mRNA_Ecto-sp13_S_contig997.21615.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig997.21615.1 vs. uniprot
Match: D7FM51_ECTSI (FAM194 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM51_ECTSI) HSP 1 Score: 617 bits (1590), Expect = 2.370e-208 Identity = 333/352 (94.60%), Postives = 341/352 (96.88%), Query Frame = 3 Query: 1389 AGPSSRASVSGAEKYRMVRVDFAEHRATAELYGVQALPAFLMFQGGRLAWAGTLGGNPLKAAPPAGATGGRRVLLVEPCAKRQISTERALRKFGCSWDLVLNAPQALLRIQQVARTNSMASDSGNAASPNGEGYGVLMVSNALGAAEVIALEKALHGGGAGFSGSGADSVVVGLAHVQGDPSAVGIAALRVVSAGFTEAADGKRAVLSPHLALVADVAVTTPVRASALEAVFDRCCNRRKDDAGVAGGGGKGADGKGGVSLSMSASCSALEGGDGRYKGVTPSRLLQKMEEVGAQVAMGIFASNQATKAGRQHRPGRGGAASSAGKGGILLSAQETSCKGFLLERSTLQRIA 2444
AGPSSRASVSGAEKYRMVRVDFAEHRATAELYGVQALPAFLMFQGGRLAW GTLGG+PLKAAPPAGA GGRRVLLVEPCAKRQISTERALR+FGCSWDLVLNAPQALLRIQ VARTNSMASDSGNAASPNGEGYGVLM+SNALGAAEVIALEKALHGGGAGFSG GADSVVVGLAHVQGDPSA+G AALRVVSAGFTEAADGKRAVLSPHLALVADVAV+TPVR SALEAVFDRCCNR K+DA VAG GGK DGKGGVSLSMSASCSALEGGDGRYKGVTPSRLLQKMEEVGAQ+AMGIFASNQATKAGRQHRPGRGGAA+SAGKGGILLSAQETSCKGFLLERSTLQRIA
Sbjct: 395 AGPSSRASVSGAEKYRMVRVDFAEHRATAELYGVQALPAFLMFQGGRLAWVGTLGGSPLKAAPPAGAAGGRRVLLVEPCAKRQISTERALRRFGCSWDLVLNAPQALLRIQ-VARTNSMASDSGNAASPNGEGYGVLMISNALGAAEVIALEKALHGGGAGFSGGGADSVVVGLAHVQGDPSAMGSAALRVVSAGFTEAADGKRAVLSPHLALVADVAVSTPVRTSALEAVFDRCCNRPKEDASVAGVGGKRGDGKGGVSLSMSASCSALEGGDGRYKGVTPSRLLQKMEEVGAQLAMGIFASNQATKAGRQHRPGRGGAAASAGKGGILLSAQETSCKGFLLERSTLQRIA 745
BLAST of mRNA_Ecto-sp13_S_contig997.21615.1 vs. uniprot
Match: A0A7S2RJV1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJV1_9STRA) HSP 1 Score: 194 bits (492), Expect = 1.550e-50 Identity = 155/464 (33.41%), Postives = 216/464 (46.55%), Query Frame = 1 Query: 49 YPSGRLASDFKEDGSGCIYYPSGLVAVCKGVVDG-RGRYYVYGE--------------DRRS---------------TPLGAVNEHGEGFFL-----GPSGVRLALSKVGGLITNRHGYIAREWRYDP---GAHMPLPTSVLDVKLNNSINFEFLDRRDMRIKFLHEGISHELDAGVHPKREGTYLDNRIRLPGGG----LEPQIQRVSLMSRQQAFGKTMKAKRDRLKPRSRNLVGACKSLVASLENA---HSGTHPKNVEPFPDPSWKHDALTATYGELPRIRSTGLEVGPTHGLGSMIYDNDDDVRGGPGMRRSRSWGGGAGVRGXXXXXXXXXAFAAASRLRKGGKWLGELDVRLQLSAENPLLKRSNLLQAASGRYAEEIVVPGAKTSVSNPTGKTTVPGVPLRKVPASSRLRALLEEEAAPDQLVTVLGVRGDDPACNKVQTIAELANSFLVQGLSSS 1305
YP+G+ A F DGSG YYPSG A+C V + R Y+Y + DRRS T L A++E+ GF + G G R+ +K G LI+ G I+++W++D A P P + + LN ++F + DR + + F EG + LD G+ +R +YLD+ R+ G L PQI+ +L RQQ F M AKR L P+S NL +VA LE +S H + F P WK +L T GE+PR+ TG E G T+G G +Y + R A +G A R GG +LG+++VR + NPLL+R+ +L A+SGRY E++VVPG K NPTGK L V S L L QLV + +R DD C ++A + N L +GL SS
Sbjct: 7 YPNGKSAFSFLPDGSGFAYYPSGRPAICVSTVSSYQNRCYIYDDIPAPHLPTSSAGAVDRRSXXXXXXXXXPRRKRETMLCALDENVIGFAVDSSGGGNHGRRMVFTKEGCLISEADGRISKQWKWDATLQNAGTP-PMEPVVLVLNKFMSFSYTDRFTIEVAFKCEGATCRLDLGMKLRRLDSYLDHADRMTSGPHFGKLIPQIEHRTLQQRQQDFSLAMSAKRSILNPKSENLSDKVSHIVAELEKTFDQYSAEH--HTTRFLQPEWKTQSLDMTLGEIPRLPLTGTETGKTNGFGETLYMDKGHYRD-------------AEEKGETKRVPEHLLDA-----RTGG-FLGDVEVRNAVRRVNPLLERTGVLNASSGRYCEDLVVPGGKAHALNPTGKMECLRADLPIV-RSKELETFLAS-CPSSQLVVCVCLREDDRQCRSAASVAGVVNGMLQRGLVSS 446
BLAST of mRNA_Ecto-sp13_S_contig997.21615.1 vs. uniprot
Match: A0A2D4BJD4_PYTIN (FAM194 domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJD4_PYTIN) HSP 1 Score: 152 bits (385), Expect = 1.240e-35 Identity = 126/412 (30.58%), Postives = 184/412 (44.66%), Query Frame = 1 Query: 61 RLASDFKEDGSGCIYYPSGLVAVCKGVVDGRGRYYVYGEDR-RSTPLGAVNEHGEGFFLGPSGVRLALSKVGGLITNRHGYIAREWRYDPGAHMP--LPTSVLDVKLNNSINFEFLDRRDMRIKFLHE-GISHELDAGVHPKREGTYLDNRIRLPGGGLEPQI---QRV-SLMSRQQAFGKTMKAKRDRLKPRSRNLVGA-CKSLVASLENAHSGTHPKNVEPFPDPSWKHDALTATYGELPRIRSTGLEVGPTHGL-GSMIYDNDDDVRGGPGMRRSRSWGGGAGVRGXXXXXXXXXAFAAASRLR--KGGKWLGELDVRLQLSAENPLLKRSNLLQAASGRYAEEIVVPGAKTSVSNPTGKTTVPGVPLRKVPASSRLRALLEEEAAPDQLVTVLGVRGDDPACNKVQTI 1260
+LA D DG G YY SG VA C V+ R + + ED + T L +EH G P G +L L++ GG+I I ++WR+DP A P + + LN+++ F F DR +M +KF G++ D G +R +YLD R ++ Q V +L RQ+ KR + KPRSR+L K++V+ LE+ V P D WK A + E+PR+ +TG E+G T L GS + ND A + RL+ + GKWLG +++ ++ ENP L R L ASGRYA E+ V G P +P + A+++L A L D+LV V +R DDP + +
Sbjct: 22 QLAVDLDADGCGFCYYESGRVAACVNRVNDYQRSFQFYEDNAKRTLLATFDEHAIGSAGRPKGKKLLLTRDGGMILQSDDVIVKQWRWDPKAQHAGSAPLESVVIALNDALLFTFKDRSNMTVKFAPAPGVAVTFDCGERLRRTDSYLDXATRATHXAQRGKLVIAQDVPTLQQRQKQIELASIEKRSKQKPRSRDLSHEQLKTIVSRLEDDFDRYEGCRVTPCADGDWKDAARARSLREIPRLPTTGTEIGNTPTLFGSPVQPND--------------------------------ASESLRRLQHPENGKWLGSVELHAKIVQENPTLARKGPLTNASGRYARELAVAGYVNG-HRPAMSEHLPVI------AAAQLDAFLRTACTADELVVVACLRTDDPQSRAIDQL 394
BLAST of mRNA_Ecto-sp13_S_contig997.21615.1 vs. uniprot
Match: A0A2R5GSH8_9STRA (FAM194 domain-containing protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GSH8_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.740e-27 Identity = 124/441 (28.12%), Postives = 188/441 (42.63%), Query Frame = 1 Query: 46 YYPSGRLASDFKEDGSGCIYYPSGLVAVCKGVVD-GRG---RYYVYGEDRRSTPLGAVNEHGEGFFL----GPSGVRLALSKVGGLITNRHGYIAREWRYDPGAHMP--LPTSVLDVKLNNSINFEFLDRRDMRIKFLHEGISHELDAGVHPKREGTYLDN----RIRLPGGGLEPQIQRVSLMSRQQAFGKTMKAKRDRLKPRSRNLVG--ACKSLVASLENAHSGTHPKNVE------PFPDPSWKHDALTATYGELPRIRSTGLEVG--PTHGLGSMIYDNDDDVRGGPGMRRSRSWGGGAGVRGXXXXXXXXXAFAAASRLRKGGK----WLGELDVRLQLSAENPLLKRSNLLQAASGRYAEEIVVPGAKTSVSNPTGKTTVPGVPLRKVPASSRLRALLEEEAAPDQLVTVLGVRGDDPACNKVQTIAELANSFL 1284
Y SGR A +YYP G VA + G G ++Y Y D T + +++E+ G P G+RL ++K GGL++ G I + W++D A LP L + LN+ + F R D+ ++F+ EG+SH G +R +YL R G L P+I SL RQ+ + A R+ KP SRN+ + ++ LE+A + + +E P+ D W+ +A T E+PRI TG E G PTH + D A A R+ G W EL VR +L NP LKR +L++ASGRY+ ++ V + G LRK+P + A P++LV V+ +R DD C + + + E+ + L
Sbjct: 6 YSSSGRKAFLLANGQVSQVYYPDGRVAAVVAQSNTGNGDKNKFYFYDRDAAGTLVCSLDENAVGCANDSTGNPEGMRLVMTKTGGLLSRNEGTILKRWKWDRKAQQSGELPDMPLRICLNDHLVLTFNGRDDIEVRFVCEGVSHLFQCGQQLRRRQSYLSTCEIVRHGAHRGKLIPRIPTKSLQDRQRDLVQEFAALRNINKPASRNIRHNPEVREVMHKLEDAFE-PYQERIESGAYTTPYLDGEWRREAFEKTMAEVPRISETGHETGGPPTHAELCGVVPQD-----------------------------RLFAEAQDGRMSPLGPLPVTWPTELQVRQELRKINPALKRGFMLRSASGRYSRDLPV------------HVDLQG--LRKLPPVTPATLDQTLNAHPNELVVVVCLREDDQLCVRARQLFEMIEADL 402
BLAST of mRNA_Ecto-sp13_S_contig997.21615.1 vs. uniprot
Match: A0A7S1GB45_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GB45_9STRA) HSP 1 Score: 121 bits (304), Expect = 4.480e-25 Identity = 118/427 (27.63%), Postives = 175/427 (40.98%), Query Frame = 1 Query: 190 TPLGAVNEHGEGFFLGPSGVR------LALSKVGGLITNRHGYIAREWRYDPGAHMP--LPTSVLDVKLNNSINFEFLDRRDMRIKFLHEGISHELDAGVHPKREGTYLDNRIRLPGGGLEPQ---IQRVSLMSRQQAFGKTMKAKRDRLKPRSRNL--VGACKSLVASLENAHSGTHPKNVE-------PFPDPSWKHDALTATYGELPR-------------------IRSTGLEVGPTHGLGSMIYDNDDDVRGGPGMRRSRSWG---------------------GGAGVRGXXXXXXXXXAFAAASRLRKGGKWLGELDVRLQLSAENPLLKRSNLLQAASGRYAEEIVVPGAKTSVSNPTGKTTVPGVPLRKVPA--SSRLRALLEEEAAPDQLVTVLGVRGDDPACNKVQTIAELANSFL 1284
T L A+NEH GF + S + +SK G + + G + W +D G P + +LN + F+F R D+ + F +G+S + G +R +YLD + GG + + + +L R + F + K R +KP SRN+ + ++ASLE H ++ +E PF W+ AL T E+P+ +R+ G P G + D GG G + G G G R FAA KGG+WLGELD++ +++ NP+L+RS L+ ASGRY ++ V K TV RK+P + L L E A PDQLV V +R DDP C + Q + E N L
Sbjct: 107 TLLCALNEHIVGFVVDRSVDERCVTPGMVMSKDGASLIDARGNTYKSWLWDSGRQGAGTAPAEPVVFRLNRWLTFKFTSREDIVVSFSCDGVSRDFQMGERFRRTDSYLDKAVPAGGGQVGKKAVVVDAPTLQERTRIFNEEAKYSRMAVKPDSRNIRRFTEIRDVMASLET-HFKSYEDRIESGEWQTQPFAAAGWREGALAQTMREVPQHAAAVTADNPDGATELGATLRAAGHVASPFELTGGSL-----DATGGGGGGLGATSGSXVTAATDXXXXXXXXXXXXXGAGGAR--ADVGGAMGGFAAG----KGGRWLGELDIKRRIAGANPVLERSTQLRGASGRYCVDVPV----------ESKGTV----FRKLPVVRARDLDKYLSEIARPDQLVLVACLREDDPLCRRAQQLLEHVNGTL 507 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig997.21615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig997.21615.1 >prot_Ecto-sp13_S_contig997.21615.1 ID=prot_Ecto-sp13_S_contig997.21615.1|Name=mRNA_Ecto-sp13_S_contig997.21615.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=481bp MSPQGGVGTKTDNAVYYPSGRLASDFKEDGSGCIYYPSGLVAVCKGVVDGback to top mRNA from alignment at Ecto-sp13_S_contig997:4516..11761- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig997.21615.1 ID=mRNA_Ecto-sp13_S_contig997.21615.1|Name=mRNA_Ecto-sp13_S_contig997.21615.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7246bp|location=Sequence derived from alignment at Ecto-sp13_S_contig997:4516..11761- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig997:4516..11761- >mRNA_Ecto-sp13_S_contig997.21615.1 ID=mRNA_Ecto-sp13_S_contig997.21615.1|Name=mRNA_Ecto-sp13_S_contig997.21615.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1443bp|location=Sequence derived from alignment at Ecto-sp13_S_contig997:4516..11761- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |