mRNA_Ecto-sp13_S_contig9994.21639.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9994.21639.1 vs. uniprot
Match: A0A6H5KZ79_9PHAE (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZ79_9PHAE) HSP 1 Score: 125 bits (314), Expect = 3.090e-28 Identity = 62/64 (96.88%), Postives = 62/64 (96.88%), Query Frame = 2
Query: 485 VCPDCTFLILACDGVWDVFTDNDAVSFVTQAMETMAEADVAGALLRESLARGSTDNITVVIVFF 676
VCPDCTFLILACDGVWDVFTDNDAVSFVTQAME MAEADVAG LLRESLARGSTDNITVVIVFF
Sbjct: 237 VCPDCTFLILACDGVWDVFTDNDAVSFVTQAMENMAEADVAGELLRESLARGSTDNITVVIVFF 300
BLAST of mRNA_Ecto-sp13_S_contig9994.21639.1 vs. uniprot
Match: A0A0N1PEL9_LEPSE (Protein phosphatase 2C-like protein n=1 Tax=Leptomonas seymouri TaxID=5684 RepID=A0A0N1PEL9_LEPSE) HSP 1 Score: 68.9 bits (167), Expect = 9.540e-9 Identity = 36/70 (51.43%), Postives = 50/70 (71.43%), Query Frame = 2
Query: 467 DTVTSCVCPDCTFLILACDGVWDVFTDNDAVSFVTQAMETMAEAD-VAGALLRESLARGSTDNITVVIVF 673
DT + P+ TFL++ACDG+WD T +AV F +Q ME A+A+ +A L+RE+L RG+ DNITVV+VF
Sbjct: 295 DTCEMRLTPEDTFLLIACDGLWDTMTYAEAVQFCSQHMEKGADANAIADKLVREALMRGTRDNITVVLVF 364
BLAST of mRNA_Ecto-sp13_S_contig9994.21639.1 vs. uniprot
Match: A0A7S2WJS9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJS9_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 3.370e-8 Identity = 35/80 (43.75%), Postives = 50/80 (62.50%), Query Frame = 2
Query: 449 RGMYGEDTVTSCVC-PDCTFLILACDGVWDVFTDNDAVSFVTQ---AMETMAEADVAGALLRESLARGSTDNITVVIVFF 676
R + E +T+ C P FLILACDG+WDV TD++AV VT + E D A L++E+ RGSTDN++ ++V+F
Sbjct: 232 RFVTAEPHITTHTCTPQDKFLILACDGIWDVLTDDEAVKIVTTISAGSTKIQEKDAAEVLVQEAARRGSTDNLSAIVVYF 311
BLAST of mRNA_Ecto-sp13_S_contig9994.21639.1 vs. uniprot
Match: A0A7S3PJ58_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PJ58_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 5.550e-8 Identity = 32/70 (45.71%), Postives = 50/70 (71.43%), Query Frame = 2
Query: 470 TVTSCVCPDCTFLILACDGVWDVFTDNDAVSFVTQAM--ETMAEADVAGALLRESLARGSTDNITVVIVF 673
T T+ + FLI+ACDG+WDVFTD +AV++V + + E + E + A L++E++ RGS DN+TV+IV+
Sbjct: 204 TTTTMLTDTDRFLIVACDGIWDVFTDEEAVTYVCEILDEEKVPENEAARRLVQEAINRGSQDNVTVLIVY 273
BLAST of mRNA_Ecto-sp13_S_contig9994.21639.1 vs. uniprot
Match: A0A448ZP51_9STRA (PPM-type phosphatase domain-containing protein (Fragment) n=2 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZP51_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 8.560e-8 Identity = 36/72 (50.00%), Postives = 50/72 (69.44%), Query Frame = 2
Query: 464 EDTVTSCVCPDCTFLILACDGVWDVFTDNDAVSFVTQAMETMAEAD-VAGALLRESLARGSTDNITVVIVFF 676
E+++T D +F+ILACDG+WDV D +AV FV ++ +AE + VA L+ E+L RGSTDNITV + FF
Sbjct: 346 ENSITVAPETDVSFIILACDGLWDVIKDQEAVDFV---LDRIAEKELVAKYLVEEALKRGSTDNITVSVAFF 414
BLAST of mRNA_Ecto-sp13_S_contig9994.21639.1 vs. uniprot
Match: A0A3G4ZWG4_9VIRU (Serine/threonine protein phosphatase n=1 Tax=Faunusvirus sp. TaxID=2487766 RepID=A0A3G4ZWG4_9VIRU) HSP 1 Score: 64.7 bits (156), Expect = 8.590e-8 Identity = 29/58 (50.00%), Postives = 42/58 (72.41%), Query Frame = 2
Query: 503 FLILACDGVWDVFTDNDAVSFVTQAMETMAEADVAGALLRESLARGSTDNITVVIVFF 676
F+I+ CDG+WDV ++ DAV FV + M+T + +VA L ++ GSTDNITV+I+FF
Sbjct: 203 FIIMGCDGLWDVLSNQDAVDFVVEKMDTAPKNNVAKQLGEFAIKSGSTDNITVIIIFF 260
BLAST of mRNA_Ecto-sp13_S_contig9994.21639.1 vs. uniprot
Match: A0A1V9YJW9_9STRA (Protein phosphatase 2C n=2 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJW9_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 2.480e-7 Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 2
Query: 491 PDCTFLILACDGVWDVFTDNDAVSFVTQAMETMAEADVAGALLRESLARGSTDNITVVIVFF 676
P FL++ACDG+++VFT AV FV +ETMA A + AL+ E++A GS DN++VV+ F
Sbjct: 214 PGDEFLLIACDGLFEVFTPATAVDFVRSRLETMAPAQICDALVAEAIAAGSQDNVSVVLAVF 275
BLAST of mRNA_Ecto-sp13_S_contig9994.21639.1 vs. uniprot
Match: A0A2R5G8U3_9STRA (Protein phosphatase 2C-like 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8U3_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 2.610e-7 Identity = 31/60 (51.67%), Postives = 46/60 (76.67%), Query Frame = 2
Query: 494 DCTFLILACDGVWDVFTDNDAVSFVTQAM-ETMAEADVAGALLRESLARGSTDNITVVIV 670
D +FLI+ACDGVWDV TD +AV FV +A+ + +A ++ L+ E+++RGSTDN+T +IV
Sbjct: 134 DDSFLIVACDGVWDVMTDQEAVDFVQKAINDKVALEALSQYLVTEAISRGSTDNVTALIV 193
BLAST of mRNA_Ecto-sp13_S_contig9994.21639.1 vs. uniprot
Match: A0A7S2FT30_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FT30_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 2.950e-7 Identity = 34/77 (44.16%), Postives = 47/77 (61.04%), Query Frame = 2
Query: 452 GMYGE--DTVTSCVCPDCTFLILACDGVWDVFTDNDAVSFVTQAMETMAEADVAGALLRESLARGSTDNITVVIVFF 676
G GE D T+ + P C FLI+ACDG+WDV T DAV V A+ + + D + AL + R S DN+TV+++FF
Sbjct: 37 GCVGEEPDLFTTIIDPCCEFLIMACDGIWDVLTSEDAVREV--ALASASGRDASKALEEMARLRHSQDNVTVMVIFF 111
BLAST of mRNA_Ecto-sp13_S_contig9994.21639.1 vs. uniprot
Match: A0A7S2WAS5_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WAS5_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 3.900e-7 Identity = 29/59 (49.15%), Postives = 44/59 (74.58%), Query Frame = 2
Query: 503 FLILACDGVWDVFTDNDAVSFVTQAMETMAEAD-VAGALLRESLARGSTDNITVVIVFF 676
F+I+ACDGVWDV +D +AV F+ +A+ A D ++ L++E+L RGSTDN+T ++V F
Sbjct: 182 FVIIACDGVWDVLSDQEAVEFIKKAVSDGANMDDLSKMLVQEALNRGSTDNVTALVVHF 240 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9994.21639.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9994.21639.1 >prot_Ecto-sp13_S_contig9994.21639.1 ID=prot_Ecto-sp13_S_contig9994.21639.1|Name=mRNA_Ecto-sp13_S_contig9994.21639.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=75bp MYGEDTVTSCVCPDCTFLILACDGVWDVFTDNDAVSFVTQAMETMAEADVback to top mRNA from alignment at Ecto-sp13_S_contig9994:444..5906- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9994.21639.1 ID=mRNA_Ecto-sp13_S_contig9994.21639.1|Name=mRNA_Ecto-sp13_S_contig9994.21639.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5463bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9994:444..5906- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9994:444..5906- >mRNA_Ecto-sp13_S_contig9994.21639.1 ID=mRNA_Ecto-sp13_S_contig9994.21639.1|Name=mRNA_Ecto-sp13_S_contig9994.21639.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=225bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9994:444..5906- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |