mRNA_Ecto-sp13_S_contig9979.21627.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9979.21627.1 vs. uniprot
Match: D7FLN5_ECTSI (Protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN5_ECTSI) HSP 1 Score: 303 bits (775), Expect = 1.150e-93 Identity = 169/217 (77.88%), Postives = 182/217 (83.87%), Query Frame = 3 Query: 246 PCPGRWRSPLDSCRPKDIRRGVGYGQTVMAAAQELAQHCQIPGVSEAAKAVSILERLVSGSRDYAVRGDAGVKQCRSIVIMLERAAK----GGDTNGEAA*ALMEDVHDAVCDLVELIRTYQSKNRLSKMLMSTLFKQRQDELNAVVDRAILRLHLGLQVQVGHDVSAVKEVMRRHK----EAISESLAEARSARRQRRIDQLEIPEDHMLITNKVL 872 P PG +P + GVGYGQ VMAAAQELAQHCQIPGVSEAA AVSIL RLVS SRDYAVRGDAGVK+CRSIV+MLE AAK GGDTNGEAA ALMEDVHDAVCDLVELI+TYQSKNRLS +LMSTLFK+RQDEL+AVVDRAILRLHLGLQVQVGHDVS KEV RHK EA+SE LAEARSARRQRR+DQL IPEDH+LIT++VL Sbjct: 84 PVPGDGGAPSMVGARRTSDGGVGYGQAVMAAAQELAQHCQIPGVSEAATAVSILVRLVSDSRDYAVRGDAGVKRCRSIVMMLELAAKVLGKGGDTNGEAAQALMEDVHDAVCDLVELIKTYQSKNRLSNVLMSTLFKRRQDELDAVVDRAILRLHLGLQVQVGHDVSEAKEVTHRHKGSMEEAMSEPLAEARSARRQRRLDQLAIPEDHVLITDEVL 300
BLAST of mRNA_Ecto-sp13_S_contig9979.21627.1 vs. uniprot
Match: A0A6H5KA37_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA37_9PHAE) HSP 1 Score: 240 bits (613), Expect = 1.880e-66 Identity = 131/194 (67.53%), Postives = 160/194 (82.47%), Query Frame = 3 Query: 306 GVGYGQTVMAAAQELAQHCQIPGVSEAAKAVSILERLVSGSRDYAVRGDAGVKQCRSIVIMLERAAK----GGDTNGEAA*ALMEDVHDAVCDLVELIRTYQSKNRLSKMLMSTLFKQRQDELNAVVDRAILRLHLGLQVQVGHDVSAVKEVMRRHK-EAISESLAEARSARRQRRIDQLEIPEDHMLITNKVL 872 GV YGQ V+AAA+ELA HCQIPGVSEAA VSIL LV+ SRD RGD VK+CRSIV+MLERAAK GGDTN E AL+E+VHDAV DLV+LI+TYQ+KN+LSK+LMSTLFK+RQ+EL+AVVD+AIL LHLGLQVQVG DV+ ++ +R EA +ESLAEAR ARRQR++DQ+EIP+DH++IT ++L Sbjct: 568 GVEYGQAVLAAAEELAHHCQIPGVSEAATVVSILVHLVTDSRDSMSRGDGAVKRCRSIVMMLERAAKVLGNGGDTNSEVERALIEEVHDAVSDLVDLIKTYQNKNKLSKVLMSTLFKRRQEELDAVVDKAILHLHLGLQVQVGQDVAEGLDLHKRSTAEAKAESLAEARRARRQRKLDQVEIPDDHVVITEEML 761
BLAST of mRNA_Ecto-sp13_S_contig9979.21627.1 vs. uniprot
Match: D7FN19_ECTSI (Putative CTR1-like protein kinase/ leucine rich repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN19_ECTSI) HSP 1 Score: 240 bits (613), Expect = 3.410e-66 Identity = 131/194 (67.53%), Postives = 160/194 (82.47%), Query Frame = 3 Query: 306 GVGYGQTVMAAAQELAQHCQIPGVSEAAKAVSILERLVSGSRDYAVRGDAGVKQCRSIVIMLERAAK----GGDTNGEAA*ALMEDVHDAVCDLVELIRTYQSKNRLSKMLMSTLFKQRQDELNAVVDRAILRLHLGLQVQVGHDVSAVKEVMRRHK-EAISESLAEARSARRQRRIDQLEIPEDHMLITNKVL 872 GV YGQ V+AAA+ELA HCQIPGVSEAA VSIL LV+ SRD RGD VK+CRSIV+MLERAAK GGDTN E AL+E+VHDAV DLV+LI+TYQ+KN+LSK+LMSTLFK+RQ+EL+AVVD+AIL LHLGLQVQVG DV+ ++ +R EA +ESLAEAR ARRQR++DQ+EIP+DH++IT ++L Sbjct: 711 GVEYGQAVLAAAEELAHHCQIPGVSEAATVVSILVHLVTDSRDSLSRGDLAVKRCRSIVMMLERAAKVLGKGGDTNSEVERALLEEVHDAVSDLVDLIKTYQNKNKLSKVLMSTLFKRRQEELDAVVDKAILHLHLGLQVQVGQDVAEGLDLHKRSTAEAKAESLAEARRARRQRKLDQVEIPDDHVVITEEML 904
BLAST of mRNA_Ecto-sp13_S_contig9979.21627.1 vs. uniprot
Match: D7FLJ2_ECTSI (TKL family protein kinase protein kinase/ putative CTR1-like protein kinase/ leucine rich repeat pr n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ2_ECTSI) HSP 1 Score: 227 bits (578), Expect = 1.780e-61 Identity = 128/193 (66.32%), Postives = 154/193 (79.79%), Query Frame = 3 Query: 306 GVGYGQTVMAAAQELAQHCQIPGVSEAAKAVSILERLVSGSRDYAVRGDAGVKQCRSIVIMLERAAK----GGDTNGEAA*ALMEDVHDAVCDLVELIRTYQSKNRLSKMLMSTLFKQRQDELNAVVDRAILRLHLGLQVQVGHDVSAVKEVMRRHKEAISESLAEARSARRQRRIDQLEIPEDHMLITNKVL 872 GV YGQ V+ AA+ELA HCQIPGVSEAA AVSIL LV SRD + GVK+CRSIV+MLERAAK GGDT+ E LME+VHDAV DL ELI+TYQ+K++L+++L STLFK+RQDELNAV+DRAI LHLGLQVQVGHDV+ + V R EA +ESLAEAR +RRQR++DQ+EIPEDH+ ITN++L Sbjct: 713 GVAYGQAVLVAAEELAHHCQIPGVSEAATAVSILVHLVLDSRD--LTSGTGVKRCRSIVMMLERAAKVLGQGGDTSTEEERVLMEEVHDAVSDLNELIKTYQNKSKLAQLLTSTLFKRRQDELNAVMDRAIWGLHLGLQVQVGHDVAHL--VKRSTAEAQAESLAEARRSRRQRKLDQIEIPEDHVSITNEML 901
BLAST of mRNA_Ecto-sp13_S_contig9979.21627.1 vs. uniprot
Match: D8LRE9_ECTSI (Transmembrane receptor kinase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE9_ECTSI) HSP 1 Score: 218 bits (555), Expect = 8.830e-59 Identity = 124/200 (62.00%), Postives = 154/200 (77.00%), Query Frame = 3 Query: 300 RRG----VGYGQTVMAAAQELAQHCQIPGVSEAAKAVSILERLVSGSRDYAVRGDAGVKQCRSIVIMLERAAK----GGDTNGEAA*ALMEDVHDAVCDLVELIRTYQSKNRLSKMLMSTLFKQRQDELNAVVDRAILRLHLGLQVQVGHDVSAVKEVMRRH-KEAISESLAEARSARRQRRIDQLEIPEDHMLITNKVL 872 RRG VG GQ VM AAQELA CQ+PGVSEA VSIL LV SRD + GD+ ++QCRSIV++L RA K G +T G+ A L++DVH+A+ DLVELI+TYQSKN+LSK+LMSTLFK+RQDEL+AVVDRAI+RL LGLQVQVG DV A ++ + E SESLA+ARS RR+R++DQ+EIPE+H+ ITN+VL Sbjct: 468 RRGSFGDVGVGQAVMVAAQELAHRCQVPGVSEAVTLVSILVNLVKDSRDDSSGGDSRLRQCRSIVMVLNRADKVAGNGENTTGKVARTLIDDVHEAIFDLVELIKTYQSKNKLSKVLMSTLFKRRQDELDAVVDRAIVRLQLGLQVQVGQDVKAGMDLYKGSIAEVQSESLADARSTRRRRKLDQVEIPEEHVTITNEVL 667
BLAST of mRNA_Ecto-sp13_S_contig9979.21627.1 vs. uniprot
Match: D7FRQ5_ECTSI (Similar to CG1848-PA, isoform A/ leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ5_ECTSI) HSP 1 Score: 216 bits (551), Expect = 2.930e-58 Identity = 124/210 (59.05%), Postives = 156/210 (74.29%), Query Frame = 3 Query: 267 SPLDSCRPKDIRR----GVGYGQTVMAAAQELAQHCQIPGVSEAAKAVSILERLVSGSRDYAVRGDAGVKQCRSIVIMLERAAK----GGDTNGEAA*ALMEDVHDAVCDLVELIRTYQSKNRLSKMLMSTLFKQRQDELNAVVDRAILRLHLGLQVQVGHDVSAVKEVMRRHKEAISESLAEARSARRQRRIDQLEIPEDHMLITNKVL 872 +P + P RR G+GYGQ V+AAA+EL +CQIPGV EAA AVSIL RLV SRD + GVK+CRSIV ML+RAAK GGDT+ E LME+VH AV DLVELI+TY++K++L++ML STLFK+RQDELNAV+DRAI LHLGLQVQVGHDV+ + + + +ES+AEAR RR+R++DQ EIPEDH+ ITN++L Sbjct: 476 APSPAAAPAGGRRRTSCGIGYGQAVLAAAEELVHNCQIPGVCEAATAVSILIRLVLDSRD--LTSSPGVKRCRSIVTMLQRAAKVVGTGGDTSTEEGRVLMEEVHGAVSDLVELIKTYENKSKLAQMLTSTLFKRRQDELNAVLDRAIWGLHLGLQVQVGHDVAHLVKRSTAEAQDQAESVAEARRLRRRRKLDQNEIPEDHVSITNEML 683
BLAST of mRNA_Ecto-sp13_S_contig9979.21627.1 vs. uniprot
Match: D8LHV1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV1_ECTSI) HSP 1 Score: 215 bits (548), Expect = 1.550e-57 Identity = 124/210 (59.05%), Postives = 154/210 (73.33%), Query Frame = 3 Query: 267 SPLDSCRPKDIRRGVGYGQTVMAAAQELAQHCQIPGVSEAAKAVSILERLVSGSRDYAVRGDAGVKQCRSIVIMLERAAK----GGDTNGEAA*ALMEDVHDAVCDLVELIRTYQSKNRLSKMLMSTLFKQRQDELNAVVDRAILRLHLGLQVQVGHDVSAVKEVMRRHK----EAISESLAEARSARRQRRIDQLEIPEDHMLITNKVL 872 S DS R + VG GQ V+ AQELA HCQ+PGVSE A VS+L LV+ S D D ++QCRSI+I+L RA K G +T GE L+EDVH+A+ DLVELI+TYQSKN+LSK+LMSTLFK+RQDEL+AVVDRA++RL LGL +QVG DVSA+K M ++K EA SESLA+AR RRQR++DQ+EIPE H+ ITN+VL Sbjct: 625 SQTDSHRASVVT-SVGGGQAVLLLAQELAHHCQVPGVSEVATLVSLLVNLVTDSCDNNGGSDGRLRQCRSIIILLNRADKVAGNGENTTGEVTRMLIEDVHEAIFDLVELIKTYQSKNKLSKVLMSTLFKRRQDELDAVVDRAMVRLQLGLHMQVGQDVSAIKTGMDQYKGSIAEAQSESLADARRTRRQRKLDQVEIPEGHLTITNEVL 833
BLAST of mRNA_Ecto-sp13_S_contig9979.21627.1 vs. uniprot
Match: D8LH32_ECTSI (Leucine rich repeat tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH32_ECTSI) HSP 1 Score: 207 bits (526), Expect = 1.400e-54 Identity = 121/209 (57.89%), Postives = 150/209 (71.77%), Query Frame = 3 Query: 306 GVGYGQTVMAAAQELAQHCQIPGVSEAAKAVSILERLVSGSRDYAVRGDAGVKQCRSIVIMLERAAK----GGDTNGEAA*ALMEDVHDAVCDLVELIRTYQSKNRLSKMLMSTLFKQRQDELNAVVDRAILRLHLGLQVQVGHDVSAVKEVMRRHKEAISESLAEARS----------------ARRQRRIDQLEIPEDHMLITNKVL 872 GVGYGQ V+AAA+ELA HCQIPG+SEAA AVSIL LV + D + AGVK+CRSIV+MLERAAK GGDT+ E LME+VHDAV DLVELI +YQ+K++L K+L STLFK+RQDELNAV+DRAI LHLGLQVQVGHDV+ + K + +E+ A+A +RRQR++DQ+EIPE+H+ IT +VL Sbjct: 645 GVGYGQAVLAAAEELAHHCQIPGISEAATAVSILIHLVVDTED--LTSSAGVKRCRSIVMMLERAAKVLGKGGDTSTEEERVLMEEVHDAVSDLVELITSYQNKSKLGKVLTSTLFKRRQDELNAVIDRAIWGLHLGLQVQVGHDVAHLV------KRSTAEAQAQAXXXXXXXXXXXXXXXTLRSRRQRKLDQIEIPEEHVSITTEVL 845
BLAST of mRNA_Ecto-sp13_S_contig9979.21627.1 vs. uniprot
Match: D7FL57_ECTSI (Hypothetical leucine rich repeat kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL57_ECTSI) HSP 1 Score: 205 bits (522), Expect = 3.290e-54 Identity = 111/203 (54.68%), Postives = 150/203 (73.89%), Query Frame = 3 Query: 309 VGYGQTVMAAAQELAQHCQIPGVSEAAKAVSILERLVSGSRDYAVRGDAGVKQCRSIVIMLERAAK----GGDTNGEAA*ALMEDVHDAVCDLVELIRTYQSKNRLSKMLMSTLFKQRQDELNAVVDRAILRLHLGLQVQVGHDVSAVKEVMRRHKEAI-----------SESLAEARSARRQRRIDQLEIPEDHMLITNKVL 872 +G G+ V AAQELA HCQIPGVSEAA AV ++ LV+ RD A ++ ++QC ++V+ L+RAAK GGDT GE A ++EDVH A+ DLV+LI+TYQSKN+LS++ MSTLFK+RQ+ELNA+VD+A++RL LGLQ+QVG DV AVK+ KE I SES+AEAR +RQR++DQ+EIP +++ ITN++L Sbjct: 509 IGLGRAVFEAAQELAHHCQIPGVSEAATAVCMMANLVTDGRDNARASESRLRQCSTVVMALKRAAKVADKGGDTIGEVARGMIEDVHGAIFDLVQLIKTYQSKNKLSRLFMSTLFKRRQEELNAIVDQAMMRLQLGLQLQVGQDVGAVKDKFDSVKEGIDLYQLSLSEAASESVAEARRVKRQRKLDQVEIPAEYLSITNELL 711
BLAST of mRNA_Ecto-sp13_S_contig9979.21627.1 vs. uniprot
Match: D7G7F2_ECTSI (Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs/ leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F2_ECTSI) HSP 1 Score: 204 bits (519), Expect = 1.320e-53 Identity = 111/203 (54.68%), Postives = 151/203 (74.38%), Query Frame = 3 Query: 309 VGYGQTVMAAAQELAQHCQIPGVSEAAKAVSILERLVSGSRDYAVRGDAGVKQCRSIVIMLERAAK----GGDTNGEAA*ALMEDVHDAVCDLVELIRTYQSKNRLSKMLMSTLFKQRQDELNAVVDRAILRLHLGLQVQVGHDVSAVKEVMRRHKEAI-----------SESLAEARSARRQRRIDQLEIPEDHMLITNKVL 872 +G G+ V+AAAQEL HCQIPGVSEAA AV ++ LV+ RD A ++ ++QC ++V+ L+RAAK GGDT GE A ++EDVH A+ DLV+LI+TYQSKN+LS++ MSTLFK+RQ+ELNAVVD+AI+RL LGLQ+QVG DV AVK+ + KE I SES+AE R +RQR++DQ+EIP +++ IT+++L Sbjct: 687 IGLGRAVLAAAQELVHHCQIPGVSEAATAVCMMATLVTDGRDNARASESRLRQCSTVVMALKRAAKVADKGGDTIGEVARGMIEDVHGAIFDLVQLIKTYQSKNKLSRLFMSTLFKRRQEELNAVVDQAIMRLQLGLQLQVGQDVGAVKDKLDSVKEGIDLYQLSLSEAASESVAEDRRVKRQRKLDQVEIPAEYLSITDELL 889 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9979.21627.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9979.21627.1 >prot_Ecto-sp13_S_contig9979.21627.1 ID=prot_Ecto-sp13_S_contig9979.21627.1|Name=mRNA_Ecto-sp13_S_contig9979.21627.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=122bp MIRLRSLHTVNVYGAMTSLPNRLVLVMELLAGGDLRSVLKRAEHPLPEAQback to top mRNA from alignment at Ecto-sp13_S_contig9979:2..3536- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9979.21627.1 ID=mRNA_Ecto-sp13_S_contig9979.21627.1|Name=mRNA_Ecto-sp13_S_contig9979.21627.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3535bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9979:2..3536- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9979:2..3536- >mRNA_Ecto-sp13_S_contig9979.21627.1 ID=mRNA_Ecto-sp13_S_contig9979.21627.1|Name=mRNA_Ecto-sp13_S_contig9979.21627.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=366bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9979:2..3536- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |