prot_Ecto-sp13_S_contig1.11.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1.11.1
Unique Nameprot_Ecto-sp13_S_contig1.11.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length570
Homology
BLAST of mRNA_Ecto-sp13_S_contig1.11.1 vs. uniprot
Match: D7G1Z2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Z2_ECTSI)

HSP 1 Score: 848 bits (2192), Expect = 4.840e-306
Identity = 494/573 (86.21%), Postives = 509/573 (88.83%), Query Frame = 0
Query:    1 MPSIAGFIQSLLSEDMYATGMLEKMDERISQLNAGQLRLLIIFVEKKVTGLTNPTVLDAYTKLLRKATVEREKRHEEEVHGERERLKQLKAAHAGVNAKAWDTSHASLDKELAKFQKFLKSKARRIAEEQVLQEEMEKLHNQLMALPARRAAAETKRHAWWACGAVLFAVVGPMLILTLAPVGVLIAVGAFLATCVLAAVCWFVGVLRGIVVTPALDDDAIEDKTRKRAKETLKGYRAEVRRTFEATEEIFAADMKWRDDWAEARKKERXXXXXXXXXXXLKEXXXXXXXXAESRAQGDDRPFWAGDARTFPDEEEEQGVNSDGCSSVGRAGPEAEEKNSSREPXXXXGGGDKGHGSPGTGPRRPSERKVVDAGADGAGLAPSYSRGVVEDRALSTPPRSKTDSSSRPKNVKLDESDARGGSVGGSDAAPAPVKGGPAGETSLESSARRRSPGDGDSRGLTEEEASSQGEASGNGLLRGPYQGPSSLLEKRSQGLEEXXXXXXX----HNQVALPMAGYSSATSGGALSGGVVQETGLPSLGGNAAAVNGAGTGGLNGMTLSVDDEGKGDMAV 569
            MPSIAGFIQSLLSEDMYATGMLEKMDERISQLNAGQLRLL+ +VEKKV GLTNPTVLDAYTKLLRKAT EREKRHEEEVHGERERLKQLKAAHAGVNAKAWDTSHASLDKELAKFQKFLKSKARRIAEEQVLQEEMEKLHNQLMALPARRAAAETKRHAWWACGAVLFAVVGP+LILTL PVGVLIAVGAFLATCVLAAVCWFVGVL GIVVTPALDDDAIEDKTRKRAKETLKGYRAEVRRTFEATEEIFAA+MKWRDDWAEARKKER   XX       KEXXXXXXXX ESRAQGD RPF  GDAR FP+EEEEQGVNSD CSSVGR GPEAEEK S REP    GGGDKGHGSPG G RRPSE+KVVDAGADGAGL PS SRGVVED AL TPPR+KTDS SRP+NV LDE DARGGSVGGSD AP PV+GG AGETS ESSA +R PGDGDS G  EEEASS GEAS +GLLRGP QG S LLEKR+QGLEE  XXXXX    HNQVALP AG+ SATSGGALSGGVVQETGLPSLGG+AAA NG GTGG+N M LS DDEGKGDMAV
Sbjct:    1 MPSIAGFIQSLLSEDMYATGMLEKMDERISQLNAGQLRLLVSYVEKKVPGLTNPTVLDAYTKLLRKATAEREKRHEEEVHGERERLKQLKAAHAGVNAKAWDTSHASLDKELAKFQKFLKSKARRIAEEQVLQEEMEKLHNQLMALPARRAAAETKRHAWWACGAVLFAVVGPILILTLVPVGVLIAVGAFLATCVLAAVCWFVGVLSGIVVTPALDDDAIEDKTRKRAKETLKGYRAEVRRTFEATEEIFAAEMKWRDDWAEARKKERRNEXXQANEKAPKEXXXXXXXXXESRAQGDGRPFSTGDARIFPEEEEEQGVNSDRCSSVGRTGPEAEEKTSGREPPDEEGGGDKGHGSPGAGRRRPSEKKVVDAGADGAGLTPSCSRGVVEDLALLTPPRNKTDSISRPENVNLDEPDARGGSVGGSDTAPVPVEGGLAGETSRESSASKRPPGDGDSGGSVEEEASSGGEASRDGLLRGPCQGSSCLLEKRNQGLEEVEXXXXXXXXXHNQVALPTAGFPSATSGGALSGGVVQETGLPSLGGDAAAANGDGTGGVNRMALSADDEGKGDMAV 573          
BLAST of mRNA_Ecto-sp13_S_contig1.11.1 vs. uniprot
Match: A0A6H5LC81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC81_9PHAE)

HSP 1 Score: 635 bits (1638), Expect = 8.600e-223
Identity = 413/574 (71.95%), Postives = 431/574 (75.09%), Query Frame = 0
Query:    1 MPSIAGFIQSLLSEDMYATGMLEKMDERISQLNAGQLRLLIIFVEKKVTGLTNPTVLDAYTKLLRKATVEREKRHEEEVHGERERLKQLKAAHAGVNAKAWDTSHASLDKELAKFQKFLKSKARRIAEEQVLQEEMEKLHNQLMALPARRAAAETKRHAWWACGAVLFAVVGPMLILTLAPVGVLIAVGAFLATCVLAAVCWFVGVLRGIVVTPALDDDAIEDKTRKRAKETLKGYRAEVRRTFEATEEIFAADMKWRDDWAEARKKERXXXXXXXXXXXLKEXXXXXXXXAESRAQGDDRPFWAGDARTFPDEEEEQGVNSDGCSSVGRAGPEAEEKNSSREPXXXXGGGDKGHGSPGTGPRRPSERKVVDAGADGAGLAPSYSRGVVEDR--ALSTPPRSKTDSSSRPKNVKLDESDARGGSVGGSDAAPAPVKGGPAGETSLESSARRRSPGDGDSRGLTEEEASSQGEASGNGLLRGPYQGPSSLLEKRSQGLEEXXXXXXX---HNQVALPMAGYSSATSGGALSGGVVQETGLPSLGGNAAAVNGAGTGGLNGMTLSVDDEGKGDMAV 569
            MPSIAGFIQSLLSEDMYATGMLEKMDERISQLNAGQLRLLI FVE KV GLTNPTVLDAYTKLLRKATVEREKRHEEEVHGERERLKQLKAAHAGVNAKAWDTSHASLDKELAKFQKFLKSKARRIAEEQVLQEEMEKLHNQLMALPARRAAAETKRHAWWAC AVLFAVVGP+LILTL PVGVLIAVGAFLATCVLAAVCWFVGVLRGIVVTPALDDDAIEDKTRKRAKETLKGYRA+VRRTFEATEEIFAADMKWRDDWAEARKKE XXXXXXXXXXXL+E        AESRAQGDDR F AG++R FPDEEEEQGV+SD CSSVGRAGPEAEEKNS R P    GGGDKGHG       RP+   V+          P  ++ +VE R   L+ P R                      S GG                 LE  A  R  G  D R     E          GL +  +      +E R      XXXXXXX   HNQVALP AG+SSATSGG LSGGVVQETG PS+GGNAA  NGAGTGGLNG+ LS DDEGKGDMAV
Sbjct:    1 MPSIAGFIQSLLSEDMYATGMLEKMDERISQLNAGQLRLLISFVENKVPGLTNPTVLDAYTKLLRKATVEREKRHEEEVHGERERLKQLKAAHAGVNAKAWDTSHASLDKELAKFQKFLKSKARRIAEEQVLQEEMEKLHNQLMALPARRAAAETKRHAWWACSAVLFAVVGPILILTLVPVGVLIAVGAFLATCVLAAVCWFVGVLRGIVVTPALDDDAIEDKTRKRAKETLKGYRADVRRTFEATEEIFAADMKWRDDWAEARKKEXXXXXXXXXXXXLQEKEAAAATAAESRAQGDDRLFRAGNSRIFPDEEEEQGVHSDRCSSVGRAGPEAEEKNSGRVPPEEEGGGDKGHGI------RPTAAVVLKT-------LPWTNQALVEARWGVLTQPQR---------------------WSKGGL----------------LEKLAPNRVLGK-DPRATAIVE----------GLWKQRHHREDRRVETRCXXXXXXXXXXXXXXXHNQVALPRAGFSSATSGGELSGGVVQETGWPSVGGNAAVANGAGTGGLNGIALSADDEGKGDMAV 513          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1Z2_ECTSI4.840e-30686.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LC81_9PHAE8.600e-22371.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 277..297
NoneNo IPR availableCOILSCoilCoilcoord: 72..92
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 181..185
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 186..207
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..158
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 208..569
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 159..180
NoneNo IPR availableTMHMMTMhelixcoord: 184..206
NoneNo IPR availableTMHMMTMhelixcoord: 158..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1contigEcto-sp13_S_contig1:83280..86586 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1.11.1mRNA_Ecto-sp13_S_contig1.11.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1 83280..87436 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1.11.1 ID=prot_Ecto-sp13_S_contig1.11.1|Name=mRNA_Ecto-sp13_S_contig1.11.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=570bp
MPSIAGFIQSLLSEDMYATGMLEKMDERISQLNAGQLRLLIIFVEKKVTG
LTNPTVLDAYTKLLRKATVEREKRHEEEVHGERERLKQLKAAHAGVNAKA
WDTSHASLDKELAKFQKFLKSKARRIAEEQVLQEEMEKLHNQLMALPARR
AAAETKRHAWWACGAVLFAVVGPMLILTLAPVGVLIAVGAFLATCVLAAV
CWFVGVLRGIVVTPALDDDAIEDKTRKRAKETLKGYRAEVRRTFEATEEI
FAADMKWRDDWAEARKKERRDERRQAKEKALKEKEAAAAAAAESRAQGDD
RPFWAGDARTFPDEEEEQGVNSDGCSSVGRAGPEAEEKNSSREPPEEEGG
GDKGHGSPGTGPRRPSERKVVDAGADGAGLAPSYSRGVVEDRALSTPPRS
KTDSSSRPKNVKLDESDARGGSVGGSDAAPAPVKGGPAGETSLESSARRR
SPGDGDSRGLTEEEASSQGEASGNGLLRGPYQGPSSLLEKRSQGLEEEEE
EEQQHNQVALPMAGYSSATSGGALSGGVVQETGLPSLGGNAAAVNGAGTG
GLNGMTLSVDDEGKGDMAV*
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