mRNA_Ecto-sp13_S_contig9963.21610.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9963.21610.1 vs. uniprot
Match: D8LKJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKJ0_ECTSI) HSP 1 Score: 298 bits (764), Expect = 1.290e-100 Identity = 154/156 (98.72%), Postives = 155/156 (99.36%), Query Frame = 1 Query: 1 MTRQTASEDLSSTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYIEYINMMMND 468 MTRQTASEDLS TELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNY+EYINMMMND Sbjct: 1 MTRQTASEDLSPTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYVEYINMMMND 156
BLAST of mRNA_Ecto-sp13_S_contig9963.21610.1 vs. uniprot
Match: F0YC57_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC57_AURAN) HSP 1 Score: 234 bits (598), Expect = 1.900e-75 Identity = 115/147 (78.23%), Postives = 139/147 (94.56%), Query Frame = 1 Query: 28 LSSTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYIEYINMMMND 468 LS+ ELAEFREIF+LVDRDGGGT+TKEELGELMDTLGI+ATPEE+DLMI EIDQDNNGEIDFEEFVAVMSRKV+A+YTADQVK+AFKVFEG++P GHIK++ +++ALT G+++LT+EQAHDLVSQLEPD +G++NY EY+NMMM+D Sbjct: 5 LSNEELAEFREIFNLVDRDGGGTITKEELGELMDTLGIDATPEEIDLMIHEIDQDNNGEIDFEEFVAVMSRKVSATYTADQVKNAFKVFEGDAPSGHIKVDVLIRALTNDGTDKLTDEQAHDLVSQLEPDRSGLINYSEYVNMMMSD 151
BLAST of mRNA_Ecto-sp13_S_contig9963.21610.1 vs. uniprot
Match: A0A835YUG4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUG4_9STRA) HSP 1 Score: 231 bits (590), Expect = 4.210e-74 Identity = 116/158 (73.42%), Postives = 144/158 (91.14%), Query Frame = 1 Query: 1 MTRQTASED---LSSTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYIEYINMMMN 465 M+ + +SED L++ E+AEFREIF LVDRDGGGT+TK ELG+LMDTLGIEAT EE++LM+ EIDQDNNGEIDF+EFVAVMSRKVNASYT +QVK AFKVFEG++P G+IK+ES+++ALTTYG+E+LTEEQA +LVSQLEPDHNG+VNY+EY+N+MM+ Sbjct: 1 MSTRASSEDAYQLTAEEVAEFREIFSLVDRDGGGTITKVELGDLMDTLGIEATAEEIELMVAEIDQDNNGEIDFQEFVAVMSRKVNASYTPEQVKGAFKVFEGSAPSGYIKMESLVRALTTYGTEKLTEEQARELVSQLEPDHNGMVNYVEYVNIMMS 158
BLAST of mRNA_Ecto-sp13_S_contig9963.21610.1 vs. uniprot
Match: A0A6V1LFC1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LFC1_HETAK) HSP 1 Score: 231 bits (588), Expect = 1.000e-73 Identity = 112/152 (73.68%), Postives = 141/152 (92.76%), Query Frame = 1 Query: 13 TASEDLSSTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYIEYINMMMND 468 T + +LS EL EFREIF+LVDRDGGG++TKEELG+LMDTLGI+A+PEE+DLMI+EIDQDNNGEIDF EFVAVMSRKVNA+YT++QVK+AF+VFEG SPPG+IK++++ KAL TYG+E+LT+EQA +LVSQLEPD +G++NY+EY+NMMMND Sbjct: 14 TRTLNLSEEELQEFREIFNLVDRDGGGSITKEELGDLMDTLGIDASPEEIDLMINEIDQDNNGEIDFNEFVAVMSRKVNATYTSEQVKNAFRVFEGASPPGYIKVDALAKALQTYGAEKLTDEQARELVSQLEPDAHGLINYVEYVNMMMND 165
BLAST of mRNA_Ecto-sp13_S_contig9963.21610.1 vs. uniprot
Match: A0A8J2SL49_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SL49_9STRA) HSP 1 Score: 221 bits (563), Expect = 4.040e-70 Identity = 108/147 (73.47%), Postives = 136/147 (92.52%), Query Frame = 1 Query: 28 LSSTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYIEYINMMMND 468 L+ ELAEFREIF+LVD+DGGGT++KEELGELM+TLGI+ATPEE+DLMI EID+DNNG IDF+EFVAVMSRKV+A+YTA+QV+ AF+VFE +PPGHIK+ES+++ALTT GS++L+EEQA DLV+QLEPD +G+VNY EY+NMMM+D Sbjct: 5 LTPEELAEFREIFNLVDKDGGGTISKEELGELMETLGIDATPEEIDLMIAEIDEDNNGVIDFDEFVAVMSRKVSATYTAEQVRGAFRVFESGAPPGHIKVESLVRALTTDGSDKLSEEQARDLVAQLEPDRDGLVNYKEYVNMMMSD 151
BLAST of mRNA_Ecto-sp13_S_contig9963.21610.1 vs. uniprot
Match: A0A067BG90_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BG90_SAPPC) HSP 1 Score: 211 bits (536), Expect = 4.880e-66 Identity = 103/148 (69.59%), Postives = 132/148 (89.19%), Query Frame = 1 Query: 19 SEDLSSTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYIEYINMMM 462 +++LS TE+ EFREIF+LVDRD GG++TK ELGELMDTLGI +PEE+DLMI+EIDQD+NGEIDF+EFVAVMSRKVNA+Y+ADQVK++FK+FE S PG I++E ++ ALTTYGS++++EEQA +L+ QLEPD NG+VNY EY+NMMM Sbjct: 2 TQELSETEITEFREIFNLVDRDRGGSITKVELGELMDTLGINTSPEEIDLMINEIDQDSNGEIDFDEFVAVMSRKVNATYSADQVKASFKMFENPSTPGCIRVERLVSALTTYGSDKISEEQARELICQLEPDSNGLVNYEEYVNMMM 149
BLAST of mRNA_Ecto-sp13_S_contig9963.21610.1 vs. uniprot
Match: H3H091_PHYRM (Uncharacterized protein n=21 Tax=Oomycota TaxID=4762 RepID=H3H091_PHYRM) HSP 1 Score: 207 bits (526), Expect = 1.660e-64 Identity = 102/148 (68.92%), Postives = 132/148 (89.19%), Query Frame = 1 Query: 28 LSSTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGN-SPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYIEYINMMMND 468 LSS EL EFREIF+LVDRD GG++TK ELGELMDTLGI+ +PEE+DLMI+EIDQD+NGEIDF+EFVAVMSRKVNA+YT++QVK+AFK FEGN S PG IK + ++ ALTTYG+++++ +QA +L+SQLEPD +G +NY+EY+NMMM++ Sbjct: 5 LSSEELIEFREIFNLVDRDRGGSITKVELGELMDTLGIDTSPEEIDLMINEIDQDSNGEIDFDEFVAVMSRKVNATYTSEQVKTAFKAFEGNASAPGFIKADKLLIALTTYGADRISSDQAQELISQLEPDQHGNINYVEYVNMMMSE 152
BLAST of mRNA_Ecto-sp13_S_contig9963.21610.1 vs. uniprot
Match: A0A485KUA7_9STRA (Aste57867_11938 protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KUA7_9STRA) HSP 1 Score: 205 bits (522), Expect = 6.470e-64 Identity = 100/147 (68.03%), Postives = 129/147 (87.76%), Query Frame = 1 Query: 25 DLSSTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYIEYINMMMN 465 +LS E+AEFREIF+LVDRD GG++TK ELGELMDTLGI +PEE+DLMI+EIDQD+NGEIDF+EFVAVMSRKVNA+Y+ADQVK +F++FE + PG IK++ + +ALT YGS++L+ EQA +L+SQLEPD NG++NY EY+NMMM+ Sbjct: 4 ELSENEIAEFREIFNLVDRDRGGSITKAELGELMDTLGINTSPEEIDLMINEIDQDSNGEIDFDEFVAVMSRKVNATYSADQVKMSFRMFENPNTPGFIKVDRLHRALTMYGSDKLSSEQASELISQLEPDSNGMINYEEYVNMMMS 150
BLAST of mRNA_Ecto-sp13_S_contig9963.21610.1 vs. uniprot
Match: A0A7S1GDX7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDX7_9STRA) HSP 1 Score: 204 bits (520), Expect = 2.120e-63 Identity = 101/147 (68.71%), Postives = 129/147 (87.76%), Query Frame = 1 Query: 28 LSSTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYIEYINMMMND 468 L+ ELAEFREIF+LVD+DGGGT++K+EL ELM+TLGI A+PEEV+LMI+E+D+D +GEIDFEEFVAVMSRKVN+SYT DQVK+AFK+FEG +P G+IK+ ++ ALTTY SE +TE QA +L+SQLEPD NG+VNY EY+ MMM++ Sbjct: 20 LTDEELAEFREIFNLVDKDGGGTISKDELLELMETLGINASPEEVELMINEVDEDQSGEIDFEEFVAVMSRKVNSSYTPDQVKAAFKIFEGTAPSGYIKVGDLLTALTTYCSETVTEAQAAELISQLEPDTNGLVNYAEYVTMMMSE 166
BLAST of mRNA_Ecto-sp13_S_contig9963.21610.1 vs. uniprot
Match: A0A7S3H4J2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4J2_9STRA) HSP 1 Score: 196 bits (498), Expect = 1.960e-60 Identity = 97/140 (69.29%), Postives = 121/140 (86.43%), Query Frame = 1 Query: 28 LSSTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYIEY 447 LS+ E++EFREIF+LVD+DGGG++TK EL +LMDTLGI+A+PEE+D MI EIDQD NG+IDFEEFV VMSRKVNA+YT+DQVK AFKVFE + PGHIK E+++KAL TYG+E+LTE+QAH+LV QLE D G +NY +Y Sbjct: 1 LSAEEISEFREIFNLVDKDGGGSITKVELADLMDTLGIDASPEEIDAMIFEIDQDGNGDIDFEEFVTVMSRKVNATYTSDQVKGAFKVFEAQANPGHIKAEALIKALCTYGTEKLTEDQAHELVGQLEVDAAGYINYSDY 140 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9963.21610.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9963.21610.1 >prot_Ecto-sp13_S_contig9963.21610.1 ID=prot_Ecto-sp13_S_contig9963.21610.1|Name=mRNA_Ecto-sp13_S_contig9963.21610.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=157bp MTRQTASEDLSSTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATback to top mRNA from alignment at Ecto-sp13_S_contig9963:2832..6080+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9963.21610.1 ID=mRNA_Ecto-sp13_S_contig9963.21610.1|Name=mRNA_Ecto-sp13_S_contig9963.21610.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3249bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9963:2832..6080+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9963:2832..6080+ >mRNA_Ecto-sp13_S_contig9963.21610.1 ID=mRNA_Ecto-sp13_S_contig9963.21610.1|Name=mRNA_Ecto-sp13_S_contig9963.21610.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=471bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9963:2832..6080+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |