prot_Ecto-sp13_S_contig10486.462.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10486.462.1
Unique Nameprot_Ecto-sp13_S_contig10486.462.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length219
Homology
BLAST of mRNA_Ecto-sp13_S_contig10486.462.1 vs. uniprot
Match: A0A6H5L2J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2J8_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 1.360e-84
Identity = 189/211 (89.57%), Postives = 193/211 (91.47%), Query Frame = 0
Query:    1 MKQEMNRSSEDYEHSMARFLQLKRNSEEGVTQQARAAEVALSKKKFEMARFDFVHHLSQLETKKKHEVVGRTCTALHAFLALFERCNGLVASTEQRLRELECALTLSRQASS---KEDGVWLARRDQLEASLNKAIPPNAALVARSGGGLPPAXXXXXXXXXXXXXXXXXXXXTSTWPXXXXXXXXXXXXXXXXXXXXXXAVTRLSPVPGP 208
            MKQEMNRS EDYEHSMARFLQLKRNSEEGVTQ AR+AEVALSKK+FEMARFDFVHHLSQLETKKKHEVVGRTCTALHAFLALF+RCNGLVASTEQRLRELECALTLSRQASS   KE+GVWLARRDQLEASLNKAIPPNAALVARSGGGLPPA   XXXXXXXXXXX      TSTWP XXXXXXXXXXXXXXXXXXXX AVT LSPV GP
Sbjct:  118 MKQEMNRSCEDYEHSMARFLQLKRNSEEGVTQ-ARSAEVALSKKRFEMARFDFVHHLSQLETKKKHEVVGRTCTALHAFLALFQRCNGLVASTEQRLRELECALTLSRQASSDLDKEEGVWLARRDQLEASLNKAIPPNAALVARSGGGLPPAPSPXXXXXXXXXXXMGSTATTSTWPSXXXXXXXXXXXXXXXXXXXXAAVTGLSPVSGP 327          
BLAST of mRNA_Ecto-sp13_S_contig10486.462.1 vs. uniprot
Match: D7FVG0_ECTSI (Centaurin, beta 5, isoform CRA_a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVG0_ECTSI)

HSP 1 Score: 258 bits (659), Expect = 4.910e-79
Identity = 138/149 (92.62%), Postives = 141/149 (94.63%), Query Frame = 0
Query:    1 MKQEMNRSSEDYEHSMARFLQLKRNSEEGVTQQARAAEVALSKKKFEMARFDFVHHLSQLETKKKHEVVGRTCTALHAFLALFERCNGLVASTEQRLRELECALTLSRQASSKEDGVWLARRDQLEASLNKAIPPNAALVARSGGGLPP 149
            MKQEMNRS EDYEHSMARFLQLKRNSEEGVTQ ARAAEVALSKK+FEMARFD V HLS LETKKKHEVVGRTCTALHAFLALF+RCNGLVASTEQRLRELECALTLSRQ   +EDGVWLARRDQLEASLNKAIPPNAALVARSGGGLPP
Sbjct:    1 MKQEMNRSCEDYEHSMARFLQLKRNSEEGVTQ-ARAAEVALSKKRFEMARFDLVRHLSLLETKKKHEVVGRTCTALHAFLALFQRCNGLVASTEQRLRELECALTLSRQDLDQEDGVWLARRDQLEASLNKAIPPNAALVARSGGGLPP 148          
BLAST of mRNA_Ecto-sp13_S_contig10486.462.1 vs. uniprot
Match: A0A835ZCL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCL2_9STRA)

HSP 1 Score: 110 bits (276), Expect = 2.180e-24
Identity = 68/169 (40.24%), Postives = 99/169 (58.58%), Query Frame = 0
Query:    1 MKQEMNRSSEDYEHSMARFLQLKRNSEEGVTQQARAAE------VALSKKKFEMARFDFVHHLSQLETKKKHEV------------------------------VGRTCTALHAFLALFERCNGLVASTEQRLRELECALTLSRQASSKEDGVWLARRDQLEASLNKAI 133
            MKQE++R+SEDYE  + + LQLKRNSE+   Q   A        VA ++++FE++RFD VHHL+QLETKKK ++                              V R C+AL+AFL  F +C+ LVA+ E  +R+L+ AL L+R+  +K+D +W A+R QLE  LN+ +
Sbjct:  462 MKQEVSRASEDYEAHLFKLLQLKRNSEDAQFQVRSAXXXXXXXXVAATRRRFELSRFDLVHHLNQLETKKKFQLAVGQRLARQNKKRGTLSTGDAQRLAFAVDEVERVCSALYAFLGYFHQCHTLVATVEPSMRDLQHALHLARKDFAKDDRLWTAKRMQLEMQLNRQV 630          
BLAST of mRNA_Ecto-sp13_S_contig10486.462.1 vs. uniprot
Match: A0A7R9YAC1_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAC1_9STRA)

HSP 1 Score: 101 bits (252), Expect = 3.340e-21
Identity = 56/132 (42.42%), Postives = 86/132 (65.15%), Query Frame = 0
Query:    1 MKQEMNRSSEDYEHSMARFLQLKRNSEEGVTQQARAAEVALSKKKFEMARFDFVHHLSQLETKKKHEVVGRTCTALHAFLALFERCNGLVASTEQRLRELECALTLSRQASSKEDGVWLARRDQLEASLNKA 132
            MK E  RS E++E  + + LQL+ +++  V  Q + A  A S K+ E+ARFD VH L+QLE KKK ++V R C  L+A L  F +C+ ++A+ E R+R+L+ AL L+R+  +  D +W A+R QLE  L++A
Sbjct:  277 MKVESQRSLEEHEQDLGKLLQLRNDADAAVVSQRKQAASA-SYKRHELARFDLVHELNQLEMKKKFQLVERVCNGLYAELGYFHQCHIVMANMEPRMRDLQLALQLARKKFAGADRIWAAKRKQLEIKLDRA 407          
BLAST of mRNA_Ecto-sp13_S_contig10486.462.1 vs. uniprot
Match: A0A7S1U8B4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8B4_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 3.230e-18
Identity = 53/145 (36.55%), Postives = 88/145 (60.69%), Query Frame = 0
Query:    1 MKQEMNRSSEDYEHSMARFLQLKRNSEEGVTQQARAAEVALSKKKFEMARFDFVHHLSQLETKKKHEVVGRTCTALHAFLALFERCNGLVASTEQRLRELECALTLSRQASSKEDGVWLARRDQLEASLNKAIPPNAALVARSGG 145
            +K E + S  ++E ++AR LQL  +++  +   AR    + S K+ E+ARFD VH L+QLE +KK ++  R C  L+A L  F +C+ ++A+ E  +R+++ AL+++R+  +  D +WLA+R QLE  L+   P   A   R GG
Sbjct:  213 LKAEHSASLLEHETNLARLLQLHNDADADMVA-ARQDAASASFKRHELARFDLVHELNQLEMRKKFQIAERVCNGLYADLGFFHQCHIVMATLEPSMRDMQHALSVARKKFAGHDRIWLAKRKQLELRLDSIDPTPNAASTRDGG 356          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10486.462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L2J8_9PHAE1.360e-8489.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVG0_ECTSI4.910e-7992.62Centaurin, beta 5, isoform CRA_a n=1 Tax=Ectocarpu... [more]
A0A835ZCL2_9STRA2.180e-2440.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9YAC1_9STRA3.340e-2142.42Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1U8B4_9STRA3.230e-1836.55Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF16746BAR_3coord: 2..109
e-value: 4.9E-10
score: 39.5
NoneNo IPR availablePANTHERPTHR23180CENTAURIN/ARFcoord: 2..129
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60coord: 1..135
e-value: 1.6E-16
score: 62.7
IPR027267AH/BAR domain superfamilySUPERFAMILY103657BAR/IMD domain-likecoord: 1..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10486contigEcto-sp13_S_contig10486:1149..2973 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10486.462.1mRNA_Ecto-sp13_S_contig10486.462.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10486 1149..5554 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10486.462.1 ID=prot_Ecto-sp13_S_contig10486.462.1|Name=mRNA_Ecto-sp13_S_contig10486.462.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=219bp
MKQEMNRSSEDYEHSMARFLQLKRNSEEGVTQQARAAEVALSKKKFEMAR
FDFVHHLSQLETKKKHEVVGRTCTALHAFLALFERCNGLVASTEQRLREL
ECALTLSRQASSKEDGVWLARRDQLEASLNKAIPPNAALVARSGGGLPPA
PSPTRAAAAVAAMAMSSNATTSTWPSSATSSTAGGGGLGSTAGAGGAAVT
RLSPVPGPRRRRRPREGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027267AH/BAR_dom_sf