mRNA_Ecto-sp13_S_contig9957.21605.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9957.21605.1 vs. uniprot
Match: D7FHS8_ECTSI (SNF2 helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS8_ECTSI) HSP 1 Score: 717 bits (1851), Expect = 1.100e-234 Identity = 419/521 (80.42%), Postives = 423/521 (81.19%), Query Frame = 1
Query: 1 QVAVYNGVREILSFGEKAKLASSKRRLNXXXXXXXXXXXXXXXXXSRNSDDDATNTGAANNTVNGXXXXXXXXXXXXXXXXXRTNRDQPQDKLLRDGPDQQPAPGDDQPPPAQEDGTPLEPGTGRATPETTGSPVAPAAASGPGQEATXXXXXXXXXXXXXXVADSRSSSDPFALLSPKNLASYDVVLTTFEVLRAEVHHAESRFAGALGDGGSAVAVGRPSLRRKKRRYRVIPSPLPALKWWRVVVDEAHMVESTTQETAKMALKIPATHRWCVTGTPIGKGSIDDLYGLLVFLKASPLDDKAVWTKAIREPIDRRLPGAMERLVSALKPVMWRVTKASVAAQINIPPQTCVDRRLSFSSVEEHFYRKQHRAAAADAQKTAREGGSGTEEKMFNSLLALRQACCHPCIGSGGIETSGGGSRLGGGGAEGRWLSMDQILDRLIDAERLKAEEAQRKAILNLNASGAVARLVLQAKERRCDAASTAGAXXXXXXXXXETAETLLRDSVSSYQRALQMAEDNR 1563
+VAVYNGVREILS GEKAK AS XXXXXXXXXXXXX SRNSD DATNT AANNTV+G RTNRDQPQD L RD DQQP PGD PVA AAASG GQEAT DS SS DPFALLSPKNLASYDVVLTTFEVLRAEVHHAES+FAGALGDGGSAVAVGRPSLRRKKR YRVIPSPLPALKWWRVVVDEAHMVESTTQETAKMALKIP THRWCVTGTPIGKGSIDDLYGLLVFLKASPLDDKAVWTKAIREPIDRRLPGAMERLVSALKPVMWRVTKASVAAQINIPPQTCVDRRLSFSSVEEHFYRKQHRAAAADAQKTAREGGSGTEEKMFNSLLALRQACCHPCIGSGGIETSGGGSRLGGG AEGRWLSMDQILDRLIDAERLKAEEAQRKAILNLNASGAVARL+LQAKERR DAA TA A ETAETLLRDSVSSYQRALQMAEDNR
Sbjct: 614 KVAVYNGVREILSMGEKAKRASXXXXXXXXXXXXXXXXXXXTD--SRNSDHDATNTSAANNTVSGKRRDTSTTPAAGADQGSRTNRDQPQDTLPRDDLDQQPVPGDXXXXXXXXXXXXXXXXXXXXXXXXXXHPVAQAAASGTGQEATAASSATDVSGGGSDT-DS-SSGDPFALLSPKNLASYDVVLTTFEVLRAEVHHAESKFAGALGDGGSAVAVGRPSLRRKKR-YRVIPSPLPALKWWRVVVDEAHMVESTTQETAKMALKIPTTHRWCVTGTPIGKGSIDDLYGLLVFLKASPLDDKAVWTKAIREPIDRRLPGAMERLVSALKPVMWRVTKASVAAQINIPPQTCVDRRLSFSSVEEHFYRKQHRAAAADAQKTAREGGSGTEEKMFNSLLALRQACCHPCIGSGGIETSGGGSRLGGGSAEGRWLSMDQILDRLIDAERLKAEEAQRKAILNLNASGAVARLILQAKERRSDAARTADAAAGEGEGGGETAETLLRDSVSSYQRALQMAEDNR 1129
BLAST of mRNA_Ecto-sp13_S_contig9957.21605.1 vs. uniprot
Match: A0A6H5JYY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYY0_9PHAE) HSP 1 Score: 635 bits (1638), Expect = 1.140e-204 Identity = 385/528 (72.92%), Postives = 390/528 (73.86%), Query Frame = 1
Query: 1 QVAVYNGVREILSFGEKAKLASSKRRLNXXXXXXXXXXXXXXXXX--SRNSDDDATNTGAANNTVNGXXXXXXXXXXXXXXXXXRTNRDQPQDKLLRDGPDQQPAPGDDQPPPAQEDGTPLEPGTGRATPETTGSPVAPAAASGPGQEATXXXXXXXXXXXXXXVADSRSS-----SDPFALLSPKNLASYDVVLTTFEVLRAEVHHAESRFAGALGDGGSAVAVGRPSLRRKKRRYRVIPSPLPALKWWRVVVDEAHMVESTTQETAKMALKIPATHRWCVTGTPIGKGSIDDLYGLLVFLKASPLDDKAVWTKAIREPIDRRLPGAMERLVSALKPVMWRVTKASVAAQINIPPQTCVDRRLSFSSVEEHFYRKQHRAAAADAQKTAREGGSGTEEKMFNSLLALRQACCHPCIGSGGIETSGGGSRLGGGGAEGRWLSMDQILDRLIDAERLKAEEAQRKAILNLNASGAVARLVLQAKERRCDAASTAGAXXXXXXXXXETAETLLRDSVSSYQRALQMAEDNR 1563
+VAVYNGVREILS GEKAKLASS RR + SR+SDDDA +TG ANNTVNG XXXXXXXXXXXX QPQD L RDGPDQQP PGDD AT A SDPFALLSPKNLASYDVVLTTFEVLRAEVHHAESRFAGALGDGGSAVAVGRPSLRRKKR YRVIPSPLPALKWWRVVVDEAHMVESTTQETAKMALKIPATHRWCVTGTPIGKGSIDDLYGLLVFLKASPLDDKAVWTKAIREPIDRRLPGAMERLVSALKPVMWRVTKASVAAQINIPPQ HRAAAADAQKTAREGGSGTEEKMFNSLLALRQACCHPCIGSGGIETSGGGSRLGGGGAEGRWLSMDQILDRLIDAERLKAEEAQRKAILNLNASGAVARL+LQAKERR AA ETAETLLRDSVSSYQRALQMAEDNR
Sbjct: 414 KVAVYNGVREILSLGEKAKLASSTRRNSKRRRSINGSTTPATTAGTGSRDSDDDANDTGTANNTVNGKRREAXXXXXXXXXXXXXXXXXQPQDALFRDGPDQQPVPGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAASNATEGSRSGGSDAXXXXXXXXXXSDPFALLSPKNLASYDVVLTTFEVLRAEVHHAESRFAGALGDGGSAVAVGRPSLRRKKR-YRVIPSPLPALKWWRVVVDEAHMVESTTQETAKMALKIPATHRWCVTGTPIGKGSIDDLYGLLVFLKASPLDDKAVWTKAIREPIDRRLPGAMERLVSALKPVMWRVTKASVAAQINIPPQ--------------------HRAAAADAQKTAREGGSGTEEKMFNSLLALRQACCHPCIGSGGIETSGGGSRLGGGGAEGRWLSMDQILDRLIDAERLKAEEAQRKAILNLNASGAVARLILQAKERRSAAAGEG-------QGDGETAETLLRDSVSSYQRALQMAEDNR 913
BLAST of mRNA_Ecto-sp13_S_contig9957.21605.1 vs. uniprot
Match: A0A836C7R9_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7R9_9STRA) HSP 1 Score: 253 bits (646), Expect = 1.200e-69 Identity = 137/312 (43.91%), Postives = 187/312 (59.94%), Query Frame = 1
Query: 514 PFALLSPKNLASYDVVLTTFEVLRAEVHHAESRFAGALGDGGSAVAVGRPS-LRRKKRRYRVIPSPLPALKWWRVVVDEAHMVESTTQETAKMALKIPATHRWCVTGTPIGKGSIDDLYGLLVFLKASPLDDKAVWTKAIREPIDRRLPGAMERLVSALKPVMWRVTKASVAAQINIPPQTCVDRRLSFSSVEEHFYRKQHRAAAADAQKTAREGGSGTEE----KMFNSLLALRQACCHPCIGSGGIETSGGGSRLGGGGAEGRWLSMDQILDRLIDAERLKAEEAQRKAILNLNASGAVARLVLQAKERR 1434
P+ALL P LAS DVVLTT++VLRAEVHHA + R+ R Y+V+PSPL AL WWRV +DEA MVE+T + A+MA +PA +RW V+GTP+G G ++DLYGLL+FL P ++ +W A++ P++ RLPGAMERL+ L ++WR TK V +Q+ +PPQ RRL FSS+E +YR+QH A A +++T + K+ +L LRQACCHP +G G+ G LGG G GR +++ QI D L+D ER EA RK + NA V R + + R+
Sbjct: 927 PYALLDPATLASCDVVLTTYDVLRAEVHHAVAXXXXXXXXXXXXXXXXXXXRTMRRARAYKVVPSPLTALLWWRVAMDEAQMVETTVSDAAQMATLLPAVNRWAVSGTPVGHGRVEDLYGLLLFLGQDPFSERQLWRHALQRPVEGRLPGAMERLMRVLDGLLWRTTKRCVTSQLLLPPQVEDVRRLQFSSIEREYYRRQHAAVVALSRQTLEHDKRAVSQQGQLKLSEGMLQLRQACCHPQVGIKGL-----GRTLGGRG--GRVMTLAQIHDHLVDQERTTGTEAARKLVFATNALAGVTRAEAELRIRQ 1231
BLAST of mRNA_Ecto-sp13_S_contig9957.21605.1 vs. uniprot
Match: A0A7S2UAP0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAP0_9STRA) HSP 1 Score: 233 bits (593), Expect = 5.220e-63 Identity = 151/368 (41.03%), Postives = 207/368 (56.25%), Query Frame = 1
Query: 505 SSDPFALLSPKNLASYDVVLTTFEVLRAEVHHAESRFAGALGDGGSAVAVGRPSLR-RKKRRYRVIPSPLPALKWWRVVVDEAHMVESTTQETAKMALKIPATHRWCVTGTPIGKGSIDDLYGLLVFLKASPLDDKAVWTKAIREPIDRRLPGAMERLVSALKPVMWRVTKA--SVAAQINIPPQTCVDRRLSFSSVEEHFYRKQ--HRAAAADA---QKTAREGGSGTEEKMFNSLLALRQACCHPCIGSG--------GIETSGGGSRLGGGGAEGRWLSMDQILDRLIDAERLKAEEAQRKAILNLNASGAVARLVLQAKERRCDAASTAGAXXXXXXXXXETAETLLRDSVSSYQRALQMAEDN 1560
+++PF L PK LA DVVLTTF+VL ++ H++ + A G P+ R RK++ YR++PSPL ++ WWR+ +DEA VE+TT +++MAL + + RWCVTGTPIG+G +DDLYGLL+FLK P DK W K + R GA++R LK + WR TKA SV Q+ IP Q L FSSVE HFY++Q AADA +K + + E + + L LR ACCHP +GS S G SRL G G L+MDQILDRLID + K EEAQR +L+ NA ++A+L ++A ++ E L+R S + Y +AL +AE+N
Sbjct: 723 ANNPFQLAIPKYLADADVVLTTFQVLMTDLGHSKD----------NPYASGSPTRRLRKRKSYRIVPSPLTSIFWWRICLDEAQRVETTTAASSRMALYLESRFRWCVTGTPIGRGKVDDLYGLLLFLKLVPFADKR-WFKHCLKLCHR---GALDRTQIMLKEIFWRSTKANHSVRQQMGIPEQVEKKIMLKFSSVERHFYQQQLEKTIVAADAVAGEKNSYRSNTKNEAMLSHHLHCLRAACCHPQVGSNHSFGRVKKNSSRSVGRSRLNGRGGVSSVLTMDQILDRLIDDAKGKCEEAQRVVLLHTNALASMAKLKVEAMR------------FGLISLEQQSEEDLIRQSRTFYTQALDLAEEN 1064
BLAST of mRNA_Ecto-sp13_S_contig9957.21605.1 vs. uniprot
Match: A0A1Z5KGE3_FISSO (E3 ubiquitin-protein ligase SHPRH n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KGE3_FISSO) HSP 1 Score: 221 bits (562), Expect = 1.330e-58 Identity = 145/372 (38.98%), Postives = 203/372 (54.57%), Query Frame = 1
Query: 496 SRSSSDPFALLSPKNLASYDVVLTTFEVLRAEVHHAESRFAGALGDGGSAVAVGRPSLRRKKRRYRVIPSPLPALKWWRVVVDEAHMVESTTQETAKMALKIPATHRWCVTGTPIGKGSIDDLYGLLVFLKASPLDDKAVWTKAIREPIDRRLPGAMERLVSALKPVMWRVTKA--SVAAQINIPPQTCVDRRLSFSSVEEHFYRKQHRAAAADAQKTAREGGSGTEEKMFN-SLLA-----LRQACCHPCIGSGGIETSGGGSRLGGG---------GAEGRWLSMDQILDRLIDAERLKAEEAQRKAILNLNASGAVARLVLQAKERRCDAASTAGAXXXXXXXXXETAETLLRDSVSSYQRALQMAEDN 1560
+R S + LL PK LA+ DVVL TF+ L ++ H++ A G S + + +LRR+KR YRV+PSPL +++WWRV +DEA VE+ T +A+MALK+ A HRWCV+GTPIG+G ++DL+GLL+FL+ P A + K + G R+ + L+ V WR TKA V Q+ +P Q L+FSS+E+HFY +Q A + +G + K LLA LR ACCHP +GS G+ G++L G R ++M QIL R ID R K EE+QR IL+ N GA+ARL ++AK+R + E+ LLRDS YQ +L + E N
Sbjct: 659 TRKSDECIKLLHPKVLAAADVVLMTFDALMGDLGHSDDNKFIASGKEESLFSS-QCNLRRRKR-YRVVPSPLQSIEWWRVCLDEAQRVETPTAASARMALKLDAVHRWCVSGTPIGRGKLEDLFGLLLFLRVEPFCHSAWFKKCFGPSSPQSNIGC--RIATLLRHVFWRSTKALECVREQMGVPEQVETKTTLNFSSIEKHFYDRQLEETLATVEDVTERTKAGKKRKAVQIQLLAERLHKLRAACCHPQVGSSGLAH---GTKLRWATSSHQESEKGLASRVMTMSQILHRFIDDARQKCEESQRLVILHTNGMGAIARLKVEAKDRGIEV--------------KESDAELLRDSCRLYQESLDLGEAN 1009
BLAST of mRNA_Ecto-sp13_S_contig9957.21605.1 vs. uniprot
Match: B7FWI3_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FWI3_PHATC) HSP 1 Score: 212 bits (539), Expect = 1.390e-55 Identity = 137/368 (37.23%), Postives = 199/368 (54.08%), Query Frame = 1
Query: 508 SDPFALLSPKNLASYDVVLTTFEVLRAEVHHAE-SRF-AGALGDGGSAVAVGRPSLRRKKRRYRVIPSPLPALKWWRVVVDEAHMVESTTQETAKMALKIPATHRWCVTGTPIGKGSIDDLYGLLVFLKASPLDDKAVWTKAIREPIDRRLPGAMERLVSALKPVMWRVTKA--SVAAQINIPPQTCVDRRLSFSSVEEHFYRKQHRAAAA------DAQKTAREGGSGTEEKMFNSLLALRQACCHPCIGSGGIETSGGGSRLGGGGAEG-------RWLSMDQILDRLIDAERLKAEEAQRKAILNLNASGAVARLVLQAKERRCDAASTAGAXXXXXXXXXETAETLLRDSVSSYQRALQMAEDN 1560
SD L+ P LA D+VL TF+ L ++++H++ +RF AG + G+ R+++RYRV+PSPL ++WWR+ +DEA VE+ T ++A MALK+ HRWCV+GTPIG+G ++DLYGLL+FL+ P D A++ K + R G ER+ L V WR T SV Q+ +P Q L FSS+E+HFY +Q + + + S + + L LR ACCHP +GS GI G SRL G EG R ++MDQIL+R I+ +LK EE+QR A+++ NA A++ L ++AK+ E E L++ S YQ +L E N
Sbjct: 657 SDAIQLIHPARLADADIVLITFDTLMSDLNHSDDNRFLAGIRSEQGNL---------RRRKRYRVVPSPLTKIRWWRICLDEAQRVETPTAKSAIMALKLETDHRWCVSGTPIGRGRVEDLYGLLLFLRMLPFQDIALFLKCFS--LAHR--GIEERIQQLLCKVFWRSTSELDSVRRQMGVPEQVEEKVLLRFSSIEKHFYERQLEQTITLVGEITERESEGKRSNSNRLTTLADRLHKLRAACCHPQVGSSGIGR-GHASRLLGKRREGSMSSLNSRVMTMDQILERFIEEAKLKCEESQRLAVMHTNAMAALSTLKIEAKK-------------FFGVNVEEEDEILMKKSCDLYQESLMQTEKN 997
BLAST of mRNA_Ecto-sp13_S_contig9957.21605.1 vs. uniprot
Match: A0A7S1C0K5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C0K5_9STRA) HSP 1 Score: 208 bits (529), Expect = 1.540e-55 Identity = 136/354 (38.42%), Postives = 194/354 (54.80%), Query Frame = 1
Query: 523 LLSPKNLASYDVVLTTFEVLRAEVHHAESRFAGALGDGGSAVAVGRPSLRRKKRRYRVIPSPLPALKWWRVVVDEAHMVESTTQETAKMALKIPATHRWCVTGTPIGKGSIDDLYGLLVFLKASPLDDKAVWTKAIREPIDRRLPGAMERLVSALKPVMWRVTKA--SVAAQINIPPQTCVDRRLSFSSVEEHFYRKQH---RAAAADAQKTAREGGSGTEEKMFNSLLALRQACCHPCIGSGGI---ETSGGGSRLGGGGAEGRWLSMDQILDRLIDAERLKAEEAQRKAILNLNASGAVARLVLQAKERRCDAASTAGAXXXXXXXXXETAETLLRDSVSSYQRALQMAEDN 1560
L P+ LA DVVL TF+ LRAE+ R A S + R +RRYR++PSPLP++ +WR+V+DEA VE+ T +A+MA ++ HRWCVTGTP+G+G +DL+GLLVFL+ +PLD++ W A+ +P R + A + ++WR TKA V Q+ +P Q L FSS+E HFY +Q R A A S E++ + L LR ACCHP +G+G + + GG +L G L+MDQILD+LI+ R+ AEEAQR +L+ N A+ L + + RR DAA + E +LLR+ ++ Y R + E N
Sbjct: 343 LFHPEVLADADVVLMTFDALRAEL----DRSAPPEEQDSSPARI-----LRARRRYRILPSPLPSIDFWRIVLDEAQRVETPTAASAQMARRLRGRHRWCVTGTPVGRGRPEDLHGLLVFLEKAPLDNRRAWNAAM-DPAKARCGDVLRY---AFRGLLWRSTKAHSEVREQMAVPDQREERVELRFSSIERHFYARQFESARRAVRGAMVPGERVSSKKEKEAIHQLHRLRAACCHPQVGAGAMTNFRSKGGKQKLTSTSLTGGILTMDQILDKLINDSRMAAEEAQRIYVLHANVLAALPVLKAELRGRR-DAAHLS---------FPENEASLLREGLAHYLRTKALTETN 673
BLAST of mRNA_Ecto-sp13_S_contig9957.21605.1 vs. uniprot
Match: A0A7S4JPA2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JPA2_9STRA) HSP 1 Score: 211 bits (536), Expect = 2.720e-55 Identity = 143/374 (38.24%), Postives = 208/374 (55.61%), Query Frame = 1
Query: 502 SSSDPFALLSPKNLASYDVVLTTFEVLRAEV-HHAESRF-AGALGDGGSAVAVGRPSLRRKKRRYRVIPSPLPALKWWRVVVDEAHMVESTTQETAKMALKIPATHRWCVTGTPIGKGSIDDLYGLLVFLKASPLDDKAVWTKAIREPIDRRLPGAMERLVSALKPVMWRVTKAS--VAAQINIPPQTCVDRRLSFSSVEEHFYRKQ-HRAAAADAQKTAREGGSGTEEKM--FNSLLA-----LRQACCHPCIGSGGI----ETSGGGSRLGGG----GAEGRWLSMDQILDRLIDAERLKAEEAQRKAILNLNASGAVARLVLQAKE-RRCDAASTAGAXXXXXXXXXETAETLLRDSVSSYQRALQMAEDN 1560
+++ F L PK LA D+V+TTF+ L A++ H AE+ + A +G G RK++RYRV+PSPL ++ WWRV +DEA +E+ T +A+MAL++ A HRWCV+GTP+G+G +DDL+GLL+FL A P DK W +A R GAM R+ L ++WR TK++ V Q+ +P Q L SSVE+HFY++Q + ++ A G T+ + ++ LL+ LR ACCHP +G+ GI + G R G R LSMDQILDRL+ + K EE+QR AIL+ N ++ RL ++AK+ R D+ A LL+ SV SY L + ++N
Sbjct: 2 AATKQFYLAHPKRLAGADIVVTTFDALMADLGHSAENPYVAKPIGTGRGL---------RKRKRYRVVPSPLTSIDWWRVCLDEAQRIETPTAASARMALQLSARHRWCVSGTPVGRGKLDDLFGLLLFLGARPFGDKR-WFQAC---FSLRHRGAMGRIGHVLSDMLWRSTKSNDVVRRQMGVPEQVEKKVYLQLSSVEKHFYKQQLEKTIEVKNERDAVGGRKATKRRKDKYDGLLSQQIHRLRAACCHPQVGTSGIRRINKRGRKGQRTGSNDDSFSPNARVLSMDQILDRLVTDAKKKCEESQRIAILHTNGLASLGRLKVEAKKFGRPDSQPDA---------------VLLQQSVKSYLDNLHLMDEN 347
BLAST of mRNA_Ecto-sp13_S_contig9957.21605.1 vs. uniprot
Match: A0A2I0IRT8_PUNGR (Helicase ATP-binding domain-containing protein (Fragment) n=7 Tax=Punica granatum TaxID=22663 RepID=A0A2I0IRT8_PUNGR) HSP 1 Score: 211 bits (536), Expect = 3.070e-55 Identity = 123/311 (39.55%), Postives = 177/311 (56.91%), Query Frame = 1
Query: 541 LASYDVVLTTFEVLRAEVHHAESRFAGALGDGGSAVAVGRPSLRRKKRRYRVIPSPLPALKWWRVVVDEAHMVESTTQETAKMALKIPATHRWCVTGTPIGKGSIDDLYGLLVFLKASPLDDKAVWTKAIREPIDRRLPGAMERLVSALKPVMWRVTKASVAAQINIPPQTCVDRRLSFSSVEEHFYRKQHRAAAADAQKTARE------------GGSGTEE-----------KMFNSLLALRQACCHPCIGSGGIETSGGGSRLGGGGAEGRWLSMDQILDRLIDAERLKAEEAQRKAILNLNASGAVA 1404
L +YDV+LTT++VL+ ++ H R DGG R ++RY VIP+PL + WWR+ +DEA MVES T ++MAL++P+ HRWC+TGTPI + +DDLYGLL FLK SP D WT+ IR+P +RR GA+E + +MWR +K VA ++++P Q LSFS++EEHFY++QH A A++ + S TE K+ NSLL LRQACCHP IGS G+ + + ++MD++L L+ +++ EEA RK ++ LN A+A
Sbjct: 560 LITYDVILTTYDVLKEDLLHDSDRH-----DGGRHFM-------RFQKRYPVIPTPLTRIFWWRICLDEAQMVESNTAAASEMALRLPSIHRWCITGTPIQR-RLDDLYGLLKFLKISPFDVSRWWTEVIRDPYERRDSGAVEFTHKLFRRIMWRSSKIHVADELHLPSQEESLSYLSFSAIEEHFYQRQHETCADHARELIKNLKEDILKRKSPGSMSSTEASDTFITHAEAAKLLNSLLKLRQACCHPQIGSSGLRS-----------LQQSPMTMDEVLLVLVGKTKIEGEEALRKIVVALNGLAALA 846
BLAST of mRNA_Ecto-sp13_S_contig9957.21605.1 vs. uniprot
Match: A0A1Z5JRD4_FISSO (E3 ubiquitin-protein ligase SHPRH n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JRD4_FISSO) HSP 1 Score: 211 bits (536), Expect = 3.450e-55 Identity = 138/370 (37.30%), Postives = 202/370 (54.59%), Query Frame = 1
Query: 496 SRSSSDPFALLSPKNLASYDVVLTTFEVLRAEVHHAE-SRFAGALGDGGSAVAVGRPSLRRKKRRYRVIPSPLPALKWWRVVVDEAHMVESTTQETAKMALKIPATHRWCVTGTPIGKGSIDDLYGLLVFLKASPLDDKAVWTKAIREPIDRRLPGAMERLVSALKPVMWRVTKA--SVAAQINIPPQTCVDRRLSFSSVEEHFYRKQHRAAAADAQKTAREGGSGTEEKMFN------SLLALRQACCHPCIGSGGI------ETSGGGSRLGGGGAEGRWLSMDQILDRLIDAERLKAEEAQRKAILNLNASGAVARLVLQAKERRCDAASTAGAXXXXXXXXXETAETLLRDSVSSYQRALQMAEDN 1560
+R + LL PK LA+ D+VL TF+ L ++ H++ ++F + + ++ + SLRR+KR YRV+PSPL +++WWRV +DEA VE+ T +A+MALK+ A HRWCV+GTPIG+G ++DL+GLL+FL+ P A + K + + G R+ S L+ V WR TKA V Q+ +P Q L+FSSVE++FY +Q A +G + K+ L LR ACCHP +GS G+ + + G R ++M QIL R ID R K EE+QR IL+ N GA+ARL ++AK+R + AE LLR+S Y+ +L + E N
Sbjct: 658 ARKLDESIKLLHPKVLATADIVLMTFDALMGDLGHSDDNKFIASCEE--ESMFSSQCSLRRRKR-YRVVPSPLQSIEWWRVCLDEAQRVETPTAASARMALKLDAVHRWCVSGTPIGRGKLEDLFGLLLFLRVEPFCHPAWFKKCFGPSSPQSIIGC--RIASLLRHVFWRSTKALPCVREQMGVPEQAETKTILNFSSVEKYFYDRQLEETVALVGDVTERTKTGKKRKVVQIQVLTERLHKLRAACCHPQVGSSGLAHGTKRRWASPSNHESERGLASRVMTMSQILHRFIDDARQKCEESQRLVILHTNGMGAIARLKVEAKKRGIEV-------------RVSDAE-LLRESCRLYEESLALGEAN 1008 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9957.21605.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9957.21605.1 >prot_Ecto-sp13_S_contig9957.21605.1 ID=prot_Ecto-sp13_S_contig9957.21605.1|Name=mRNA_Ecto-sp13_S_contig9957.21605.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=522bp QVAVYNGVREILSFGEKAKLASSKRRLNKRRRSTNTTTTTTSGTGSRNSDback to top mRNA from alignment at Ecto-sp13_S_contig9957:210..6069+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9957.21605.1 ID=mRNA_Ecto-sp13_S_contig9957.21605.1|Name=mRNA_Ecto-sp13_S_contig9957.21605.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5860bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9957:210..6069+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9957:210..6069+ >mRNA_Ecto-sp13_S_contig9957.21605.1 ID=mRNA_Ecto-sp13_S_contig9957.21605.1|Name=mRNA_Ecto-sp13_S_contig9957.21605.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1566bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9957:210..6069+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |