prot_Ecto-sp13_S_contig10280.290.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10280.290.1
Unique Nameprot_Ecto-sp13_S_contig10280.290.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length851
Homology
BLAST of mRNA_Ecto-sp13_S_contig10280.290.1 vs. uniprot
Match: A0A6H5L1A1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1A1_9PHAE)

HSP 1 Score: 818 bits (2112), Expect = 3.260e-276
Identity = 464/625 (74.24%), Postives = 483/625 (77.28%), Query Frame = 0
Query:    2 LNRLRAERIKCLEERLVEIHAIKDAAAAYDGPPTPTVAAASTAHIKRAAASRTPAKTSAGGAGAGNDGDPNTSPSGVGPGEHGGTGVANAEQRALFPAAGQLGRGGETVHHSERDSYEHAFRRGGGVDRLSFHAPSPSPSATTKSAGINGSKSRGRRQAVAA--DARAGDMWESVRNKDDEILENFLTRHTRDAFELLGGKERLAHARTSGVYENEEGPGGARLCDADSGWSSRLLWALFRQFSDCSLPSPTSPQRWSKPFTAGSVSRETATTNDFSDVCGSPREPSASSIEPPAGCDGAPERRMSLTAFLGVCRSAGLILPADGGGGMVGGGRANRRGGEGPGRGRRQGGGGRVSEGSCEGGRWAGRERRSAQKKAEKGVAEVPADKLFRLDPSEAARIFTRTIRTYGSMGSGAHHRTATCNDHERDSTAQYCGHCRVKSPRDGRRKATHGEDLRSPGDAKAFPPRHHLQRTKHIKRMRPSREQRASESGRSRRKSRCLPPEGLNFRQFETALEGVLEVLTVGSREPCVGRGGVGREDDGENNIVGYGGIGEGREGDVASVVGGGNAIPQRMVAMAPRHAMAGVVQLAKELATKELLARDCHARETLALLDPSLQYILDVNEQI 624
            L+RLRAER KCLEE L EIHAIKDA AA+DGPPTPTVAAA+TA+IKRAAASRTPAKT AGGAGAGNDGDP TSPS  GPGEHGGTGVANAEQRA F AAGQLGR G T+HHSERDS EH FR GGG DRLSFHA SPS SATTKS+GINGS SRGRRQA AA  DARAGD+WESVRNKDD ILENFLTRHTR+ FELLGGK RLAHAR SGV ENEEGPGGAR  DADSGW S LLWALFR FSD SLPSPTSPQRWSKP TAGSVSRETATTNDFSDV GSPREP+ASSIEPP GCDG PERRMSL AFL VCRSAGLI PA GGGGM                                                             RLDPSEAARIFTRT+  YGSMGSGAHH TATCNDHERDSTAQ+C H R KSPRDGRRKA HG+D +SPGD KA P R HLQRTKHIKR+RP  EQRASESGRSRR SR LPPEGLNFRQFETALEGVLEVL V S +PC G GG       ENNIVG+GG  EG EGD+ SVVGGG  I QR V MAPR AMA VVQLAKELATK+LLARDCHARETLALLDPSLQ ILDVNEQ+
Sbjct:  912 LSRLRAERTKCLEECLGEIHAIKDATAAFDGPPTPTVAAATTAYIKRAAASRTPAKTRAGGAGAGNDGDPKTSPSVNGPGEHGGTGVANAEQRASFLAAGQLGREGGTIHHSERDSSEHVFRGGGGDDRLSFHAASPSLSATTKSSGINGSGSRGRRQAAAAAADARAGDVWESVRNKDDAILENFLTRHTRETFELLGGKARLAHARASGVCENEEGPGGARF-DADSGWGSSLLWALFRHFSDFSLPSPTSPQRWSKPVTAGSVSRETATTNDFSDVRGSPREPTASSIEPPVGCDGVPERRMSLMAFLLVCRSAGLIWPAGGGGGMX------------------------------------XXXXXXXXXXXXXXXXXXXXXXXRRLDPSEAARIFTRTMIIYGSMGSGAHHHTATCNDHERDSTAQHCDHRRAKSPRDGRRKAAHGKDQQSPGDFKASPARRHLQRTKHIKRIRPFDEQRASESGRSRRNSRRLPPEGLNFRQFETALEGVLEVLAVDSGQPCFGCGGXXXXXXSENNIVGFGGTSEGGEGDIGSVVGGGKTIRQRTVRMAPRLAMASVVQLAKELATKDLLARDCHARETLALLDPSLQCILDVNEQV 1499          
BLAST of mRNA_Ecto-sp13_S_contig10280.290.1 vs. uniprot
Match: D7FID5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FID5_ECTSI)

HSP 1 Score: 716 bits (1849), Expect = 1.730e-240
Identity = 430/708 (60.73%), Postives = 442/708 (62.43%), Query Frame = 0
Query:    1 RLNRLRAERIKCLEERLVEIHAIKDAAAAYDGPPTPTVAAASTAHIKRAAASRTPAKTSAGGAGAGNDGDPNTSPSGVGPGEHGGTGVANAEQRALFPAAGQLGRGGETVHHSERDSYEHAFRRGGGVDRLSFHAPSPSPSATTKSAGINGSKSRGRRQAVAADARAGDMWESVRNKDDEILENFLTRHTRDAFELLGGKERLAHARTSGVYENEEGPGGARLCDADSGWSSRLLWALFRQFSDCSLPSPTSPQRWSKPFTAGSVSRETATTNDFSDVCGSPREPSASSIEPPAGCDGAPERRMSLTAFLGVCRSAGLILPADGGGGMVGGGRANRRGGEGPGRGRRQGGGGRVSEGSCEGGRWAGRERRSAQKKAEKGVAEVPADKLFRLDPSEAARIFTRTIRTYGSMGSGAHHRTATCNDHERDSTAQYCGHCRVKSPRDGRRKATHGEDLRSPGDAKAFPPRHHLQRTKHIKRMRPSREQRASESGRSRRKSRCLPPEGLNFRQFETALEGVLEVLTVGSREPCVGRGGVGREDDGENNIVGYGGIGEGREGDVASVVGGGNAIPQRMVAMAPRHAMAGVVQLAKELATKELLARDCHARETLALLDPSLQYILDVNEQILHEIFAHYCRRY----------ESITVPGRAVGGSDLGCVGRGGSDGGRSGSDIVLRKAALGLRFEGGRAFAEEFGLTTVLASA 698
            RL+RLRAER KC+EERLVEIHAIKDAAAA DGPPTPTVAAASTAHIK AAASRTPAKT AGGAG GNDGDPN SPS  GPGEHGGTG ANAEQRA F AAGQLGRGG T+H SERD  EHAFR G G DRL+FHAPSPSPSATTKSAGI GS SRGRRQA AADARAGD+WES+RNKDD ILENFLTRHTR AFELLGGK RLAHAR  GVYENEEG GGARLCDADSGW S LLWALFR FSDCSL SPTS QRWSKP TAGSVSRETAT   FSDV GSPREPSASSI+PP                                                                                                                                                                                               RASESGRSRRK+RCLPPEGLNF QFETALEGVLEVLTVGS EPC G GG GREDD E NIVGYGGIGEG EGD+ SVVGGGNAI QR V MA R AMAGVVQLAKELATKELLARDCHARET ALLDPSLQYILDVNEQILHEIFAHYCRRY              VPGRA GGSDLG VGRGG DGGRSGSDIV R+ ALGLRFEGG AFA EFGLTTV+  +
Sbjct:  673 RLSRLRAERNKCVEERLVEIHAIKDAAAACDGPPTPTVAAASTAHIKHAAASRTPAKTRAGGAGTGNDGDPNNSPSVNGPGEHGGTGAANAEQRASFSAAGQLGRGGGTIHRSERDFSEHAFRGGSGDDRLTFHAPSPSPSATTKSAGIKGSGSRGRRQAAAADARAGDVWESIRNKDDAILENFLTRHTRHAFELLGGKARLAHARARGVYENEEGTGGARLCDADSGWGSSLLWALFRHFSDCSLSSPTSLQRWSKPVTAGSVSRETATAKTFSDVRGSPREPSASSIDPP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RASESGRSRRKTRCLPPEGLNFSQFETALEGVLEVLTVGSGEPCFGCGGGGREDDSEKNIVGYGGIGEGGEGDIGSVVGGGNAIRQRTVTMAQRFAMAGVVQLAKELATKELLARDCHARETFALLDPSLQYILDVNEQILHEIFAHYCRRYALSPILPRGDNDSAVPGRAEGGSDLGGVGRGGGDGGRSGSDIVPRRTALGLRFEGGTAFAREFGLTTVVGGS 1189          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10280.290.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L1A1_9PHAE3.260e-27674.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FID5_ECTSI1.730e-24060.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10280contigEcto-sp13_S_contig10280:581..5915 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10280.290.1mRNA_Ecto-sp13_S_contig10280.290.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10280 581..5915 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10280.290.1 ID=prot_Ecto-sp13_S_contig10280.290.1|Name=mRNA_Ecto-sp13_S_contig10280.290.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=851bp
RLNRLRAERIKCLEERLVEIHAIKDAAAAYDGPPTPTVAAASTAHIKRAA
ASRTPAKTSAGGAGAGNDGDPNTSPSGVGPGEHGGTGVANAEQRALFPAA
GQLGRGGETVHHSERDSYEHAFRRGGGVDRLSFHAPSPSPSATTKSAGIN
GSKSRGRRQAVAADARAGDMWESVRNKDDEILENFLTRHTRDAFELLGGK
ERLAHARTSGVYENEEGPGGARLCDADSGWSSRLLWALFRQFSDCSLPSP
TSPQRWSKPFTAGSVSRETATTNDFSDVCGSPREPSASSIEPPAGCDGAP
ERRMSLTAFLGVCRSAGLILPADGGGGMVGGGRANRRGGEGPGRGRRQGG
GGRVSEGSCEGGRWAGRERRSAQKKAEKGVAEVPADKLFRLDPSEAARIF
TRTIRTYGSMGSGAHHRTATCNDHERDSTAQYCGHCRVKSPRDGRRKATH
GEDLRSPGDAKAFPPRHHLQRTKHIKRMRPSREQRASESGRSRRKSRCLP
PEGLNFRQFETALEGVLEVLTVGSREPCVGRGGVGREDDGENNIVGYGGI
GEGREGDVASVVGGGNAIPQRMVAMAPRHAMAGVVQLAKELATKELLARD
CHARETLALLDPSLQYILDVNEQILHEIFAHYCRRYESITVPGRAVGGSD
LGCVGRGGSDGGRSGSDIVLRKAALGLRFEGGRAFAEEFGLTTVLASAQQ
LEDLWDVSYSRQRYGHNHCAVKEPGTASHKIPKAQKEGWKGDSPLQLKIL
SFPGFLDFLGRFALRYSHTAAACDTKQSEATSLVRGDRRLFPSSSHHASG
GGYIGACGGHEPASATAFAEADGTDHENYVNVEQGTSYGRSQNNSSPELC
A
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