prot_Ecto-sp13_S_contig1.1.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1.1.1
Unique Nameprot_Ecto-sp13_S_contig1.1.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1057
Homology
BLAST of mRNA_Ecto-sp13_S_contig1.1.1 vs. uniprot
Match: D7G201_ECTSI (Sel1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G201_ECTSI)

HSP 1 Score: 1665 bits (4312), Expect = 0.000e+0
Identity = 979/1057 (92.62%), Postives = 998/1057 (94.42%), Query Frame = 0
Query:    1 MPRSTPELRLEALLDDDLDSSQGFDNGLIVDTDEESETPPAYNEGIVQRPSARLVSRRTHDNDDGGTSRAKTKQSPAGSRLLSATSAALARVKGMTLRSGTSGRVLNPRSVTLVSGLLSPSRGTKGDDNDDADRTSEEDRSRKGRPFSQGHVENDKGAPWVQDPGQDDDGGGTKSNKQKLSVLFDNEESNAENGTEEGANTSSTSTNDSNAATPRSKWAATLMASTLAREKVTGKAMMRNQVDLLPHPREAANKIEYLVMVCKAAQAYASTQAARLSRVRDGQHMINQLRDVASDLGRQAEKILAVYDTREVRNSADRLGETLKGVYDLLGDVEGTAIMFGRKRGFGKRVTALVHDIGTRANALLAATSLAIADRPNVLYMADTGGGEPPAPQQQELLKMCIEGDKFFFGRGENPNMSKAFEAYAWAAERGCAEAMYMMAWMYRVGSGSVDADAEQCQWWLERAVDKGYAPAMNDLATTLLEQADRTERAHPELKADVTAADVTADNPADDADRGLGATRPLTPDGHTSGGFEEGLXXXXXXXXXXXXXXXXXXXXXXXXGRQVEAEEDATSLPPELAQLFEQVMEKRKRSMQLLQDAAKTGHTEAMTNLGNMQEAMGYFEDARSWYSLAAHPSESANNPRAQNYLGTLFYEGRGVTKDTYEAVKWFRFSARQGFSQACQNLXXXXXXXXXXXXXXXXXXXXXXXXXEGGSISATNSLAYLLARDALHTLAAAARQVPPGLDQRKLSAGVAGTGLQFEDPSRGIMKPAGLSSQASSKAWRESTAQLREAADLFRRAADSGIGDASYQLGRLYQQGLGIPLDPVASFENFLAAADGEMASAVPSFAACVGDMLYTGTGCLRDFGAALRYYVRAAHAGEATSANAAGLMHELGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLERGDPLSAIASAAGLPMFQEQQQLPLRPSAGFLSSMAGAGCPATVTAPNCSPPAGGGLFGANGDDDGDLAVASGSTG-VGQRPLWGNRPLALQMFRRAAELGHPEAMQEVHRLRLREKIDHLMADRGEKRNTC 1056
            MPRSTPELRLEA  DD LD  + FDNGLIVDTDEESETPP YNEGI+QRPSARLVSRRT DNDDGGTS AKTKQSPAGSRLLSATSAAL RVKGMTLRSGTSGRVLNPRSVTLVSGLLSPSRG KG DND ADRTSEEDRSRK RPFSQGHVENDK APWVQDPGQDDDGGGTKSNKQKLSVLFD+EESNAENGTEEGA+  STSTNDSNAATPRSKWAATLMASTLAREK TGKAM+RN+VDLLPHPREAANKIEYLVMVCKAAQAYASTQAARLSRVRDGQHMINQLRDVASDLGRQAEK+LAVYDTREVRNSADRLGETLKGVYDLLGDVEGTAIMFGRKRGFGKRVTALVHDIGTRANALLAATSLAIADRPNVLYMADTGGGEPPAPQQQELLKMCIEGDKFFFGRGENPNMSKAFEAYAWAAERGCAEAMYMMAWMYRVGSGSVDADAEQCQ WLERAVDKGYAPAMNDLATTLLEQADRTERAHPELKADV AADV AD+P DDADRGLGATRP TPD HTSGG EE  XXXXXXXXXXXXXXXXXXXXXX  GRQVEAEEDA+SLPPELAQLFEQVMEKRKRSMQLLQDAAKTGHTEAMTNLGNMQEAMGYFEDARSWYSLAAHPSESANNPRAQNYLGTLFYEGRGVTKD  EAVKWFR SARQGF QAC   XXXXXXXXXXXXXXXXXXXXXXXXXEGGSISATNSLAYLLARDALH LAAAARQ PPGLDQR LSAGVAGTGLQFEDPSRGIMKPAGLSSQASSKAWRESTAQLREAADLFRRAADSGIGDASYQLGRLYQQGLGIPL+PVASFENFLAAADGE+    P+ AACVGDMLYTGTGCLRD+GAALRYYVRAAHAGEATSANAA        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LERGDPLSAIASAAGLPMFQEQQQLPLRPS+GFL+SMAGAGCPAT T P CSPPAGGGLFGANG DDGDLAVASGSTG VGQRPLWGNRPLALQMF+RAAELGHPEAM+EVHRLRLRE+IDHLMADRGEKR+ C
Sbjct:    1 MPRSTPELRLEAPPDDGLD--RVFDNGLIVDTDEESETPPPYNEGIIQRPSARLVSRRTDDNDDGGTSIAKTKQSPAGSRLLSATSAALTRVKGMTLRSGTSGRVLNPRSVTLVSGLLSPSRGKKGVDNDGADRTSEEDRSRKDRPFSQGHVENDKSAPWVQDPGQDDDGGGTKSNKQKLSVLFDDEESNAENGTEEGASIPSTSTNDSNAATPRSKWAATLMASTLAREKATGKAMVRNRVDLLPHPREAANKIEYLVMVCKAAQAYASTQAARLSRVRDGQHMINQLRDVASDLGRQAEKMLAVYDTREVRNSADRLGETLKGVYDLLGDVEGTAIMFGRKRGFGKRVTALVHDIGTRANALLAATSLAIADRPNVLYMADTGGGEPPAPQQQELLKMCIEGDKFFFGRGENPNMSKAFEAYAWAAERGCAEAMYMMAWMYRVGSGSVDADAEQCQRWLERAVDKGYAPAMNDLATTLLEQADRTERAHPELKADVAAADVIADSPTDDADRGLGATRPPTPDDHTSGGSEEXXXXXXXXXXXXXXXXXXXXXXXXDGGRQVEAEEDASSLPPELAQLFEQVMEKRKRSMQLLQDAAKTGHTEAMTNLGNMQEAMGYFEDARSWYSLAAHPSESANNPRAQNYLGTLFYEGRGVTKDRDEAVKWFRLSARQGFPQACXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGSISATNSLAYLLARDALHALAAAARQAPPGLDQRNLSAGVAGTGLQFEDPSRGIMKPAGLSSQASSKAWRESTAQLREAADLFRRAADSGIGDASYQLGRLYQQGLGIPLEPVASFENFLAAADGEVVH--PTAAACVGDMLYTGTGCLRDYGAALRYYVRAAHAGEATSANAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLERGDPLSAIASAAGLPMFQEQQQLPLRPSSGFLTSMAGAGCPATATPPRCSPPAGGGLFGANGGDDGDLAVASGSTGGVGQRPLWGNRPLALQMFQRAAELGHPEAMREVHRLRLRERIDHLMADRGEKRHAC 1053          
BLAST of mRNA_Ecto-sp13_S_contig1.1.1 vs. uniprot
Match: A0A836CC33_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC33_9STRA)

HSP 1 Score: 418 bits (1075), Expect = 1.820e-121
Identity = 286/662 (43.20%), Postives = 358/662 (54.08%), Query Frame = 0
Query:  245 LPHPREAANKIEYLVMVCKAAQAYASTQAARLSRVRDGQHMINQLRDVASDLGRQAEKILAVYDTREVRNSADRLGETLKGVYDLLGDVEGTAIMFGRKRGFGKRVTALVHDIGTRANALLAATSLAIADRPNVLYMADTGGGEPPAPQQQELLKMCIEGDKFFFGRGENPNMSKAFEAYAWAAERGCAEAMYMMAWMYRVGSGSVDADAEQCQWWLERAVDKGYAPAMNDLATTLLEQADRTERAHPELKADVTAADVTADNPADDADRGLGATRPLTPDGHTSGGFEEGLXXXXXXXXXXXXXXXXXXXXXXXXGRQVEAEEDATSLPPELAQLFEQVMEKRKRSMQLLQ-------------------------DAAKTGHTEAMTNLGNMQEAMGYFEDARSWYSLAAHPSES-ANNPRAQNYLGTLFYEGRGVTKDTYEAVKWFRFSARQGFSQACQNLXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------EGGSISATNSLAYLLARDALHTLAAAARQ-VPPGLDQRKLSAGVAGTGLQFEDPSRGIMKPAGLSSQAS---------------------SKAWRESTAQLREAADLFRRAADSGIGDASYQLGRLYQQGLGIPLDPVASF 826
            +P   +  NK+++LV VCK+ + YA    A+L  VR G  +I  LRD  +DL RQ +KILAVYDT EVR SADRLG TL  V+++L DVE  A MFGRK+GFGKRV ALV ++GT AN+LLAATSLAIADRP +LYM D   G PP  + +EL++ C+EGD++++GR   PN  KA  AY WAAERG  EA YM+AWMY+ G   V ADAE+C  WLERAV++GYAPAMN+LA  LLE+A+    A PE++A   A D  A   AD AD   G                   XXXXXXXXX                R+++      +L PE A  F    E RKR+  LLQ                          AA+ GH +AM +LG++ E  G    AR WY LAA P +  ANN RAQN+LG +++ GRG  +D  EA +WF+ +A+QG + AC NL                                                         EGGS SA  +LAYLLAR+ALH L   A Q  P   D   L  G  G  +QFEDP RG M+    S+ AS                     +   RE T QL EAA+LFRRAAD+G  DASYQLGRLY+QGLG+P+DP+A+F
Sbjct:  326 MPREEDVGNKVDFLVAVCKSTEVYAKQLEAKLGTVRSGVALIEGLRDTHADLKRQRDKILAVYDTLEVRRSADRLGTTLTHVFEVLSDVERAARMFGRKKGFGKRVQALVQELGTNANSLLAATSLAIADRPQMLYMVDADDGAPPKHKLEELIQRCLEGDRWYYGREGPPNFEKAHAAYLWAAERGFGEAQYMLAWMYKHGH-FVTADAERCTHWLERAVERGYAPAMNELALLLLEEAEGISAAWPEVQA---AFDELASKAAD-ADA-AGDXXXXXXXXXXXXXXXXXXXXXXXXXXXARDVRGSAAAALGATQRRLQR-----TLSPEAAAKFAAAAELRKRAQSLLQRVRLCVRREVRCVRQLCAAAVPAAVSAARLGHADAMASLGSLLEEAGRVRAARRWYELAAAPGDGGANNARAQNFLGRMYHSGRGAARDPREAARWFKRAAKQGLAAACNNLGLCYEAGAGVQKVGAGKRKVCRRFADTSPFCMDAATGAARASAHDTSKAIELYRQGVEGGSASACGNLAYLLAREALHALGCLAGQGTPLRGDGGALQWGRGG--MQFEDPQRGAMESPEASAAASQCTLARCVSPLDVPLETTMSAADVRREMTRQLLEAAELFRRAADAGSADASYQLGRLYEQGLGMPVDPMAAF 974          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G201_ECTSI0.000e+092.62Sel1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836CC33_9STRA1.820e-12143.20MYND-type domain-containing protein n=1 Tax=Tribon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 397..432
e-value: 240.0
score: 1.6
coord: 676..711
e-value: 1.2E-9
score: 48.0
coord: 604..635
e-value: 280.0
score: 1.1
coord: 843..877
e-value: 12.0
score: 13.0
coord: 996..1026
e-value: 96.0
score: 5.1
coord: 433..469
e-value: 1.0E-5
score: 35.0
coord: 640..675
e-value: 1.9E-8
score: 44.1
coord: 802..837
e-value: 7.9E-4
score: 28.7
coord: 878..913
e-value: 1.6E-6
score: 37.7
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 676..711
e-value: 1.2E-5
score: 25.8
coord: 640..674
e-value: 2.1E-5
score: 25.0
coord: 433..469
e-value: 4.2E-6
score: 27.2
coord: 880..913
e-value: 6.4E-6
score: 26.7
coord: 849..876
e-value: 0.13
score: 13.0
coord: 1006..1026
e-value: 1.8
score: 9.4
coord: 803..834
e-value: 0.049
score: 14.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 776..940
e-value: 5.5E-30
score: 106.4
coord: 568..747
e-value: 2.1E-36
score: 127.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 387..505
e-value: 4.3E-14
score: 53.8
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 612..1035
coord: 412..722
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 584..714
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 785..927
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 407..485

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1contigEcto-sp13_S_contig1:1394..8799 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1.1.1mRNA_Ecto-sp13_S_contig1.1.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1 1394..8799 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1.1.1 ID=prot_Ecto-sp13_S_contig1.1.1|Name=mRNA_Ecto-sp13_S_contig1.1.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1057bp
MPRSTPELRLEALLDDDLDSSQGFDNGLIVDTDEESETPPAYNEGIVQRP
SARLVSRRTHDNDDGGTSRAKTKQSPAGSRLLSATSAALARVKGMTLRSG
TSGRVLNPRSVTLVSGLLSPSRGTKGDDNDDADRTSEEDRSRKGRPFSQG
HVENDKGAPWVQDPGQDDDGGGTKSNKQKLSVLFDNEESNAENGTEEGAN
TSSTSTNDSNAATPRSKWAATLMASTLAREKVTGKAMMRNQVDLLPHPRE
AANKIEYLVMVCKAAQAYASTQAARLSRVRDGQHMINQLRDVASDLGRQA
EKILAVYDTREVRNSADRLGETLKGVYDLLGDVEGTAIMFGRKRGFGKRV
TALVHDIGTRANALLAATSLAIADRPNVLYMADTGGGEPPAPQQQELLKM
CIEGDKFFFGRGENPNMSKAFEAYAWAAERGCAEAMYMMAWMYRVGSGSV
DADAEQCQWWLERAVDKGYAPAMNDLATTLLEQADRTERAHPELKADVTA
ADVTADNPADDADRGLGATRPLTPDGHTSGGFEEGLPDGGSSGDGVGGTG
QGGGNCKGAGGRQVEAEEDATSLPPELAQLFEQVMEKRKRSMQLLQDAAK
TGHTEAMTNLGNMQEAMGYFEDARSWYSLAAHPSESANNPRAQNYLGTLF
YEGRGVTKDTYEAVKWFRFSARQGFSQACQNLGMCYQTGVGVEKDLPKAV
ELFRQAVEGGSISATNSLAYLLARDALHTLAAAARQVPPGLDQRKLSAGV
AGTGLQFEDPSRGIMKPAGLSSQASSKAWRESTAQLREAADLFRRAADSG
IGDASYQLGRLYQQGLGIPLDPVASFENFLAAADGEMASAVPSFAACVGD
MLYTGTGCLRDFGAALRYYVRAAHAGEATSANAAGLMHELGRGVPRNLEV
ANFWYQKAATLGSADGAFNAALLLERGDPLSAIASAAGLPMFQEQQQLPL
RPSAGFLSSMAGAGCPATVTAPNCSPPAGGGLFGANGDDDGDLAVASGST
GVGQRPLWGNRPLALQMFRRAAELGHPEAMQEVHRLRLREKIDHLMADRG
EKRNTC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf