPQQQQEKEQAPPQR
LSREQQQQNVLLSSTLSGGIPSEGKGGLLNTAIIEGERGQKSQGEGKERE
GYSEPPYITRQRCLVLNDWALSLFEVGEYEKAVYALDLAIDGDRASALAT
GGAMESKFFLNRQGICCLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf