prot_Ecto-sp13_S_contig1035.345.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1035.345.1
Unique Nameprot_Ecto-sp13_S_contig1035.345.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length215
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1035.345.1 vs. uniprot
Match: D8LCQ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCQ3_ECTSI)

HSP 1 Score: 379 bits (973), Expect = 2.050e-130
Identity = 185/214 (86.45%), Postives = 187/214 (87.38%), Query Frame = 0 
Query:    1 MCARYRGYHQRIRELMGDSATVVMNTGSMITEKALTDALGRDVVWNVLENSRSSLEKDFGKVATTFTPIAKKVTTTXXXKKTWKMMLGCGGDANAVEGPKVVEGTPPAAPPHVQGRAGFMVHGATRLSYEEICHWVNQLEDGGWSHVYLTDKIYDPASDNIAHHNPWDAVPTYWTDLAKAVGEISGAVRRDXXXXXXXXXXXXXXXXXKAAVSS 214
            MCARYRGYHQRIRELMGDSATVVMNTGSMITEKALTDALG DVVWNVLENSRSSLEKDFGKVATTFTPI KKVT T   KKTWKMMLGCGGDANAVEGPKVVEGTPPAAPPHVQGRAGFMVHGA R+SYEEICHWVNQLEDGGWSHVY+TDKIYDP SDN AHHNPWDAVPTYW DLAKAVGEISGAVRRD                 KAAVSS
Sbjct:  120 MCARYRGYHQRIRELMGDSATVVMNTGSMITEKALTDALGPDVVWNVLENSRSSLEKDFGKVATTFTPITKKVTATTKKKKTWKMMLGCGGDANAVEGPKVVEGTPPAAPPHVQGRAGFMVHGAARMSYEEICHWVNQLEDGGWSHVYMTDKIYDPDSDNPAHHNPWDAVPTYWADLAKAVGEISGAVRRDFDDGKIPPTTAGSSSSSKAAVSS 333
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1035.345.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCQ3_ECTSI2.050e-13086.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021986Spherulation-specific family 4PFAMPF12138Spherulin4coord: 2..181
e-value: 8.2E-14
score: 51.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1035contigEcto-sp13_S_contig1035:59..2286 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1035.345.1mRNA_Ecto-sp13_S_contig1035.345.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1035 2..4279 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1035.345.1 ID=prot_Ecto-sp13_S_contig1035.345.1|Name=mRNA_Ecto-sp13_S_contig1035.345.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=215bp
MCARYRGYHQRIRELMGDSATVVMNTGSMITEKALTDALGRDVVWNVLEN
SRSSLEKDFGKVATTFTPIAKKVTTTKKKKKTWKMMLGCGGDANAVEGPK
VVEGTPPAAPPHVQGRAGFMVHGATRLSYEEICHWVNQLEDGGWSHVYLT
DKIYDPASDNIAHHNPWDAVPTYWTDLAKAVGEISGAVRRDDDDGKIPPT
TAGSSSSSKAAVSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021986Spherulin4