prot_Ecto-sp13_S_contig100237.43.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig100237.43.1
Unique Name	prot_Ecto-sp13_S_contig100237.43.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	63

Homology

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig100237.43.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig100237.43.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29

ZOOM

x 1

POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 1..60 e-value: 3.5E-9 score: 38.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 14..58
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 21..54 score: 8.142

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig100237	contig	Ecto-sp13_S_contig100237:319..507 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig100237.43.1	mRNA_Ecto-sp13_S_contig100237.43.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig100237 319..507 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig100237.43.1 ID=prot_Ecto-sp13_S_contig100237.43.1|Name=mRNA_Ecto-sp13_S_contig100237.43.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=63bp
GATAASDALSRLSTKADPSHAHAWQAWGLMETRAGNFKVARSLWERGLKA
NPTHGPLWQVGW*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR019734	TPR_repeat